Build branch main with version main (da414e7)
Build pipeline: viash-hub.biobox.main-7dwhr
Source commit: da414e72c6
Source message: Add star solo component (#62)
* add star solo component
* change arguments from camelCase to snake_case
* get rid of multiple_sep
* drop star_solo component and just add arguments to star_align_reads
* Update src/star/star_align_reads/script.py
Co-authored-by: Dries Schaumont <5946712+DriesSchaumont@users.noreply.github.com>
---------
Co-authored-by: Dries Schaumont <5946712+DriesSchaumont@users.noreply.github.com>
This commit is contained in:
@@ -1,5 +1,23 @@
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name: "fastp"
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version: "main"
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authors:
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- name: "Robrecht Cannoodt"
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roles:
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- "author"
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- "maintainer"
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info:
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links:
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email: "robrecht@data-intuitive.com"
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github: "rcannood"
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orcid: "0000-0003-3641-729X"
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linkedin: "robrechtcannoodt"
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organizations:
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- name: "Data Intuitive"
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href: "https://www.data-intuitive.com"
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role: "Data Science Engineer"
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- name: "Open Problems"
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href: "https://openproblems.bio"
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role: "Core Member"
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argument_groups:
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- name: "Inputs"
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description: "`fastp` supports both single-end (SE) and paired-end (PE) input.\n\
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@@ -1065,7 +1083,7 @@ build_info:
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output: "target/executable/fastp"
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executable: "target/executable/fastp/fastp"
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viash_version: "0.9.0-RC6"
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git_commit: "ec69d9af7a59c2618a49bef7d0bf9afc743ca065"
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git_commit: "da414e72c60758895b16818309d6c147c288dd84"
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git_remote: "https://github.com/viash-hub/biobox"
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package_config:
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name: "biobox"
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@@ -10,6 +10,9 @@
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# authors of this component should specify the license in the header of such
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# files, or include a separate license file detailing the licenses of all included
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# files.
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#
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# Component authors:
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# * Robrecht Cannoodt (author, maintainer)
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set -e
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@@ -1022,10 +1025,11 @@ FROM quay.io/biocontainers/fastp:0.23.4--hadf994f_2
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ENTRYPOINT []
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RUN fastp --version 2>&1 | sed 's# #: "#;s#$#"#' > /var/software_versions.txt
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LABEL org.opencontainers.image.authors="Robrecht Cannoodt"
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LABEL org.opencontainers.image.description="Companion container for running component fastp"
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LABEL org.opencontainers.image.created="2024-07-01T20:00:28Z"
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LABEL org.opencontainers.image.created="2024-07-29T07:58:04Z"
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LABEL org.opencontainers.image.source="https://github.com/OpenGene/fastp"
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LABEL org.opencontainers.image.revision="ec69d9af7a59c2618a49bef7d0bf9afc743ca065"
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LABEL org.opencontainers.image.revision="da414e72c60758895b16818309d6c147c288dd84"
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LABEL org.opencontainers.image.version="main"
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VIASHDOCKER
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