
#==================================================
#All numbers are READ count
#==================================================

Total records:                          90

QC failed:                              0
Optical/PCR duplicate:                  0
Non primary hits                        0
Unmapped reads:                         1
mapq < mapq_cut (non-unique):           0

mapq >= mapq_cut (unique):              89
Read-1:                                 45
Read-2:                                 44
Reads map to '+':                       44
Reads map to '-':                       45
Non-splice reads:                       89
Splice reads:                           0
Reads mapped in proper pairs:           88
Proper-paired reads map to different chrom:0
