name: "check_disk_space" version: "v0.3.2" argument_groups: - name: "Inputs" arguments: - type: "integer" name: "--tmp_space_required" description: "Temporary space required in MB." info: null default: - 1000 required: false direction: "input" multiple: false multiple_sep: ";" - type: "integer" name: "--publish_space_required" description: "Publish space required in MB." info: null default: - 500 required: false direction: "input" multiple: false multiple_sep: ";" - type: "file" name: "--publish_dir" description: "Directory where workflow outputs will be published." info: null must_exist: true create_parent: true required: false direction: "input" multiple: false multiple_sep: ";" - name: "Outputs" arguments: - type: "file" name: "--output" description: "Output file containing system resources details." info: null default: - "output.txt" must_exist: true create_parent: true required: false direction: "output" multiple: false multiple_sep: ";" resources: - type: "bash_script" path: "script.sh" is_executable: true description: "Check for available disk space on the system.\n\nThis component is only\ \ useful when working with persistent storage environments\nwhere all workflow steps\ \ execute on the same instance or share the same\nstorage volume. That is, running\ \ thus component on e.g. AWS Batch or\nother cloud-based systems will not work as\ \ expected, since each step\ncan run on a different instance and resources will\ \ not be shared.\n\nFor distributed environments, consider integrating resource\ \ checks directly\ninto the components that will actually consume the storage, rather\ \ than\nusing this standalone check.\n" test_resources: - type: "bash_script" path: "test.sh" is_executable: true info: null status: "enabled" scope: image: "public" target: "public" requirements: commands: - "ps" license: "MIT" links: repository: "https://github.com/viash-hub/craftbox" runners: - type: "executable" id: "executable" docker_setup_strategy: "ifneedbepullelsecachedbuild" - type: "nextflow" id: "nextflow" directives: tag: "$id" auto: simplifyInput: true simplifyOutput: false transcript: false publish: false config: labels: mem1gb: "memory = 1000000000.B" mem2gb: "memory = 2000000000.B" mem5gb: "memory = 5000000000.B" mem10gb: "memory = 10000000000.B" mem20gb: "memory = 20000000000.B" mem50gb: "memory = 50000000000.B" mem100gb: "memory = 100000000000.B" mem200gb: "memory = 200000000000.B" mem500gb: "memory = 500000000000.B" mem1tb: "memory = 1000000000000.B" mem2tb: "memory = 2000000000000.B" mem5tb: "memory = 5000000000000.B" mem10tb: "memory = 10000000000000.B" mem20tb: "memory = 20000000000000.B" mem50tb: "memory = 50000000000000.B" mem100tb: "memory = 100000000000000.B" mem200tb: "memory = 200000000000000.B" mem500tb: "memory = 500000000000000.B" mem1gib: "memory = 1073741824.B" mem2gib: "memory = 2147483648.B" mem4gib: "memory = 4294967296.B" mem8gib: "memory = 8589934592.B" mem16gib: "memory = 17179869184.B" mem32gib: "memory = 34359738368.B" mem64gib: "memory = 68719476736.B" mem128gib: "memory = 137438953472.B" mem256gib: "memory = 274877906944.B" mem512gib: "memory = 549755813888.B" mem1tib: "memory = 1099511627776.B" mem2tib: "memory = 2199023255552.B" mem4tib: "memory = 4398046511104.B" mem8tib: "memory = 8796093022208.B" mem16tib: "memory = 17592186044416.B" mem32tib: "memory = 35184372088832.B" mem64tib: "memory = 70368744177664.B" mem128tib: "memory = 140737488355328.B" mem256tib: "memory = 281474976710656.B" mem512tib: "memory = 562949953421312.B" cpu1: "cpus = 1" cpu2: "cpus = 2" cpu5: "cpus = 5" cpu10: "cpus = 10" cpu20: "cpus = 20" cpu50: "cpus = 50" cpu100: "cpus = 100" cpu200: "cpus = 200" cpu500: "cpus = 500" cpu1000: "cpus = 1000" debug: false container: "docker" engines: - type: "docker" id: "docker" image: "bash:latest" target_registry: "images.viash-hub.com" target_tag: "v0.3.2" namespace_separator: "/" entrypoint: [] cmd: null - type: "native" id: "native" build_info: config: "src/check_disk_space/config.vsh.yaml" runner: "nextflow" engine: "docker|native" output: "target/nextflow/check_disk_space" executable: "target/nextflow/check_disk_space/main.nf" viash_version: "0.9.7" git_commit: "7d520dc76cb6b3f1eaece9afcc9a3458ca82afe9" git_remote: "https://github.com/viash-hub/craftbox" package_config: name: "craftbox" version: "v0.3.2" summary: "A collection of custom-tailored scripts and applied utilities built with\ \ Viash.\n" description: "`craftbox` is a curated collection of custom scripts and utilities\ \ designed to tackle context-specific tasks.\n\nEmphasizing the Viash principles,\ \ `craftbox` components aim for **reusability**, **reproducibility**, and adherence\ \ to **best practices**. Key features generally include:\n\n* **Standalone & Nextflow\ \ Ready:** Components are built to run directly via the command line or be smoothly\ \ integrated into Nextflow workflows.\n* **Custom Implementations:** Contains\ \ scripts and tools developed for particular tasks that may not be found in broader\ \ collections.\n* **High Quality Standards (promoted by Viash):**\n * Clear\ \ documentation for components and their parameters.\n * Full exposure of underlying\ \ script/tool arguments for fine-grained control.\n * Containerized (Docker)\ \ to ensure dependency management and a consistent, reproducible runtime environment.\n\ \ * Unit tested where applicable to ensure components function as expected.\n" info: null viash_version: "0.9.7" source: "src" target: "target" config_mods: - ".requirements.commands := ['ps']\n" - ".engines += { type: \"native\" }" - ".engines[.type == 'docker'].target_registry := 'images.viash-hub.com'" - ".engines[.type == 'docker'].target_tag := 'v0.3.2'" keywords: - "scripts" - "custom" - "implementations" - "utilities" license: "MIT" organization: "vsh" links: repository: "https://github.com/viash-hub/craftbox" issue_tracker: "https://github.com/viash-hub/craftbox/issues"