Build branch main with version main (124d50c)

Build pipeline: viash-hub.biobox.main-pjlfn Source commit: 124d50ce53 Source message: update changelog for viash 0.2.0
2024-09-16 08:16:27 +00:00
parent 97f1502b57
commit 4b61e09a56
241 changed files with 481 additions and 481 deletions
--- a/target/executable/agat/agat_convert_bed2gff/.config.vsh.yaml
+++ b/target/executable/agat/agat_convert_bed2gff/.config.vsh.yaml
@@ -235,8 +235,8 @@ build_info:
  output: "target/executable/agat/agat_convert_bed2gff"
  executable: "target/executable/agat/agat_convert_bed2gff/agat_convert_bed2gff"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/agat/agat_convert_bed2gff/agat_convert_bed2gff
+++ b/target/executable/agat/agat_convert_bed2gff/agat_convert_bed2gff
@@ -515,9 +515,9 @@ RUN agat --version | sed 's/AGAT\s\(.*\)/agat: "\1"/' > /var/software_versions.t

 LABEL org.opencontainers.image.authors="Leïla Paquay"
 LABEL org.opencontainers.image.description="Companion container for running component agat agat_convert_bed2gff"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:32Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:16Z"
 LABEL org.opencontainers.image.source="https://github.com/NBISweden/AGAT"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/agat/agat_convert_embl2gff/.config.vsh.yaml
+++ b/target/executable/agat/agat_convert_embl2gff/.config.vsh.yaml
@@ -225,8 +225,8 @@ build_info:
  output: "target/executable/agat/agat_convert_embl2gff"
  executable: "target/executable/agat/agat_convert_embl2gff/agat_convert_embl2gff"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/agat/agat_convert_embl2gff/agat_convert_embl2gff
+++ b/target/executable/agat/agat_convert_embl2gff/agat_convert_embl2gff
@@ -505,9 +505,9 @@ RUN agat --version | sed 's/AGAT\s\(.*\)/agat: "\1"/' > /var/software_versions.t

 LABEL org.opencontainers.image.authors="Leïla Paquay"
 LABEL org.opencontainers.image.description="Companion container for running component agat agat_convert_embl2gff"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:32Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:16Z"
 LABEL org.opencontainers.image.source="https://github.com/NBISweden/AGAT"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/agat/agat_convert_sp_gff2gtf/.config.vsh.yaml
+++ b/target/executable/agat/agat_convert_sp_gff2gtf/.config.vsh.yaml
@@ -228,8 +228,8 @@ build_info:
  output: "target/executable/agat/agat_convert_sp_gff2gtf"
  executable: "target/executable/agat/agat_convert_sp_gff2gtf/agat_convert_sp_gff2gtf"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/agat/agat_convert_sp_gff2gtf/agat_convert_sp_gff2gtf
+++ b/target/executable/agat/agat_convert_sp_gff2gtf/agat_convert_sp_gff2gtf
@@ -519,9 +519,9 @@ RUN agat --version | sed 's/AGAT\s\(.*\)/agat: "\1"/' > /var/software_versions.t

 LABEL org.opencontainers.image.authors="Leïla Paquay"
 LABEL org.opencontainers.image.description="Companion container for running component agat agat_convert_sp_gff2gtf"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:33Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:17Z"
 LABEL org.opencontainers.image.source="https://github.com/NBISweden/AGAT"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/agat/agat_convert_sp_gff2tsv/.config.vsh.yaml
+++ b/target/executable/agat/agat_convert_sp_gff2tsv/.config.vsh.yaml
@@ -188,8 +188,8 @@ build_info:
  output: "target/executable/agat/agat_convert_sp_gff2tsv"
  executable: "target/executable/agat/agat_convert_sp_gff2tsv/agat_convert_sp_gff2tsv"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/agat/agat_convert_sp_gff2tsv/agat_convert_sp_gff2tsv
+++ b/target/executable/agat/agat_convert_sp_gff2tsv/agat_convert_sp_gff2tsv
@@ -484,9 +484,9 @@ RUN agat --version | sed 's/AGAT\s\(.*\)/agat: "\1"/' > /var/software_versions.t

 LABEL org.opencontainers.image.authors="Leïla Paquay"
 LABEL org.opencontainers.image.description="Companion container for running component agat agat_convert_sp_gff2tsv"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:32Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:16Z"
 LABEL org.opencontainers.image.source="https://github.com/NBISweden/AGAT"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/agat/agat_convert_sp_gxf2gxf/.config.vsh.yaml
+++ b/target/executable/agat/agat_convert_sp_gxf2gxf/.config.vsh.yaml
@@ -195,8 +195,8 @@ build_info:
  output: "target/executable/agat/agat_convert_sp_gxf2gxf"
  executable: "target/executable/agat/agat_convert_sp_gxf2gxf/agat_convert_sp_gxf2gxf"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/agat/agat_convert_sp_gxf2gxf/agat_convert_sp_gxf2gxf
+++ b/target/executable/agat/agat_convert_sp_gxf2gxf/agat_convert_sp_gxf2gxf
@@ -493,9 +493,9 @@ RUN agat --version | sed 's/AGAT\s\(.*\)/agat: "\1"/' > /var/software_versions.t

