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2f26c0291a08bd4f8bf8379ecf100f9c2cd9b024
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6 Commits

Author SHA1 Message Date
CI
2f26c0291a Build branch main with version main (8f525f5) 
Build pipeline: viash-hub.biobox.main-x27rr

Source commit: 8f525f5e40

Source message: Bedtools_Intersect (#94)

* Initial Commit

* Update config.vsh.yaml

* creating templates

* Update config.vsh.yaml

* Update script.sh

* Added output

* Update config.vsh.yaml

* Update test.sh

* Update test.sh

* More tests

* small changes

* update

- change some var names
- debugged
- added more test

* Update CHANGELOG.md

* Update

* Update help.txt
 2024-07-31 19:42:45 +00:00
CI
02c1c9ebea Build branch main with version main (da414e7) 
Build pipeline: viash-hub.biobox.main-7dwhr

Source commit: da414e72c6

Source message: Add star solo component (#62)

* add star solo component

* change arguments from camelCase to snake_case

* get rid of multiple_sep

* drop star_solo component and just add arguments to star_align_reads

* Update src/star/star_align_reads/script.py

Co-authored-by: Dries Schaumont <5946712+DriesSchaumont@users.noreply.github.com>

---------

Co-authored-by: Dries Schaumont <5946712+DriesSchaumont@users.noreply.github.com>
 2024-07-29 08:14:56 +00:00
CI
ae3fef8eec Build branch main with version main (ec69d9a) 
Build pipeline: viash-hub.biobox.main-t2txs

Source commit: ec69d9af7a

Source message: FEAT: update busco to 5.7.1 (#72)

* FEAT: update busco to 5.7.1

* Typo
 2024-07-01 20:19:17 +00:00
CI
bece67ad47 Build branch main with version main (3e08b59) 
Build pipeline: viash-hub.biobox.main-ch2qp

Source commit: 3e08b5983f

Source message: BUG: pear component failure is ignored (#70)
 2024-07-01 11:04:36 +00:00
CI
9747a7a8d9 Build branch main with version main (3481750) 
Build pipeline: viash-hub.biobox.main-2mtst

Source commit: 3481750f6e

Source message: Output alignments to the transcriptome (#56)

* Output alignments to  the transcriptome

* Change argument name
 2024-06-24 09:29:59 +00:00
CI
9c30676332 Build branch main with version main (d0c648f) 
Build pipeline: vsh-ci-template-p9886

Source commit: d0c648fb7e

Source message: Delete src/bgzip directory (#64)

It was moved to toolbox
 2024-06-24 08:40:34 +00:00