From 9d767f2ae317aec371dbb21d9c81f153bce689df Mon Sep 17 00:00:00 2001 From: CI Date: Thu, 12 Sep 2024 15:47:57 +0000 Subject: [PATCH] Build branch v0.1 with version v0.1 (5705b88) Build pipeline: viash-hub.craftbox.v0.1-fqjd5 Source commit: https://github.com/viash-hub/craftbox/commit/5705b88fa20f267475b5d0ae1ca25dbf55ff1295 Source message: Bump Viash and update CHANGELOG --- CHANGELOG => CHANGELOG.md | 4 +++- target/executable/concat_text/.config.vsh.yaml | 2 +- target/executable/concat_text/concat_text | 4 ++-- target/executable/csv2fasta/.config.vsh.yaml | 2 +- target/executable/csv2fasta/csv2fasta | 4 ++-- target/executable/untar/.config.vsh.yaml | 2 +- target/executable/untar/untar | 4 ++-- target/nextflow/concat_text/.config.vsh.yaml | 2 +- target/nextflow/concat_text/main.nf | 2 +- target/nextflow/csv2fasta/.config.vsh.yaml | 2 +- target/nextflow/csv2fasta/main.nf | 2 +- target/nextflow/untar/.config.vsh.yaml | 2 +- target/nextflow/untar/main.nf | 2 +- 13 files changed, 18 insertions(+), 16 deletions(-) rename CHANGELOG => CHANGELOG.md (81%) diff --git a/CHANGELOG b/CHANGELOG.md similarity index 81% rename from CHANGELOG rename to CHANGELOG.md index 5835659..5e271d2 100644 --- a/CHANGELOG +++ b/CHANGELOG.md @@ -2,6 +2,8 @@ ## NEW FEATURES +* `concat_text`: Concatenate a number of text files + * `csv2fasta`: Convert two columns from a CSV file to FASTA entries (PR #1). * `untar`: Unpack a .tar file. When the contents of the .tar file is just a single directory, @@ -9,4 +11,4 @@ ## MINOR CHANGES -* Bump viash to 0.9.0-RC7 (PR #6). \ No newline at end of file +* Bump viash to 0.9.0 diff --git a/target/executable/concat_text/.config.vsh.yaml b/target/executable/concat_text/.config.vsh.yaml index db45dfe..302ae72 100644 --- a/target/executable/concat_text/.config.vsh.yaml +++ b/target/executable/concat_text/.config.vsh.yaml @@ -171,7 +171,7 @@ build_info: output: "target/executable/concat_text" executable: "target/executable/concat_text/concat_text" viash_version: "0.9.0-RC7" - git_commit: "373be82129c13f50558c0dae25c07afe0866a8ba" + git_commit: "5705b88fa20f267475b5d0ae1ca25dbf55ff1295" git_remote: "https://github.com/viash-hub/craftbox" package_config: name: "craftbox" diff --git a/target/executable/concat_text/concat_text b/target/executable/concat_text/concat_text index fd694cc..80608f6 100755 --- a/target/executable/concat_text/concat_text +++ b/target/executable/concat_text/concat_text @@ -479,9 +479,9 @@ RUN apk add --no-cache bash procps file LABEL org.opencontainers.image.authors="Toni Verbeiren, Dries Schaumont" LABEL org.opencontainers.image.description="Companion container for running component concat_text" -LABEL org.opencontainers.image.created="2024-09-12T12:24:11Z" +LABEL org.opencontainers.image.created="2024-09-12T15:43:28Z" LABEL org.opencontainers.image.source="https://github.com/viash-hub/craftbox" -LABEL org.opencontainers.image.revision="373be82129c13f50558c0dae25c07afe0866a8ba" +LABEL org.opencontainers.image.revision="5705b88fa20f267475b5d0ae1ca25dbf55ff1295" LABEL org.opencontainers.image.version="v0.1" VIASHDOCKER diff --git a/target/executable/csv2fasta/.config.vsh.yaml b/target/executable/csv2fasta/.config.vsh.yaml index 0930663..e917abc 100644 --- a/target/executable/csv2fasta/.config.vsh.yaml +++ b/target/executable/csv2fasta/.config.vsh.yaml @@ -222,7 +222,7 @@ build_info: output: "target/executable/csv2fasta" executable: "target/executable/csv2fasta/csv2fasta" viash_version: "0.9.0-RC7" - git_commit: "373be82129c13f50558c0dae25c07afe0866a8ba" + git_commit: "5705b88fa20f267475b5d0ae1ca25dbf55ff1295" git_remote: "https://github.com/viash-hub/craftbox" package_config: name: "craftbox" diff --git a/target/executable/csv2fasta/csv2fasta b/target/executable/csv2fasta/csv2fasta index 877e2bb..eb680c4 100755 --- a/target/executable/csv2fasta/csv2fasta +++ b/target/executable/csv2fasta/csv2fasta @@ -525,9 +525,9 @@ RUN pip install --upgrade pip && \ pip install --upgrade --no-cache-dir "dnaio" LABEL org.opencontainers.image.description="Companion container for running component csv2fasta" -LABEL org.opencontainers.image.created="2024-09-12T12:24:10Z" +LABEL org.opencontainers.image.created="2024-09-12T15:43:27Z" LABEL org.opencontainers.image.source="https://github.com/viash-hub/craftbox" -LABEL org.opencontainers.image.revision="373be82129c13f50558c0dae25c07afe0866a8ba" +LABEL org.opencontainers.image.revision="5705b88fa20f267475b5d0ae1ca25dbf55ff1295" LABEL org.opencontainers.image.version="v0.1" VIASHDOCKER diff --git a/target/executable/untar/.config.vsh.yaml