0075a8df93
Build branch main with version main (8fe9d66)
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Build pipeline: viash-hub.biobox.main-vhhxn
Source commit: 8fe9d66b0c
Source message: Bcftools stats (#142 )
* Initial Commit
* Adding options to config
* Update on script
* update
* Adding test 2 and 3
* Update on config and test
* adding more tests
* debugging and adding tests
* Adding last tests
* removing test_data dir
* Update CHANGELOG.md
* small changes
* small change in help file
* Requested changes
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Co-authored-by: Jakub Majercik <57993790+jakubmajercik@users.noreply.github.com >
2024-09-10 14:10:14 +00:00
beb7940138
Build branch main with version main (320d044)
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Build pipeline: viash-hub.biobox.main-4vvfj
Source commit: 320d044fe4
Source message: Sortmerna (#146 )
2024-09-09 07:10:14 +00:00
3f20a97c9c
Build branch main with version main (9f81386)
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Build pipeline: viash-hub.biobox.main-tr92f
Source commit: 9f81386259
Source message: Fq subsample (#147 )
2024-09-09 06:40:11 +00:00
ac86f27b69
Build branch main with version main (99dec59)
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Build pipeline: viash-hub.biobox.main-vzh9h
Source commit: 99dec5923b
Source message: Bedtools genomecov (#150 and #128 )
* Initial commit
* Update config.vsh.yaml
* Update script.sh
* update on test.sh
* bug fixing
* adding ibam option tests
* depthzero and strand option tests
* 5prime and max tests
* more tests
* Changelog
* Update config.vsh.yaml
* Update config.vsh.yaml
* Update script.sh
* Update test.sh
* TMPDIR
* Unset Variables
* par_trackopts multiple: true
* Minor update to CHANGELOG
---------
Co-authored-by: tgaspe <theodorogtc@gmail.com >
2024-09-06 22:05:55 +00:00
ddad38b4a3
Build branch main with version main (e6627ec)
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Build pipeline: viash-hub.biobox.main-v4lxs
Source commit: e6627ec728
Source message: FastQC (#92 )
* Starting Component
* Creating Files
* update on config file
* Update on test.sh
* Update on config
* Update script.sh
* Update on script.sh
* trying to figure multiple: true
* Update on script.sh
* Update on script
* Adding some tests
* More tests
* Update on script.sh
* Added more tests
* Small Changes
* Update test.sh
* Update on Script and Test
- change the --zip and --html to take wild card '*'
* Added one more test
* Removed test_data dir
* More description
* Update CHANGELOG.md
* Update on config and script
- meta_cpus
- meta_tmp_dir
* Bug Fixed
* unset_if_false
* Updating Tests
* Update script.sh
* debugging
* Minor changes
* Update config.vsh.yaml
* Update config.vsh.yaml
* Required Changes
- large changes on script.sh
* Update config.vsh.yaml
* Adding extra links
* tmpdir bug
* Updating tests
* minor changes
* Adding extra output options
--summary
--data
* minor change
* Update script.sh
* small change in config
2024-09-03 09:13:58 +00:00
f066ef0ffa
Build branch main with version main (da3272d)
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Build pipeline: viash-hub.biobox.main-7x2wm
Source commit: da3272d011
Source message: Bcftools sort (#141 )
* Initial commit
* Update on config file
* Update
* Update config.vsh.yaml
* Update config.vsh.yaml
* Update test.sh
* Update help.txt
* adding meta variables
* Adding test for bcf file
* Update CHANGELOG.md
* Update config.vsh.yaml
* requested changes
---------
Co-authored-by: Jakub Majercik <57993790+jakubmajercik@users.noreply.github.com >
2024-09-02 13:42:09 +00:00