 LABEL org.opencontainers.image.authors="Leïla Paquay"
 LABEL org.opencontainers.image.description="Companion container for running component agat agat_convert_sp_gxf2gxf"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:31Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:16Z"
 LABEL org.opencontainers.image.source="https://github.com/NBISweden/AGAT"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/arriba/.config.vsh.yaml
+++ b/target/executable/arriba/.config.vsh.yaml
@@ -706,8 +706,8 @@ build_info:
  output: "target/executable/arriba"
  executable: "target/executable/arriba/arriba"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/arriba/arriba
+++ b/target/executable/arriba/arriba
@@ -754,9 +754,9 @@ RUN arriba -h | grep 'Version:' 2>&1 |  sed 's/Version:\s\(.*\)/arriba: "\1"/' >

 LABEL org.opencontainers.image.authors="Robrecht Cannoodt"
 LABEL org.opencontainers.image.description="Companion container for running component arriba"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:34Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:19Z"
 LABEL org.opencontainers.image.source="https://github.com/suhrig/arriba"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/bcftools/bcftools_annotate/.config.vsh.yaml
+++ b/target/executable/bcftools/bcftools_annotate/.config.vsh.yaml
@@ -469,8 +469,8 @@ build_info:
  output: "target/executable/bcftools/bcftools_annotate"
  executable: "target/executable/bcftools/bcftools_annotate/bcftools_annotate"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/bcftools/bcftools_annotate/bcftools_annotate
+++ b/target/executable/bcftools/bcftools_annotate/bcftools_annotate
@@ -650,9 +650,9 @@ RUN echo "bcftools: \"$(bcftools --version | grep 'bcftools' | sed -n 's/^bcftoo

 LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
 LABEL org.opencontainers.image.description="Companion container for running component bcftools bcftools_annotate"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:26Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:10Z"
 LABEL org.opencontainers.image.source="https://github.com/samtools/bcftools"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/bcftools/bcftools_concat/.config.vsh.yaml
+++ b/target/executable/bcftools/bcftools_concat/.config.vsh.yaml
@@ -335,8 +335,8 @@ build_info:
  output: "target/executable/bcftools/bcftools_concat"
  executable: "target/executable/bcftools/bcftools_concat/bcftools_concat"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/bcftools/bcftools_concat/bcftools_concat
+++ b/target/executable/bcftools/bcftools_concat/bcftools_concat
@@ -566,9 +566,9 @@ RUN echo "bcftools: \"$(bcftools --version | grep 'bcftools' | sed -n 's/^bcftoo

 LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
 LABEL org.opencontainers.image.description="Companion container for running component bcftools bcftools_concat"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:26Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:10Z"
 LABEL org.opencontainers.image.source="https://github.com/samtools/bcftools"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/bcftools/bcftools_norm/.config.vsh.yaml
+++ b/target/executable/bcftools/bcftools_norm/.config.vsh.yaml
@@ -416,8 +416,8 @@ build_info:
  output: "target/executable/bcftools/bcftools_norm"
  executable: "target/executable/bcftools/bcftools_norm/bcftools_norm"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/bcftools/bcftools_norm/bcftools_norm
+++ b/target/executable/bcftools/bcftools_norm/bcftools_norm
@@ -589,9 +589,9 @@ RUN echo "bcftools: \"$(bcftools --version | grep 'bcftools' | sed -n 's/^bcftoo

 LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
 LABEL org.opencontainers.image.description="Companion container for running component bcftools bcftools_norm"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:27Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:11Z"
 LABEL org.opencontainers.image.source="https://github.com/samtools/bcftools"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/bcftools/bcftools_sort/.config.vsh.yaml
+++ b/target/executable/bcftools/bcftools_sort/.config.vsh.yaml
@@ -185,8 +185,8 @@ build_info:
  output: "target/executable/bcftools/bcftools_sort"
  executable: "target/executable/bcftools/bcftools_sort/bcftools_sort"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/bcftools/bcftools_sort/bcftools_sort
+++ b/target/executable/bcftools/bcftools_sort/bcftools_sort
@@ -483,9 +483,9 @@ RUN echo "bcftools: \"$(bcftools --version | grep 'bcftools' | sed -n 's/^bcftoo

 LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
 LABEL org.opencontainers.image.description="Companion container for running component bcftools bcftools_sort"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:25Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:09Z"
 LABEL org.opencontainers.image.source="https://github.com/samtools/bcftools"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/bcftools/bcftools_stats/.config.vsh.yaml
+++ b/target/executable/bcftools/bcftools_stats/.config.vsh.yaml
@@ -458,8 +458,8 @@ build_info:
  output: "target/executable/bcftools/bcftools_stats"
  executable: "target/executable/bcftools/bcftools_stats/bcftools_stats"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/bcftools/bcftools_stats/bcftools_stats
+++ b/target/executable/bcftools/bcftools_stats/bcftools_stats
@@ -626,9 +626,9 @@ RUN echo "bcftools: \"$(bcftools --version | grep 'bcftools' | sed -n 's/^bcftoo

 LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
 LABEL org.opencontainers.image.description="Companion container for running component bcftools bcftools_stats"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:26Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:10Z"
 LABEL org.opencontainers.image.source="https://github.com/samtools/bcftools"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/bcl_convert/.config.vsh.yaml
+++ b/target/executable/bcl_convert/.config.vsh.yaml
@@ -418,8 +418,8 @@ build_info:
  output: "target/executable/bcl_convert"
  executable: "target/executable/bcl_convert/bcl_convert"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/bcl_convert/bcl_convert
+++ b/target/executable/bcl_convert/bcl_convert
@@ -599,9 +599,9 @@ RUN echo "bcl-convert: \"$(bcl-convert -V 2>&1 >/dev/null | sed -n '/Version/ s/

