Commit Graph

3 Commits

Author SHA1 Message Date
CI
3f20a97c9c Build branch main with version main (9f81386)
Build pipeline: viash-hub.biobox.main-tr92f

Source commit: 9f81386259

Source message: Fq subsample (#147)
2024-09-09 06:40:11 +00:00
CI
ac86f27b69 Build branch main with version main (99dec59)
Build pipeline: viash-hub.biobox.main-vzh9h

Source commit: 99dec5923b

Source message: Bedtools genomecov (#150 and #128)

* Initial commit

* Update config.vsh.yaml

* Update script.sh

* update on test.sh

* bug fixing

* adding ibam option tests

* depthzero and strand option tests

* 5prime and max tests

* more tests

* Changelog

* Update config.vsh.yaml

* Update config.vsh.yaml

* Update script.sh

* Update test.sh

* TMPDIR

* Unset Variables

* par_trackopts multiple: true

* Minor update to CHANGELOG

---------

Co-authored-by: tgaspe <theodorogtc@gmail.com>
2024-09-06 22:05:55 +00:00
CI
ddad38b4a3 Build branch main with version main (e6627ec)
Build pipeline: viash-hub.biobox.main-v4lxs

Source commit: e6627ec728

Source message: FastQC (#92)

* Starting Component

* Creating Files

* update on config file

* Update on test.sh

* Update on config

* Update script.sh

* Update on script.sh

* trying to figure multiple: true

* Update on script.sh

* Update on script

* Adding some tests

* More tests

* Update on script.sh

* Added more tests

* Small Changes

* Update test.sh

* Update on Script and Test

- change the --zip and --html to take wild card '*'

* Added one more test

* Removed test_data dir

* More description

* Update CHANGELOG.md

* Update on config and script

- meta_cpus
- meta_tmp_dir

* Bug Fixed

* unset_if_false

* Updating Tests

* Update script.sh

* debugging

* Minor changes

* Update config.vsh.yaml

* Update config.vsh.yaml

* Required Changes

- large changes on script.sh

* Update config.vsh.yaml

* Adding extra links

* tmpdir bug

* Updating tests

* minor changes

* Adding extra output options

--summary
--data

* minor change

* Update script.sh

* small change in config
2024-09-03 09:13:58 +00:00