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biobox/_viash.yaml
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Source message: Update readme (#177)

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2025-05-06 20:36:16 +00:00

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YAML

name: biobox
summary: |
A curated collection of high-quality, standalone bioinformatics components built with [Viash](https://viash.io).
description: |
`biobox` offers a suite of reliable bioinformatics components, similar to [nf-core/modules](https://github.com/nf-core/modules) and [snakemake-wrappers/bio](https://github.com/snakemake/snakemake-wrappers/tree/master/bio), but built using the [Viash](https://viash.io) framework.
This approach emphasizes **reusability**, **reproducibility**, and adherence to **best practices**. Key features of `biobox` components include:
* **Standalone & Nextflow Ready:** Run components directly via the command line or seamlessly integrate them into Nextflow workflows.
* **High Quality Standards:**
* Comprehensive documentation for components and parameters.
* Full exposure of underlying tool arguments.
* Containerized (Docker) for dependency management and reproducibility.
* Unit tested for verified functionality.
license: MIT
keywords: [bioinformatics, modules, sequencing]
links:
issue_tracker: https://github.com/viash-hub/biobox/issues
repository: https://github.com/viash-hub/biobox
viash_version: 0.9.4
config_mods: |
.requirements.commands := ['ps']