 LABEL org.opencontainers.image.authors="Toni Verbeiren, Dorien Roosen"
 LABEL org.opencontainers.image.description="Companion container for running component bcl_convert"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:34Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:18Z"
 LABEL org.opencontainers.image.source="https://github.com/viash-hub/biobox"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/bd_rhapsody/bd_rhapsody_make_reference/.config.vsh.yaml
+++ b/target/executable/bd_rhapsody/bd_rhapsody_make_reference/.config.vsh.yaml
@@ -270,8 +270,8 @@ build_info:
  output: "target/executable/bd_rhapsody/bd_rhapsody_make_reference"
  executable: "target/executable/bd_rhapsody/bd_rhapsody_make_reference/bd_rhapsody_make_reference"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/bd_rhapsody/bd_rhapsody_make_reference/bd_rhapsody_make_reference
+++ b/target/executable/bd_rhapsody/bd_rhapsody_make_reference/bd_rhapsody_make_reference
@@ -549,9 +549,9 @@ RUN echo "bdgenomics/rhapsody: 2.2.1" > /var/software_versions.txt

 LABEL org.opencontainers.image.authors="Robrecht Cannoodt, Weiwei Schultz"
 LABEL org.opencontainers.image.description="Companion container for running component bd_rhapsody bd_rhapsody_make_reference"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:37Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:21Z"
 LABEL org.opencontainers.image.source="https://bitbucket.org/CRSwDev/cwl/src/master/v2.2.1/Extra_Utilities/"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/bedtools/bedtools_bamtofastq/.config.vsh.yaml
+++ b/target/executable/bedtools/bedtools_bamtofastq/.config.vsh.yaml
@@ -187,8 +187,8 @@ build_info:
  output: "target/executable/bedtools/bedtools_bamtofastq"
  executable: "target/executable/bedtools/bedtools_bamtofastq/bedtools_bamtofastq"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/bedtools/bedtools_bamtofastq/bedtools_bamtofastq
+++ b/target/executable/bedtools/bedtools_bamtofastq/bedtools_bamtofastq
@@ -483,9 +483,9 @@ RUN echo "bedtools: \"$(bedtools --version | sed -n 's/^bedtools //p')\"" > /var

 LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
 LABEL org.opencontainers.image.description="Companion container for running component bedtools bedtools_bamtofastq"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:18Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:02Z"
 LABEL org.opencontainers.image.source="https://github.com/arq5x/bedtools2"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/bedtools/bedtools_bed12tobed6/.config.vsh.yaml
+++ b/target/executable/bedtools/bedtools_bed12tobed6/.config.vsh.yaml
@@ -176,8 +176,8 @@ build_info:
  output: "target/executable/bedtools/bedtools_bed12tobed6"
  executable: "target/executable/bedtools/bedtools_bed12tobed6/bedtools_bed12tobed6"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/bedtools/bedtools_bed12tobed6/bedtools_bed12tobed6
+++ b/target/executable/bedtools/bedtools_bed12tobed6/bedtools_bed12tobed6
@@ -480,9 +480,9 @@ RUN echo "bedtools: \"$(bedtools --version | sed -n 's/^bedtools //p')\"" > /var

 LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
 LABEL org.opencontainers.image.description="Companion container for running component bedtools bedtools_bed12tobed6"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:16Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:01Z"
 LABEL org.opencontainers.image.source="https://github.com/arq5x/bedtools2"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/bedtools/bedtools_bedtobam/.config.vsh.yaml
+++ b/target/executable/bedtools/bedtools_bedtobam/.config.vsh.yaml
@@ -214,8 +214,8 @@ build_info:
  output: "target/executable/bedtools/bedtools_bedtobam"
  executable: "target/executable/bedtools/bedtools_bedtobam/bedtools_bedtobam"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/bedtools/bedtools_bedtobam/bedtools_bedtobam
+++ b/target/executable/bedtools/bedtools_bedtobam/bedtools_bedtobam
@@ -496,9 +496,9 @@ RUN echo "bedtools: \"$(bedtools --version | sed -n 's/^bedtools //p')\"" > /var

 LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
 LABEL org.opencontainers.image.description="Companion container for running component bedtools bedtools_bedtobam"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:19Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:03Z"
 LABEL org.opencontainers.image.source="https://github.com/arq5x/bedtools2"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/bedtools/bedtools_genomecov/.config.vsh.yaml
+++ b/target/executable/bedtools/bedtools_genomecov/.config.vsh.yaml
@@ -337,8 +337,8 @@ build_info:
  output: "target/executable/bedtools/bedtools_genomecov"
  executable: "target/executable/bedtools/bedtools_genomecov/bedtools_genomecov"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/bedtools/bedtools_genomecov/bedtools_genomecov
+++ b/target/executable/bedtools/bedtools_genomecov/bedtools_genomecov
@@ -591,9 +591,9 @@ RUN echo "bedtools: \"$(bedtools --version | sed -n 's/^bedtools //p')\"" > /var

 LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
 LABEL org.opencontainers.image.description="Companion container for running component bedtools bedtools_genomecov"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:16Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:00Z"
 LABEL org.opencontainers.image.source="https://github.com/arq5x/bedtools2"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/bedtools/bedtools_getfasta/.config.vsh.yaml
+++ b/target/executable/bedtools/bedtools_getfasta/.config.vsh.yaml
@@ -232,8 +232,8 @@ build_info:
  output: "target/executable/bedtools/bedtools_getfasta"
  executable: "target/executable/bedtools/bedtools_getfasta/bedtools_getfasta"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/bedtools/bedtools_getfasta/bedtools_getfasta
+++ b/target/executable/bedtools/bedtools_getfasta/bedtools_getfasta
@@ -526,9 +526,9 @@ RUN echo "bedtools: \"$(bedtools --version | sed -n 's/^bedtools //p')\"" > /var

 LABEL org.opencontainers.image.authors="Dries Schaumont"
 LABEL org.opencontainers.image.description="Companion container for running component bedtools bedtools_getfasta"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:17Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:01Z"
 LABEL org.opencontainers.image.source="https://github.com/arq5x/bedtools2"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/bedtools/bedtools_groupby/.config.vsh.yaml
+++ b/target/executable/bedtools/bedtools_groupby/.config.vsh.yaml
@@ -273,8 +273,8 @@ build_info:
  output: "target/executable/bedtools/bedtools_groupby"
  executable: "target/executable/bedtools/bedtools_groupby/bedtools_groupby"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/bedtools/bedtools_groupby/bedtools_groupby
+++ b/target/executable/bedtools/bedtools_groupby/bedtools_groupby
@@ -552,9 +552,9 @@ RUN echo "bedtools: \"$(bedtools --version | sed -n 's/^bedtools //p')\"" > /var

 LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
 LABEL org.opencontainers.image.description="Companion container for running component bedtools bedtools_groupby"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:18Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:02Z"
 LABEL org.opencontainers.image.source="https://github.com/arq5x/bedtools2"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/bedtools/bedtools_intersect/.config.vsh.yaml
+++ b/target/executable/bedtools/bedtools_intersect/.config.vsh.yaml
@@ -410,8 +410,8 @@ build_info:
  output: "target/executable/bedtools/bedtools_intersect"
  executable: "target/executable/bedtools/bedtools_intersect/bedtools_intersect"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/bedtools/bedtools_intersect/bedtools_intersect
+++ b/target/executable/bedtools/bedtools_intersect/bedtools_intersect
@@ -633,9 +633,9 @@ RUN echo "bedtools: \"$(bedtools --version | sed -n 's/^bedtools //p')\"" > /var

 LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
 LABEL org.opencontainers.image.description="Companion container for running component bedtools bedtools_intersect"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:17Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:01Z"
 LABEL org.opencontainers.image.source="https://github.com/arq5x/bedtools2"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/bedtools/bedtools_links/.config.vsh.yaml
+++ b/target/executable/bedtools/bedtools_links/.config.vsh.yaml
@@ -210,8 +210,8 @@ build_info:
  output: "target/executable/bedtools/bedtools_links"
  executable: "target/executable/bedtools/bedtools_links/bedtools_links"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/bedtools/bedtools_links/bedtools_links
+++ b/target/executable/bedtools/bedtools_links/bedtools_links
@@ -500,9 +500,9 @@ RUN echo "bedtools: \"$(bedtools --version | sed -n 's/^bedtools //p')\"" > /var

 LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
 LABEL org.opencontainers.image.description="Companion container for running component bedtools bedtools_links"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:18Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:02Z"
 LABEL org.opencontainers.image.source="https://github.com/arq5x/bedtools2"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/bedtools/bedtools_merge/.config.vsh.yaml
+++ b/target/executable/bedtools/bedtools_merge/.config.vsh.yaml
@@ -279,8 +279,8 @@ build_info:
  output: "target/executable/bedtools/bedtools_merge"
  executable: "target/executable/bedtools/bedtools_merge/bedtools_merge"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/bedtools/bedtools_merge/bedtools_merge
+++ b/target/executable/bedtools/bedtools_merge/bedtools_merge
@@ -558,9 +558,9 @@ RUN echo "bedtools: \"$(bedtools --version | sed -n 's/^bedtools //p')\"" > /var

 LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
 LABEL org.opencontainers.image.description="Companion container for running component bedtools bedtools_merge"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:16Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:00Z"
 LABEL org.opencontainers.image.source="https://github.com/arq5x/bedtools2"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/bedtools/bedtools_sort/.config.vsh.yaml
+++ b/target/executable/bedtools/bedtools_sort/.config.vsh.yaml
@@ -222,8 +222,8 @@ build_info:
  output: "target/executable/bedtools/bedtools_sort"
  executable: "target/executable/bedtools/bedtools_sort/bedtools_sort"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/bedtools/bedtools_sort/bedtools_sort
+++ b/target/executable/bedtools/bedtools_sort/bedtools_sort
@@ -509,9 +509,9 @@ RUN echo "bedtools: \"$(bedtools --version | sed -n 's/^bedtools //p')\"" > /var

 LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
 LABEL org.opencontainers.image.description="Companion container for running component bedtools bedtools_sort"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:18Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:03Z"
 LABEL org.opencontainers.image.source="https://github.com/arq5x/bedtools2"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/busco/busco_download_datasets/.config.vsh.yaml
+++ b/target/executable/busco/busco_download_datasets/.config.vsh.yaml
@@ -158,8 +158,8 @@ build_info:
  output: "target/executable/busco/busco_download_datasets"
  executable: "target/executable/busco/busco_download_datasets/busco_download_datasets"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/busco/busco_download_datasets/busco_download_datasets
+++ b/target/executable/busco/busco_download_datasets/busco_download_datasets
@@ -475,9 +475,9 @@ RUN busco --version | sed 's/BUSCO\s\(.*\)/busco: "\1"/' > /var/software_version

