Build branch v0.2 with version v0.2.0 (7e53021)

Build pipeline: viash-hub.biobox.v0.2-tj6l9

Source commit: 7e53021884

Source message: Fix version number and re-release v0.2.0
This commit is contained in:
CI
2024-09-13 12:51:22 +00:00
parent cdb68529f2
commit cf30ed31f6
257 changed files with 1431 additions and 1431 deletions

View File

@@ -1,6 +1,6 @@
name: "bedtools_getfasta"
namespace: "bedtools"
version: "0.2.0"
version: "v0.2.0"
authors:
- name: "Dries Schaumont"
roles:
@@ -209,7 +209,7 @@ engines:
id: "docker"
image: "debian:stable-slim"
target_registry: "images.viash-hub.com"
target_tag: "0.2.0"
target_tag: "v0.2.0"
namespace_separator: "/"
setup:
- type: "apt"
@@ -232,11 +232,11 @@ build_info:
output: "target/executable/bedtools/bedtools_getfasta"
executable: "target/executable/bedtools/bedtools_getfasta/bedtools_getfasta"
viash_version: "0.9.0"
git_commit: "5526b3e939030daea80595fa98387b469329bbfa"
git_remote: "https://github.com/viash-hub/biobox"
git_commit: "7e530218844c373048bc33de58f021b6460642e5"
git_remote: "https://x-access-token:ghs_kiUBq39QrAlnG6IaeAcTcXhllzqpOV4LDB3e@github.com/viash-hub/biobox"
package_config:
name: "biobox"
version: "0.2.0"
version: "v0.2.0"
description: "A collection of bioinformatics tools for working with sequence data.\n"
info: null
viash_version: "0.9.0"
@@ -246,7 +246,7 @@ package_config:
- ".requirements.commands := ['ps']\n"
- ".engines += { type: \"native\" }"
- ".engines[.type == 'docker'].target_registry := 'images.viash-hub.com'"
- ".engines[.type == 'docker'].target_tag := '0.2.0'"
- ".engines[.type == 'docker'].target_tag := 'v0.2.0'"
keywords:
- "bioinformatics"
- "modules"

View File

@@ -1,6 +1,6 @@
#!/usr/bin/env bash
# bedtools_getfasta 0.2.0
# bedtools_getfasta v0.2.0
#
# This wrapper script is auto-generated by viash 0.9.0 and is thus a derivative
# work thereof. This software comes with ABSOLUTELY NO WARRANTY from Data
@@ -174,7 +174,7 @@ VIASH_META_TEMP_DIR="$VIASH_TEMP"
# ViashHelp: Display helpful explanation about this executable
function ViashHelp {
echo "bedtools_getfasta 0.2.0"
echo "bedtools_getfasta v0.2.0"
echo ""
echo "Extract sequences from a FASTA file for each of the intervals defined in a"
echo "BED/GFF/VCF file."
@@ -526,10 +526,10 @@ RUN echo "bedtools: \"$(bedtools --version | sed -n 's/^bedtools //p')\"" > /var
LABEL org.opencontainers.image.authors="Dries Schaumont"
LABEL org.opencontainers.image.description="Companion container for running component bedtools bedtools_getfasta"
LABEL org.opencontainers.image.created="2024-09-12T13:23:11Z"
LABEL org.opencontainers.image.created="2024-09-13T12:35:06Z"
LABEL org.opencontainers.image.source="https://github.com/arq5x/bedtools2"
LABEL org.opencontainers.image.revision="5526b3e939030daea80595fa98387b469329bbfa"
LABEL org.opencontainers.image.version="0.2.0"
LABEL org.opencontainers.image.revision="7e530218844c373048bc33de58f021b6460642e5"
LABEL org.opencontainers.image.version="v0.2.0"
VIASHDOCKER
fi
@@ -665,7 +665,7 @@ while [[ $# -gt 0 ]]; do
shift 1
;;
--version)
echo "bedtools_getfasta 0.2.0"
echo "bedtools_getfasta v0.2.0"
exit
;;
--input_fasta)
@@ -840,7 +840,7 @@ if [[ "$VIASH_ENGINE_TYPE" == "docker" ]]; then
# determine docker image id
if [[ "$VIASH_ENGINE_ID" == 'docker' ]]; then
VIASH_DOCKER_IMAGE_ID='images.viash-hub.com/vsh/biobox/bedtools/bedtools_getfasta:0.2.0'
VIASH_DOCKER_IMAGE_ID='images.viash-hub.com/vsh/biobox/bedtools/bedtools_getfasta:v0.2.0'
fi
# print dockerfile