Build branch v0.2 with version 0.2.0 (5526b3e)
Build pipeline: viash-hub.biobox.v0.2-zzqh5
Source commit: 5526b3e939
Source message: Release v0.2.0
This commit is contained in:
@@ -1,6 +1,6 @@
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name: "bcftools_sort"
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namespace: "bcftools"
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version: "v0.2"
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version: "0.2.0"
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authors:
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- name: "Theodoro Gasperin Terra Camargo"
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roles:
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@@ -162,7 +162,7 @@ engines:
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id: "docker"
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image: "debian:stable-slim"
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target_registry: "images.viash-hub.com"
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target_tag: "v0.2"
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target_tag: "0.2.0"
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namespace_separator: "/"
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setup:
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- type: "apt"
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@@ -184,22 +184,22 @@ build_info:
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engine: "docker|native"
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output: "target/executable/bcftools/bcftools_sort"
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executable: "target/executable/bcftools/bcftools_sort/bcftools_sort"
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viash_version: "0.9.0-RC7"
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git_commit: "f22ab0eab58dcd6bff89d8d73fe951953ff1260f"
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viash_version: "0.9.0"
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git_commit: "5526b3e939030daea80595fa98387b469329bbfa"
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git_remote: "https://github.com/viash-hub/biobox"
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package_config:
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name: "biobox"
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version: "v0.2"
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version: "0.2.0"
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description: "A collection of bioinformatics tools for working with sequence data.\n"
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info: null
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viash_version: "0.9.0-RC7"
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viash_version: "0.9.0"
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source: "src"
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target: "target"
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config_mods:
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- ".requirements.commands := ['ps']\n"
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- ".engines += { type: \"native\" }"
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- ".engines[.type == 'docker'].target_registry := 'images.viash-hub.com'"
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- ".engines[.type == 'docker'].target_tag := 'v0.2'"
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- ".engines[.type == 'docker'].target_tag := '0.2.0'"
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keywords:
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- "bioinformatics"
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- "modules"
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@@ -1,10 +1,10 @@
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#!/usr/bin/env bash
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# bcftools_sort v0.2
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# bcftools_sort 0.2.0
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#
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# This wrapper script is auto-generated by viash 0.9.0-RC7 and is thus a
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# derivative work thereof. This software comes with ABSOLUTELY NO WARRANTY from
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# Data Intuitive.
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# This wrapper script is auto-generated by viash 0.9.0 and is thus a derivative
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# work thereof. This software comes with ABSOLUTELY NO WARRANTY from Data
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# Intuitive.
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#
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# The component may contain files which fall under a different license. The
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# authors of this component should specify the license in the header of such
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@@ -174,7 +174,7 @@ VIASH_META_TEMP_DIR="$VIASH_TEMP"
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# ViashHelp: Display helpful explanation about this executable
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function ViashHelp {
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echo "bcftools_sort v0.2"
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echo "bcftools_sort 0.2.0"
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echo ""
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echo "Sorts VCF/BCF files."
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echo ""
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@@ -483,10 +483,10 @@ RUN echo "bcftools: \"$(bcftools --version | grep 'bcftools' | sed -n 's/^bcftoo
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LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
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LABEL org.opencontainers.image.description="Companion container for running component bcftools bcftools_sort"
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LABEL org.opencontainers.image.created="2024-09-12T12:36:17Z"
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LABEL org.opencontainers.image.created="2024-09-12T13:23:18Z"
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LABEL org.opencontainers.image.source="https://github.com/samtools/bcftools"
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LABEL org.opencontainers.image.revision="f22ab0eab58dcd6bff89d8d73fe951953ff1260f"
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LABEL org.opencontainers.image.version="v0.2"
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LABEL org.opencontainers.image.revision="5526b3e939030daea80595fa98387b469329bbfa"
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LABEL org.opencontainers.image.version="0.2.0"
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VIASHDOCKER
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fi
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@@ -622,7 +622,7 @@ while [[ $# -gt 0 ]]; do
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shift 1
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;;
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--version)
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echo "bcftools_sort v0.2"
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echo "bcftools_sort 0.2.0"
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exit
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;;
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--input)
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@@ -764,7 +764,7 @@ if [[ "$VIASH_ENGINE_TYPE" == "docker" ]]; then
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# determine docker image id
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if [[ "$VIASH_ENGINE_ID" == 'docker' ]]; then
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VIASH_DOCKER_IMAGE_ID='images.viash-hub.com/vsh/biobox/bcftools/bcftools_sort:v0.2'
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VIASH_DOCKER_IMAGE_ID='images.viash-hub.com/vsh/biobox/bcftools/bcftools_sort:0.2.0'
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fi
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# print dockerfile
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