b/target/executable/untar/.config.vsh.yaml index 20cffe4..c343749 100644 --- a/target/executable/untar/.config.vsh.yaml +++ b/target/executable/untar/.config.vsh.yaml @@ -147,7 +147,7 @@ build_info: output: "target/executable/untar" executable: "target/executable/untar/untar" viash_version: "0.9.0-RC7" - git_commit: "373be82129c13f50558c0dae25c07afe0866a8ba" + git_commit: "5705b88fa20f267475b5d0ae1ca25dbf55ff1295" git_remote: "https://github.com/viash-hub/craftbox" package_config: name: "craftbox" diff --git a/target/executable/untar/untar b/target/executable/untar/untar index eb78308..ed86cbd 100755 --- a/target/executable/untar/untar +++ b/target/executable/untar/untar @@ -476,9 +476,9 @@ RUN apt-get update && \ rm -rf /var/lib/apt/lists/* LABEL org.opencontainers.image.description="Companion container for running component untar" -LABEL org.opencontainers.image.created="2024-09-12T12:24:11Z" +LABEL org.opencontainers.image.created="2024-09-12T15:43:28Z" LABEL org.opencontainers.image.source="https://github.com/viash-hub/craftbox" -LABEL org.opencontainers.image.revision="373be82129c13f50558c0dae25c07afe0866a8ba" +LABEL org.opencontainers.image.revision="5705b88fa20f267475b5d0ae1ca25dbf55ff1295" LABEL org.opencontainers.image.version="v0.1" VIASHDOCKER diff --git a/target/nextflow/concat_text/.config.vsh.yaml b/target/nextflow/concat_text/.config.vsh.yaml index abc1c86..2e917c9 100644 --- a/target/nextflow/concat_text/.config.vsh.yaml +++ b/target/nextflow/concat_text/.config.vsh.yaml @@ -171,7 +171,7 @@ build_info: output: "target/nextflow/concat_text" executable: "target/nextflow/concat_text/main.nf" viash_version: "0.9.0-RC7" - git_commit: "373be82129c13f50558c0dae25c07afe0866a8ba" + git_commit: "5705b88fa20f267475b5d0ae1ca25dbf55ff1295" git_remote: "https://github.com/viash-hub/craftbox" package_config: name: "craftbox" diff --git a/target/nextflow/concat_text/main.nf b/target/nextflow/concat_text/main.nf index 1a068f3..1490f1e 100644 --- a/target/nextflow/concat_text/main.nf +++ b/target/nextflow/concat_text/main.nf @@ -3025,7 +3025,7 @@ meta = [ "engine" : "docker|native", "output" : "target/nextflow/concat_text", "viash_version" : "0.9.0-RC7", - "git_commit" : "373be82129c13f50558c0dae25c07afe0866a8ba", + "git_commit" : "5705b88fa20f267475b5d0ae1ca25dbf55ff1295", "git_remote" : "https://github.com/viash-hub/craftbox" }, "package_config" : { diff --git a/target/nextflow/csv2fasta/.config.vsh.yaml b/target/nextflow/csv2fasta/.config.vsh.yaml index 8e95cd2..6b10312 100644 --- a/target/nextflow/csv2fasta/.config.vsh.yaml +++ b/target/nextflow/csv2fasta/.config.vsh.yaml @@ -222,7 +222,7 @@ build_info: output: "target/nextflow/csv2fasta" executable: "target/nextflow/csv2fasta/main.nf" viash_version: "0.9.0-RC7" - git_commit: "373be82129c13f50558c0dae25c07afe0866a8ba" + git_commit: "5705b88fa20f267475b5d0ae1ca25dbf55ff1295" git_remote: "https://github.com/viash-hub/craftbox" package_config: name: "craftbox" diff --git a/target/nextflow/csv2fasta/main.nf b/target/nextflow/csv2fasta/main.nf index d2f6dd6..e855ba6 100644 --- a/target/nextflow/csv2fasta/main.nf +++ b/target/nextflow/csv2fasta/main.nf @@ -3061,7 +3061,7 @@ meta = [ "engine" : "docker|native", "output" : "target/nextflow/csv2fasta", "viash_version" : "0.9.0-RC7", - "git_commit" : "373be82129c13f50558c0dae25c07afe0866a8ba", + "git_commit" : "5705b88fa20f267475b5d0ae1ca25dbf55ff1295", "git_remote" : "https://github.com/viash-hub/craftbox" }, "package_config" : { diff --git a/target/nextflow/untar/.config.vsh.yaml b/target/nextflow/untar/.config.vsh.yaml index 3521e07..d213d7e 100644 --- a/target/nextflow/untar/.config.vsh.yaml +++ b/target/nextflow/untar/.config.vsh.yaml @@ -147,7 +147,7 @@ build_info: output: "target/nextflow/untar" executable: "target/nextflow/untar/main.nf" viash_version: "0.9.0-RC7" - git_commit: "373be82129c13f50558c0dae25c07afe0866a8ba" + git_commit: "5705b88fa20f267475b5d0ae1ca25dbf55ff1295" git_remote: "https://github.com/viash-hub/craftbox" package_config: name: "craftbox" diff --git a/target/nextflow/untar/main.nf b/target/nextflow/untar/main.nf index 733f5d2..176485b 100644 --- a/target/nextflow/untar/main.nf +++ b/target/nextflow/untar/main.nf @@ -2982,7 +2982,7 @@ meta = [ "engine" : "docker|native", "output" : "target/nextflow/untar", "viash_version" : "0.9.0-RC7", - "git_commit" : "373be82129c13f50558c0dae25c07afe0866a8ba", + "git_commit" : "5705b88fa20f267475b5d0ae1ca25dbf55ff1295", "git_remote" : "https://github.com/viash-hub/craftbox" }, "package_config" : {