 LABEL org.opencontainers.image.authors="Dorien Roosen"
 LABEL org.opencontainers.image.description="Companion container for running component busco busco_download_datasets"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:30Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:14Z"
 LABEL org.opencontainers.image.source="https://gitlab.com/ezlab/busco"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/busco/busco_list_datasets/.config.vsh.yaml
+++ b/target/executable/busco/busco_list_datasets/.config.vsh.yaml
@@ -145,8 +145,8 @@ build_info:
  output: "target/executable/busco/busco_list_datasets"
  executable: "target/executable/busco/busco_list_datasets/busco_list_datasets"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/busco/busco_list_datasets/busco_list_datasets
+++ b/target/executable/busco/busco_list_datasets/busco_list_datasets
@@ -465,9 +465,9 @@ RUN busco --version | sed 's/BUSCO\s\(.*\)/busco: "\1"/' > /var/software_version

 LABEL org.opencontainers.image.authors="Dorien Roosen"
 LABEL org.opencontainers.image.description="Companion container for running component busco busco_list_datasets"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:30Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:14Z"
 LABEL org.opencontainers.image.source="https://gitlab.com/ezlab/busco"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/busco/busco_run/.config.vsh.yaml
+++ b/target/executable/busco/busco_run/.config.vsh.yaml
@@ -423,8 +423,8 @@ build_info:
  output: "target/executable/busco/busco_run"
  executable: "target/executable/busco/busco_run/busco_run"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/busco/busco_run/busco_run
+++ b/target/executable/busco/busco_run/busco_run
@@ -632,9 +632,9 @@ RUN busco --version | sed 's/BUSCO\s\(.*\)/busco: "\1"/' > /var/software_version

 LABEL org.opencontainers.image.authors="Dorien Roosen"
 LABEL org.opencontainers.image.description="Companion container for running component busco busco_run"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:30Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:14Z"
 LABEL org.opencontainers.image.source="https://gitlab.com/ezlab/busco"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/cutadapt/.config.vsh.yaml
+++ b/target/executable/cutadapt/.config.vsh.yaml
@@ -740,8 +740,8 @@ build_info:
  output: "target/executable/cutadapt"
  executable: "target/executable/cutadapt/cutadapt"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/cutadapt/cutadapt
+++ b/target/executable/cutadapt/cutadapt
@@ -831,9 +831,9 @@ RUN cutadapt --version | sed 's/\(.*\)/cutadapt: "\1"/' > /var/software_versions

 LABEL org.opencontainers.image.authors="Toni Verbeiren"
 LABEL org.opencontainers.image.description="Companion container for running component cutadapt"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:36Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:20Z"
 LABEL org.opencontainers.image.source="https://github.com/marcelm/cutadapt"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/falco/.config.vsh.yaml
+++ b/target/executable/falco/.config.vsh.yaml
@@ -317,8 +317,8 @@ build_info:
  output: "target/executable/falco"
  executable: "target/executable/falco/falco"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/falco/falco
+++ b/target/executable/falco/falco
@@ -589,9 +589,9 @@ RUN echo "falco: \"$(falco -v | sed -n 's/^falco //p')\"" > /var/software_versio

 LABEL org.opencontainers.image.authors="Toni Verbeiren"
 LABEL org.opencontainers.image.description="Companion container for running component falco"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:37Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:21Z"
 LABEL org.opencontainers.image.source="https://github.com/smithlabcode/falco"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/fastp/.config.vsh.yaml
+++ b/target/executable/fastp/.config.vsh.yaml
@@ -1083,8 +1083,8 @@ build_info:
  output: "target/executable/fastp"
  executable: "target/executable/fastp/fastp"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/fastp/fastp
+++ b/target/executable/fastp/fastp
@@ -1028,9 +1028,9 @@ RUN fastp --version 2>&1 | sed 's# #: "#;s#$#"#' > /var/software_versions.txt

 LABEL org.opencontainers.image.authors="Robrecht Cannoodt"
 LABEL org.opencontainers.image.description="Companion container for running component fastp"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:33Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:17Z"
 LABEL org.opencontainers.image.source="https://github.com/OpenGene/fastp"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/fastqc/.config.vsh.yaml
+++ b/target/executable/fastqc/.config.vsh.yaml
@@ -340,8 +340,8 @@ build_info:
  output: "target/executable/fastqc"
  executable: "target/executable/fastqc/fastqc"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/fastqc/fastqc
+++ b/target/executable/fastqc/fastqc
@@ -601,9 +601,9 @@ RUN echo "fastqc: $(fastqc --version | sed -n 's/^FastQC //p')" > /var/software_

 LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
 LABEL org.opencontainers.image.description="Companion container for running component fastqc"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:24Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:08Z"
 LABEL org.opencontainers.image.source="https://github.com/s-andrews/FastQC"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/featurecounts/.config.vsh.yaml
+++ b/target/executable/featurecounts/.config.vsh.yaml
@@ -645,8 +645,8 @@ build_info:
  output: "target/executable/featurecounts"
  executable: "target/executable/featurecounts/featurecounts"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/featurecounts/featurecounts
+++ b/target/executable/featurecounts/featurecounts
@@ -754,9 +754,9 @@ RUN featureCounts -v 2>&1 | sed 's/featureCounts v\([0-9.]*\)/featureCounts: \1/

 LABEL org.opencontainers.image.authors="Sai Nirmayi Yasa"
 LABEL org.opencontainers.image.description="Companion container for running component featurecounts"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:28Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:12Z"
 LABEL org.opencontainers.image.source="https://github.com/ShiLab-Bioinformatics/subread"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/fq_subsample/.config.vsh.yaml
+++ b/target/executable/fq_subsample/.config.vsh.yaml
@@ -190,8 +190,8 @@ build_info:
  output: "target/executable/fq_subsample"
  executable: "target/executable/fq_subsample/fq_subsample"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/fq_subsample/fq_subsample
+++ b/target/executable/fq_subsample/fq_subsample
@@ -493,9 +493,9 @@ mv target/release/fq /usr/local/bin/ && \
 cd / && rm -rf /fq

 LABEL org.opencontainers.image.description="Companion container for running component fq_subsample"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:23Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:07Z"
 LABEL org.opencontainers.image.source="https://github.com/stjude-rust-labs/fq"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/gffread/.config.vsh.yaml
+++ b/target/executable/gffread/.config.vsh.yaml
@@ -685,8 +685,8 @@ build_info:
  output: "target/executable/gffread"
  executable: "target/executable/gffread/gffread"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/gffread/gffread
+++ b/target/executable/gffread/gffread
@@ -807,9 +807,9 @@ RUN echo "gffread: \"$(gffread --version 2>&1)\"" > /var/software_versions.txt

 LABEL org.opencontainers.image.authors="Emma Rousseau"
 LABEL org.opencontainers.image.description="Companion container for running component gffread"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:15Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:54:59Z"
 LABEL org.opencontainers.image.source="https://github.com/gpertea/gffread"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/kallisto/kallisto_index/.config.vsh.yaml
+++ b/target/executable/kallisto/kallisto_index/.config.vsh.yaml
@@ -218,8 +218,8 @@ build_info:
  output: "target/executable/kallisto/kallisto_index"
  executable: "target/executable/kallisto/kallisto_index/kallisto_index"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/kallisto/kallisto_index/kallisto_index
+++ b/target/executable/kallisto/kallisto_index/kallisto_index
@@ -506,9 +506,9 @@ tar -xzf kallisto_linux-v0.50.1.tar.gz && \
 mv kallisto/kallisto /usr/local/bin/

 LABEL org.opencontainers.image.description="Companion container for running component kallisto kallisto_index"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:31Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:15Z"
 LABEL org.opencontainers.image.source="https://github.com/pachterlab/kallisto"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/lofreq/lofreq_call/.config.vsh.yaml
+++ b/target/executable/lofreq/lofreq_call/.config.vsh.yaml
@@ -507,8 +507,8 @@ build_info:
  output: "target/executable/lofreq/lofreq_call"
  executable: "target/executable/lofreq/lofreq_call/lofreq_call"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/lofreq/lofreq_call/lofreq_call
+++ b/target/executable/lofreq/lofreq_call/lofreq_call
@@ -656,9 +656,9 @@ echo "lofreq: $version" > /var/software_versions.txt

 LABEL org.opencontainers.image.authors="Kai Waldrant"
 LABEL org.opencontainers.image.description="Companion container for running component lofreq lofreq_call"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:27Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:12Z"
 LABEL org.opencontainers.image.source="https://github.com/viash-hub/biobox"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/lofreq/lofreq_indelqual/.config.vsh.yaml
+++ b/target/executable/lofreq/lofreq_indelqual/.config.vsh.yaml
@@ -215,8 +215,8 @@ build_info:
  output: "target/executable/lofreq/lofreq_indelqual"
  executable: "target/executable/lofreq/lofreq_indelqual/lofreq_indelqual"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/lofreq/lofreq_indelqual/lofreq_indelqual
+++ b/target/executable/lofreq/lofreq_indelqual/lofreq_indelqual
@@ -501,9 +501,9 @@ echo "lofreq: $version" > /var/software_versions.txt

 LABEL org.opencontainers.image.authors="Kai Waldrant"
 LABEL org.opencontainers.image.description="Companion container for running component lofreq lofreq_indelqual"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:27Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:11Z"
 LABEL org.opencontainers.image.source="https://github.com/viash-hub/biobox"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/multiqc/.config.vsh.yaml
+++ b/target/executable/multiqc/.config.vsh.yaml
@@ -456,8 +456,8 @@ build_info:
  output: "target/executable/multiqc"
  executable: "target/executable/multiqc/multiqc"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/multiqc/multiqc
+++ b/target/executable/multiqc/multiqc
@@ -637,9 +637,9 @@ RUN multiqc --version | sed 's/multiqc, version\s\(.*\)/multiqc: "\1"/' > /var/s

 LABEL org.opencontainers.image.authors="Dorien Roosen"
 LABEL org.opencontainers.image.description="Companion container for running component multiqc"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:36Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:20Z"
 LABEL org.opencontainers.image.source="https://github.com/viash-hub/biobox"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/pear/.config.vsh.yaml
+++ b/target/executable/pear/.config.vsh.yaml
@@ -398,8 +398,8 @@ build_info:
  output: "target/executable/pear"
  executable: "target/executable/pear/pear"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/pear/pear
+++ b/target/executable/pear/pear
@@ -597,9 +597,9 @@ echo "pear: $version" > /var/software_versions.txt

 LABEL org.opencontainers.image.authors="Kai Waldrant"
 LABEL org.opencontainers.image.description="Companion container for running component pear"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:19Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:03Z"
 LABEL org.opencontainers.image.source="https://github.com/tseemann/PEAR"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/qualimap/qualimap_rnaseq/.config.vsh.yaml
+++ b/target/executable/qualimap/qualimap_rnaseq/.config.vsh.yaml
@@ -264,8 +264,8 @@ build_info:
  output: "target/executable/qualimap/qualimap_rnaseq"
  executable: "target/executable/qualimap/qualimap_rnaseq/qualimap_rnaseq"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/qualimap/qualimap_rnaseq/qualimap_rnaseq
+++ b/target/executable/qualimap/qualimap_rnaseq/qualimap_rnaseq
@@ -527,9 +527,9 @@ RUN echo QualiMap: $(qualimap 2>&1 | grep QualiMap | sed 's/^.*QualiMap//') > /v

 LABEL org.opencontainers.image.authors="Dorien Roosen"
 LABEL org.opencontainers.image.description="Companion container for running component qualimap qualimap_rnaseq"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:23Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:07Z"
 LABEL org.opencontainers.image.source="https://bitbucket.org/kokonech/qualimap/commits/branch/master"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/rsem/rsem_prepare_reference/.config.vsh.yaml
+++ b/target/executable/rsem/rsem_prepare_reference/.config.vsh.yaml
@@ -416,8 +416,8 @@ build_info:
  output: "target/executable/rsem/rsem_prepare_reference"
  executable: "target/executable/rsem/rsem_prepare_reference/rsem_prepare_reference"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/rsem/rsem_prepare_reference/rsem_prepare_reference
+++ b/target/executable/rsem/rsem_prepare_reference/rsem_prepare_reference
@@ -656,9 +656,9 @@ echo "HISAT2: `hisat2 --version | grep -oP 'hisat2-align-s version \K\d+\.\d+\.\

 LABEL org.opencontainers.image.authors="Sai Nirmayi Yasa"
 LABEL org.opencontainers.image.description="Companion container for running component rsem rsem_prepare_reference"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:31Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:15Z"
 LABEL org.opencontainers.image.source="https://github.com/deweylab/RSEM"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/salmon/salmon_index/.config.vsh.yaml
+++ b/target/executable/salmon/salmon_index/.config.vsh.yaml
@@ -277,8 +277,8 @@ build_info:
  output: "target/executable/salmon/salmon_index"
  executable: "target/executable/salmon/salmon_index/salmon_index"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/salmon/salmon_index/salmon_index
+++ b/target/executable/salmon/salmon_index/salmon_index
@@ -546,9 +546,9 @@ RUN salmon index -v 2>&1 | sed 's/salmon \([0-9.]*\)/salmon: \1/' > /var/softwar

 LABEL org.opencontainers.image.authors="Sai Nirmayi Yasa"
 LABEL org.opencontainers.image.description="Companion container for running component salmon salmon_index"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:35Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:19Z"
 LABEL org.opencontainers.image.source="https://github.com/COMBINE-lab/salmon"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/salmon/salmon_quant/.config.vsh.yaml
+++ b/target/executable/salmon/salmon_quant/.config.vsh.yaml
@@ -1173,8 +1173,8 @@ build_info:
  output: "target/executable/salmon/salmon_quant"
  executable: "target/executable/salmon/salmon_quant/salmon_quant"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/salmon/salmon_quant/salmon_quant
+++ b/target/executable/salmon/salmon_quant/salmon_quant
@@ -1168,9 +1168,9 @@ RUN salmon index -v 2>&1 | sed 's/salmon \([0-9.]*\)/salmon: \1/' > /var/softwar

 LABEL org.opencontainers.image.authors="Sai Nirmayi Yasa"
 LABEL org.opencontainers.image.description="Companion container for running component salmon salmon_quant"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:35Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:19Z"
 LABEL org.opencontainers.image.source="https://github.com/COMBINE-lab/salmon"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/samtools/samtools_collate/.config.vsh.yaml
+++ b/target/executable/samtools/samtools_collate/.config.vsh.yaml
@@ -264,8 +264,8 @@ build_info:
  output: "target/executable/samtools/samtools_collate"
  executable: "target/executable/samtools/samtools_collate/samtools_collate"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/samtools/samtools_collate/samtools_collate
+++ b/target/executable/samtools/samtools_collate/samtools_collate
@@ -519,9 +519,9 @@ sed 's#Using ##;s# \([0-9\.]*\)$#: \1#' > /var/software_versions.txt

 LABEL org.opencontainers.image.authors="Emma Rousseau"
 LABEL org.opencontainers.image.description="Companion container for running component samtools samtools_collate"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:22Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:06Z"
 LABEL org.opencontainers.image.source="https://github.com/samtools/samtools"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/samtools/samtools_faidx/.config.vsh.yaml
+++ b/target/executable/samtools/samtools_faidx/.config.vsh.yaml
@@ -243,8 +243,8 @@ build_info:
  output: "target/executable/samtools/samtools_faidx"
  executable: "target/executable/samtools/samtools_faidx/samtools_faidx"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/samtools/samtools_faidx/samtools_faidx
+++ b/target/executable/samtools/samtools_faidx/samtools_faidx
@@ -512,9 +512,9 @@ sed 's#Using ##;s# \([0-9\.]*\)$#: \1#' > /var/software_versions.txt

 LABEL org.opencontainers.image.authors="Emma Rousseau"
 LABEL org.opencontainers.image.description="Companion container for running component samtools samtools_faidx"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:21Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:05Z"
 LABEL org.opencontainers.image.source="https://github.com/samtools/samtools"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/samtools/samtools_fasta/.config.vsh.yaml
+++ b/target/executable/samtools/samtools_fasta/.config.vsh.yaml
@@ -433,8 +433,8 @@ build_info:
  output: "target/executable/samtools/samtools_fasta"
  executable: "target/executable/samtools/samtools_fasta/samtools_fasta"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/samtools/samtools_fasta/samtools_fasta
+++ b/target/executable/samtools/samtools_fasta/samtools_fasta
@@ -625,9 +625,9 @@ sed 's#Using ##;s# \([0-9\.]*\)$#: \1#' > /var/software_versions.txt

