CI
bb63aa6a3e
Build pipeline: viash-hub.biobox.bump-viash-version-pjn8d
Source commit: 448a66d52e
Source message: fix agat requirements
11 lines
396 B
Bash
Executable File
11 lines
396 B
Bash
Executable File
#!/bin/bash
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# clone repo
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if [ ! -d /tmp/agat_source ]; then
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git clone --depth 1 --single-branch --branch master https://github.com/NBISweden/AGAT /tmp/agat_source
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fi
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# copy test data
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cp -r /tmp/agat_source/t/scripts_output/out/agat_convert_sp_gff2tsv_1.tsv src/agat/agat_convert_sp_gff2tsv/test_data
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cp -r /tmp/agat_source/t/scripts_output/in/1.gff src/agat/agat_convert_sp_gff2tsv/test_data
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