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Build branch main with version main (3481750)

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Build pipeline: viash-hub.biobox.main-2mtst

Source commit: 3481750f6e

Source message: Output alignments to the transcriptome (#56)

* Output alignments to  the transcriptome

* Change argument name
This commit is contained in:
CI
2024-06-24 09:29:59 +00:00
parent 9c30676332
commit 9747a7a8d9
117 changed files with 243 additions and 286 deletions
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2
target/executable/salmon/salmon_index/.config.vsh.yaml
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@@ -263,7 +263,7 @@ build_info:
output: "target/executable/salmon/salmon_index"
executable: "target/executable/salmon/salmon_index/salmon_index"
viash_version: "0.9.0-RC6"
git_commit: "d0c648fb7eefe067f5b5b3d402a204354bb37198"
git_commit: "3481750f6e2d77defa28423d832ff251da3a1f9e"
git_remote: "https://github.com/viash-hub/biobox"
package_config:
name: "biobox"

4
target/executable/salmon/salmon_index/salmon_index
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@@ -541,9 +541,9 @@ ENTRYPOINT []
RUN salmon index -v 2>&1 | sed 's/salmon \([0-9.]*\)/salmon: \1/' > /var/software_versions.txt
LABEL org.opencontainers.image.description="Companion container for running component salmon salmon_index"
LABEL org.opencontainers.image.created="2024-06-24T08:36:42Z"
LABEL org.opencontainers.image.created="2024-06-24T09:14:58Z"
LABEL org.opencontainers.image.source="https://github.com/COMBINE-lab/salmon"
LABEL org.opencontainers.image.revision="d0c648fb7eefe067f5b5b3d402a204354bb37198"
LABEL org.opencontainers.image.revision="3481750f6e2d77defa28423d832ff251da3a1f9e"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER

2
target/executable/salmon/salmon_quant/.config.vsh.yaml
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@@ -1159,7 +1159,7 @@ build_info:
output: "target/executable/salmon/salmon_quant"
executable: "target/executable/salmon/salmon_quant/salmon_quant"
viash_version: "0.9.0-RC6"
git_commit: "d0c648fb7eefe067f5b5b3d402a204354bb37198"
git_commit: "3481750f6e2d77defa28423d832ff251da3a1f9e"
git_remote: "https://github.com/viash-hub/biobox"
package_config:
name: "biobox"

4
target/executable/salmon/salmon_quant/salmon_quant
View File

@@ -1163,9 +1163,9 @@ ENTRYPOINT []
RUN salmon index -v 2>&1 | sed 's/salmon \([0-9.]*\)/salmon: \1/' > /var/software_versions.txt
LABEL org.opencontainers.image.description="Companion container for running component salmon salmon_quant"
LABEL org.opencontainers.image.created="2024-06-24T08:36:42Z"
LABEL org.opencontainers.image.created="2024-06-24T09:14:57Z"
LABEL org.opencontainers.image.source="https://github.com/COMBINE-lab/salmon"
LABEL org.opencontainers.image.revision="d0c648fb7eefe067f5b5b3d402a204354bb37198"
LABEL org.opencontainers.image.revision="3481750f6e2d77defa28423d832ff251da3a1f9e"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER