CI dffc02813f Build branch main with version main (1d17ce0) ...

Build pipeline: viash-hub.biobox.main-79vlw

Source commit: 1d17ce01e2

Source message: Add cellranger_mkref (#164)

* initial commit dedup

* Revert "initial commit dedup"

This reverts commit 38f586bec0ac9e4312b016e29c3aa0bd53f292b2.

* mkref component - config, test data, scripts, changelog

* Small updates

* Update CHANGELOG

* Update src/cellranger/cellranger_mkref/script.sh

---------

Co-authored-by: DriesSchaumont <5946712+DriesSchaumont@users.noreply.github.com>
Co-authored-by: Robrecht Cannoodt <rcannood@gmail.com>

2024-11-08 10:06:06 +00:00

..

agat

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

arriba

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

bbmap/bbmap_bbsplit

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

bcftools

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

bcl_convert

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

bd_rhapsody

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

bedtools

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

busco

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

cellranger/cellranger_mkref

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

cutadapt

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

falco

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

fastp

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

fastqc

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

featurecounts

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

fq_subsample

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

gffread

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

kallisto

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

lofreq

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

multiqc

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

nanoplot

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

pear

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

qualimap/qualimap_rnaseq

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

rsem

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

rseqc

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

salmon

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

samtools

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

seqtk

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

snpeff

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

sortmerna

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

star

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

trimgalore

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00

umi_tools

Build branch main with version main (1d17ce0)

2024-11-08 10:06:06 +00:00