10 lines
407 B
Bash
10 lines
407 B
Bash
|
|
#!/bin/bash
|
||
|
|
|
||
|
|
# clone repo
|
||
|
|
if [ ! -d /tmp/agat_source ]; then
|
||
|
|
git clone --depth 1 --single-branch --branch master https://github.com/NBISweden/AGAT /tmp/agat_source
|
||
|
|
fi
|
||
|
|
|
||
|
|
# copy test data
|
||
|
|
cp -r /tmp/agat_source/t/scripts_output/in/test.mfannot src/agat/agat_convert_mfannot2gff/test_data/
|
||
|
|
cp -r /tmp/agat_source/t/scripts_output/out/agat_convert_mfannot2gff_1.gff src/agat/agat_convert_mfannot2gff/test_data/
|