name: biobox
summary: |
  A curated collection of high-quality, standalone bioinformatics components built with [Viash](https://viash.io).
description: |
  `biobox` offers a suite of reliable bioinformatics components, similar to [nf-core/modules](https://github.com/nf-core/modules) and [snakemake-wrappers/bio](https://github.com/snakemake/snakemake-wrappers/tree/master/bio), but built using the [Viash](https://viash.io) framework.

  This approach emphasizes **reusability**, **reproducibility**, and adherence to **best practices**. Key features of `biobox` components include:

  * **Standalone & Nextflow Ready:** Run components directly via the command line or seamlessly integrate them into Nextflow workflows.
  * **High Quality Standards:**
      * Comprehensive documentation for components and parameters.
      * Full exposure of underlying tool arguments.
      * Containerized (Docker) for dependency management and reproducibility.
      * Unit tested for verified functionality.
license: MIT
keywords: [bioinformatics, modules, sequencing]
links:
  issue_tracker: https://github.com/viash-hub/biobox/issues
  repository: https://github.com/viash-hub/biobox

viash_version: 0.9.4

authors:
  - __merge__: /src/_authors/robrecht_cannoodt.yaml
    roles: [ author, maintainer ]
  - __merge__: /src/_authors/angela_o_pisco.yaml
    roles: [ author ]
  - __merge__: /src/_authors/dorien_roosen.yaml
    roles: [ author ]
  - __merge__: /src/_authors/dries_schaumont.yaml
    roles: [ author ]
  - __merge__: /src/_authors/emma_rousseau.yaml
    roles: [ author ]
  - __merge__: /src/_authors/jakub_majercik.yaml
    roles: [ author ]
  - __merge__: /src/_authors/kai_waldrant.yaml
    roles: [ author ]
  - __merge__: /src/_authors/leila_paquay.yaml
    roles: [ author ]
  - __merge__: /src/_authors/sai_nirmayi_yasa.yaml
    roles: [ author ]
  - __merge__: /src/_authors/theodoro_gasperin.yaml
    roles: [ author ]
  - __merge__: /src/_authors/toni_verbeiren.yaml
    roles: [ author ]
  - __merge__: /src/_authors/weiwei_schultz.yaml
    roles: [ author ]

config_mods: |
  .requirements.commands := ['ps']