Build branch main with version main (80aaf33)

Build pipeline: viash-hub.biobox.main-69lmq

Source commit: 80aaf333dc

Source message: Add Kallisto index (#149)

CHANGELOG.md

@@ -137,7 +137,8 @@
     - `samtools/samtools_fastq`: Converts a SAM/BAM/CRAM file to FASTA (PR #53).
 
 * `umi_tools`:
-    -`umi_tools/umi_tools_extract`: Flexible removal of UMI sequences from fastq reads (PR #71).
+    - `umi_tools/umi_tools_extract`: Flexible removal of UMI sequences from fastq reads (PR #71).
+    - `umi_tools/umi_tools_prepareforrsem`: Fix paired-end reads in name sorted BAM file to prepare for RSEM (PR #148).
 
 * `falco`: A C++ drop-in replacement of FastQC to assess the quality of sequence read data (PR #43).
 
@@ -148,7 +149,11 @@
 * `sortmerna`: Local sequence alignment tool for mapping, clustering, and filtering rRNA from metatranscriptomic 
                data. (PR #146)
 
-*  `fq_subsample`: Sample a subset of records from single or paired FASTQ files (PR #147).
+* `fq_subsample`: Sample a subset of records from single or paired FASTQ files (PR #147).
+
+* `kallisto`:
+    - `kallisto_index`: Create a kallisto index (PR #149).
+
 
 ## MINOR CHANGES