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Build branch main with version main (4aa0a89)

Browse Source 
Build pipeline: viash-hub.biobox.main-rgg5q

Source commit: 4aa0a893d2

Source message: Add agat convert bed2gff (#97)

* add config

* add help

* add script

* add test data and expected output file

* add script to get test data

* add tests

* update changelog

* fix path to test data

---------

Co-authored-by: Robrecht Cannoodt <rcannood@gmail.com>
This commit is contained in:
CI
2024-07-31 19:45:06 +00:00
parent da141b5d98
commit 833a44f68a
166 changed files with 6004 additions and 1832 deletions
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2
target/executable/bedtools/bedtools_intersect/.config.vsh.yaml
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@@ -410,7 +410,7 @@ build_info:
output: "target/executable/bedtools/bedtools_intersect"
executable: "target/executable/bedtools/bedtools_intersect/bedtools_intersect"
viash_version: "0.9.0-RC6"
git_commit: "de8b4248b64e0d2e04a6f20c35212403c57a1058"
git_commit: "4aa0a893d2f8be5f0d03797afc15a04c53664367"
git_remote: "https://github.com/viash-hub/biobox"
package_config:
name: "biobox"

4
target/executable/bedtools/bedtools_intersect/bedtools_intersect
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@@ -632,9 +632,9 @@ RUN echo "bedtools: \"$(bedtools --version | sed -n 's/^bedtools //p')\"" > /var
LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
LABEL org.opencontainers.image.description="Companion container for running component bedtools bedtools_intersect"
LABEL org.opencontainers.image.created="2024-07-31T19:24:18Z"
LABEL org.opencontainers.image.created="2024-07-31T19:27:35Z"
LABEL org.opencontainers.image.source="https://github.com/arq5x/bedtools2"
LABEL org.opencontainers.image.revision="de8b4248b64e0d2e04a6f20c35212403c57a1058"
LABEL org.opencontainers.image.revision="4aa0a893d2f8be5f0d03797afc15a04c53664367"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER