Files
biobox/_viash.yaml
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Build pipeline: viash-hub.biobox.update-authors-2ctwx

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Source message: add linkedin
2025-06-16 10:00:27 +00:00

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YAML

name: biobox
summary: |
A curated collection of high-quality, standalone bioinformatics components built with [Viash](https://viash.io).
description: |
`biobox` offers a suite of reliable bioinformatics components, similar to [nf-core/modules](https://github.com/nf-core/modules) and [snakemake-wrappers/bio](https://github.com/snakemake/snakemake-wrappers/tree/master/bio), but built using the [Viash](https://viash.io) framework.
This approach emphasizes **reusability**, **reproducibility**, and adherence to **best practices**. Key features of `biobox` components include:
* **Standalone & Nextflow Ready:** Run components directly via the command line or seamlessly integrate them into Nextflow workflows.
* **High Quality Standards:**
* Comprehensive documentation for components and parameters.
* Full exposure of underlying tool arguments.
* Containerized (Docker) for dependency management and reproducibility.
* Unit tested for verified functionality.
license: MIT
keywords: [bioinformatics, modules, sequencing]
links:
issue_tracker: https://github.com/viash-hub/biobox/issues
repository: https://github.com/viash-hub/biobox
viash_version: 0.9.4
authors:
- __merge__: /src/_authors/robrecht_cannoodt.yaml
roles: [ author, maintainer ]
- __merge__: /src/_authors/angela_o_pisco.yaml
roles: [ author ]
- __merge__: /src/_authors/dorien_roosen.yaml
roles: [ author ]
- __merge__: /src/_authors/dries_schaumont.yaml
roles: [ author ]
- __merge__: /src/_authors/emma_rousseau.yaml
roles: [ author ]
- __merge__: /src/_authors/jakub_majercik.yaml
roles: [ author ]
- __merge__: /src/_authors/kai_waldrant.yaml
roles: [ author ]
- __merge__: /src/_authors/leila_paquay.yaml
roles: [ author ]
- __merge__: /src/_authors/sai_nirmayi_yasa.yaml
roles: [ author ]
- __merge__: /src/_authors/theodoro_gasperin.yaml
roles: [ author ]
- __merge__: /src/_authors/toni_verbeiren.yaml
roles: [ author ]
- __merge__: /src/_authors/weiwei_schultz.yaml
roles: [ author ]
config_mods: |
.requirements.commands := ['ps']