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biobox/src/fastp/test_data/script.sh
CI 90a16ac646 Build branch add-agat-convert-spgff2tsv with version add-agat-convert-spgff2tsv (fa5ed70)
Build pipeline: viash-hub.biobox.add-agat-convert-spgff2tsv-t5ds2

Source commit: fa5ed706e5

Source message: add tests
2024-07-31 07:42:13 +00:00

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# fastp test data
# Test data was obtained from https://github.com/snakemake/snakemake-wrappers/tree/master/bio/fastp/test
if [ ! -d /tmp/snakemake-wrappers ]; then
git clone --depth 1 --single-branch --branch master https://github.com/snakemake/snakemake-wrappers /tmp/snakemake-wrappers
fi
cp -r /tmp/snakemake-wrappers/bio/fastp/test/reads/* src/fastp/test_data