CI
04a5851ff8
Build pipeline: viash-hub.biobox.main-tb4cv
Source commit: 7158daa5f6
Source message: Fix bases2fastq component, update to latest practices (#190)
* wip updates
* refactor component
* assume bases2fastq follows semver
* fix version command
* add entry to changelog
* move to minor changes
17 lines
272 B
Bash
17 lines
272 B
Bash
#!/bin/bash
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## VIASH START
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## VIASH END
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set -eo pipefail
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# unset flags
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[[ "$par_strand" == "false" ]] && unset par_strand
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# Execute bedtools cluster
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bedtools cluster \
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-i "$par_input" \
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${par_distance:+-d "$par_distance"} \
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${par_strand:+-s} \
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> "$par_output"
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