Build branch v0.2 with version v0.2.0 (7e53021)

Build pipeline: viash-hub.biobox.v0.2-tj6l9

Source commit: 7e53021884

Source message: Fix version number and re-release v0.2.0
This commit is contained in:
CI
2024-09-13 12:51:22 +00:00
parent cdb68529f2
commit cf30ed31f6
257 changed files with 1431 additions and 1431 deletions

View File

@@ -1,6 +1,6 @@
name: "samtools_collate"
namespace: "samtools"
version: "0.2.0"
version: "v0.2.0"
authors:
- name: "Emma Rousseau"
roles:
@@ -246,7 +246,7 @@ engines:
id: "docker"
image: "quay.io/biocontainers/samtools:1.19.2--h50ea8bc_1"
target_registry: "images.viash-hub.com"
target_tag: "0.2.0"
target_tag: "v0.2.0"
namespace_separator: "/"
setup:
- type: "docker"
@@ -264,11 +264,11 @@ build_info:
output: "target/executable/samtools/samtools_collate"
executable: "target/executable/samtools/samtools_collate/samtools_collate"
viash_version: "0.9.0"
git_commit: "5526b3e939030daea80595fa98387b469329bbfa"
git_remote: "https://github.com/viash-hub/biobox"
git_commit: "7e530218844c373048bc33de58f021b6460642e5"
git_remote: "https://x-access-token:ghs_kiUBq39QrAlnG6IaeAcTcXhllzqpOV4LDB3e@github.com/viash-hub/biobox"
package_config:
name: "biobox"
version: "0.2.0"
version: "v0.2.0"
description: "A collection of bioinformatics tools for working with sequence data.\n"
info: null
viash_version: "0.9.0"
@@ -278,7 +278,7 @@ package_config:
- ".requirements.commands := ['ps']\n"
- ".engines += { type: \"native\" }"
- ".engines[.type == 'docker'].target_registry := 'images.viash-hub.com'"
- ".engines[.type == 'docker'].target_tag := '0.2.0'"
- ".engines[.type == 'docker'].target_tag := 'v0.2.0'"
keywords:
- "bioinformatics"
- "modules"

View File

@@ -1,6 +1,6 @@
#!/usr/bin/env bash
# samtools_collate 0.2.0
# samtools_collate v0.2.0
#
# This wrapper script is auto-generated by viash 0.9.0 and is thus a derivative
# work thereof. This software comes with ABSOLUTELY NO WARRANTY from Data
@@ -174,7 +174,7 @@ VIASH_META_TEMP_DIR="$VIASH_TEMP"
# ViashHelp: Display helpful explanation about this executable
function ViashHelp {
echo "samtools_collate 0.2.0"
echo "samtools_collate v0.2.0"
echo ""
echo "Shuffles and groups reads in SAM/BAM/CRAM files together by their names."
echo ""
@@ -519,10 +519,10 @@ sed 's#Using ##;s# \([0-9\.]*\)$#: \1#' > /var/software_versions.txt
LABEL org.opencontainers.image.authors="Emma Rousseau"
LABEL org.opencontainers.image.description="Companion container for running component samtools samtools_collate"
LABEL org.opencontainers.image.created="2024-09-12T13:23:15Z"
LABEL org.opencontainers.image.created="2024-09-13T12:35:11Z"
LABEL org.opencontainers.image.source="https://github.com/samtools/samtools"
LABEL org.opencontainers.image.revision="5526b3e939030daea80595fa98387b469329bbfa"
LABEL org.opencontainers.image.version="0.2.0"
LABEL org.opencontainers.image.revision="7e530218844c373048bc33de58f021b6460642e5"
LABEL org.opencontainers.image.version="v0.2.0"
VIASHDOCKER
fi
@@ -658,7 +658,7 @@ while [[ $# -gt 0 ]]; do
shift 1
;;
--version)
echo "samtools_collate 0.2.0"
echo "samtools_collate v0.2.0"
exit
;;
--input)
@@ -914,7 +914,7 @@ if [[ "$VIASH_ENGINE_TYPE" == "docker" ]]; then
# determine docker image id
if [[ "$VIASH_ENGINE_ID" == 'docker' ]]; then
VIASH_DOCKER_IMAGE_ID='images.viash-hub.com/vsh/biobox/samtools/samtools_collate:0.2.0'
VIASH_DOCKER_IMAGE_ID='images.viash-hub.com/vsh/biobox/samtools/samtools_collate:v0.2.0'
fi
# print dockerfile