Build branch main with version main (7fb67a9)

Build pipeline: viash-hub.biobox.main-zbkpz

Source commit: 7fb67a9853

Source message: Add bbmap_bbsplit (#138)

* initial commit dedup

* Revert "initial commit dedup"

This reverts commit 38f586bec0ac9e4312b016e29c3aa0bd53f292b2.

* initial commit, complete config file, add test data

* complete config file, adjusted script and tests, not functional

* update changelog, hep.txt, functional test, large test data

* smaller test data

* remove test resource from config

* modify paths in test script

* Arguments closer to original tool's

* Extra arg to allow use of bbmap args
This commit is contained in:
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2024-10-18 11:59:11 +00:00
parent 55de3a494d
commit 0cdbd262c7
275 changed files with 8020 additions and 726 deletions

View File

@@ -184,6 +184,9 @@
* `bedtools`:
- `bedtools_getfasta`: extract sequences from a FASTA file for each of the
intervals defined in a BED/GFF/VCF file (PR #59).
* `bbmap`:
- `bbmap_bbsplit`: Split sequencing reads by mapping them to multiple references simultaneously (PR #138).