 LABEL org.opencontainers.image.authors="Emma Rousseau"
 LABEL org.opencontainers.image.description="Companion container for running component samtools samtools_fasta"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:22Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:06Z"
 LABEL org.opencontainers.image.source="https://github.com/samtools/samtools"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/samtools/samtools_fastq/.config.vsh.yaml
+++ b/target/executable/samtools/samtools_fastq/.config.vsh.yaml
@@ -433,8 +433,8 @@ build_info:
  output: "target/executable/samtools/samtools_fastq"
  executable: "target/executable/samtools/samtools_fastq/samtools_fastq"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/samtools/samtools_fastq/samtools_fastq
+++ b/target/executable/samtools/samtools_fastq/samtools_fastq
@@ -626,9 +626,9 @@ sed 's#Using ##;s# \([0-9\.]*\)$#: \1#' > /var/software_versions.txt

 LABEL org.opencontainers.image.authors="Emma Rousseau"
 LABEL org.opencontainers.image.description="Companion container for running component samtools samtools_fastq"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:21Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:05Z"
 LABEL org.opencontainers.image.source="https://github.com/samtools/samtools"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/samtools/samtools_flagstat/.config.vsh.yaml
+++ b/target/executable/samtools/samtools_flagstat/.config.vsh.yaml
@@ -173,8 +173,8 @@ build_info:
  output: "target/executable/samtools/samtools_flagstat"
  executable: "target/executable/samtools/samtools_flagstat/samtools_flagstat"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/samtools/samtools_flagstat/samtools_flagstat
+++ b/target/executable/samtools/samtools_flagstat/samtools_flagstat
@@ -474,9 +474,9 @@ sed 's#Using ##;s# \([0-9\.]*\)$#: \1#' > /var/software_versions.txt

 LABEL org.opencontainers.image.authors="Emma Rousseau"
 LABEL org.opencontainers.image.description="Companion container for running component samtools samtools_flagstat"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:21Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:05Z"
 LABEL org.opencontainers.image.source="https://github.com/samtools/samtools"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/samtools/samtools_idxstats/.config.vsh.yaml
+++ b/target/executable/samtools/samtools_idxstats/.config.vsh.yaml
@@ -183,8 +183,8 @@ build_info:
  output: "target/executable/samtools/samtools_idxstats"
  executable: "target/executable/samtools/samtools_idxstats/samtools_idxstats"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/samtools/samtools_idxstats/samtools_idxstats
+++ b/target/executable/samtools/samtools_idxstats/samtools_idxstats
@@ -478,9 +478,9 @@ sed 's#Using ##;s# \([0-9\.]*\)$#: \1#' > /var/software_versions.txt

 LABEL org.opencontainers.image.authors="Emma Rousseau"
 LABEL org.opencontainers.image.description="Companion container for running component samtools samtools_idxstats"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:20Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:04Z"
 LABEL org.opencontainers.image.source="https://github.com/samtools/samtools"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/samtools/samtools_index/.config.vsh.yaml
+++ b/target/executable/samtools/samtools_index/.config.vsh.yaml
@@ -189,8 +189,8 @@ build_info:
  output: "target/executable/samtools/samtools_index"
  executable: "target/executable/samtools/samtools_index/samtools_index"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/samtools/samtools_index/samtools_index
+++ b/target/executable/samtools/samtools_index/samtools_index
@@ -485,9 +485,9 @@ sed 's#Using ##;s# \([0-9\.]*\)$#: \1#' > /var/software_versions.txt

 LABEL org.opencontainers.image.authors="Emma Rousseau"
 LABEL org.opencontainers.image.description="Companion container for running component samtools samtools_index"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:19Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:04Z"
 LABEL org.opencontainers.image.source="https://github.com/samtools/samtools"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/target/executable/samtools/samtools_sort/.config.vsh.yaml
+++ b/target/executable/samtools/samtools_sort/.config.vsh.yaml
@@ -332,8 +332,8 @@ build_info:
  output: "target/executable/samtools/samtools_sort"
  executable: "target/executable/samtools/samtools_sort/samtools_sort"
  viash_version: "0.9.0-RC7"
-  git_commit: "fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
-  git_remote: "https://github.com/viash-hub/biobox"
+  git_commit: "124d50ce5318b612e4a1e4da1be705523cd6eab7"
+  git_remote: "https://x-access-token:ghs_royCfknE2TdPwJPOM1bW31Qho8HPrM4SPutG@github.com/viash-hub/biobox"
 package_config:
  name: "biobox"
  version: "main"
--- a/target/executable/samtools/samtools_sort/samtools_sort
+++ b/target/executable/samtools/samtools_sort/samtools_sort
@@ -556,9 +556,9 @@ sed 's#Using ##;s# \([0-9\.]*\)$#: \1#' > /var/software_versions.txt

 LABEL org.opencontainers.image.authors="Emma Rousseau"
 LABEL org.opencontainers.image.description="Companion container for running component samtools samtools_sort"
-LABEL org.opencontainers.image.created="2024-09-13T07:20:22Z"
+LABEL org.opencontainers.image.created="2024-09-16T07:55:06Z"
 LABEL org.opencontainers.image.source="https://github.com/samtools/samtools"
-LABEL org.opencontainers.image.revision="fe56ee7c53ca30f25aa31cb9a025e17cd75b636e"
+LABEL org.opencontainers.image.revision="124d50ce5318b612e4a1e4da1be705523cd6eab7"
 LABEL org.opencontainers.image.version="main"

 VIASHDOCKER
--- a/Show More
+++ b/Show More