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Build branch v0.3 with version v0.3.10 (e6fbd0c)

Browse Source 
Build pipeline: vsh-ci-build-template-xmldm

Source commit: e6fbd0c220

Source message: Release version v0.3.10
This commit is contained in:
CI
2025-05-07 11:35:04 +00:00
parent b5f42c8055
commit b90bd3453a
36 changed files with 518 additions and 202 deletions
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14
target/executable/io/interop_summary_to_csv/.config.vsh.yaml
View File

@@ -1,6 +1,6 @@
name: "interop_summary_to_csv"
namespace: "io"
version: "v0.3.9"
version: "v0.3.10"
argument_groups:
- name: "Input arguments"
arguments:
@@ -126,7 +126,7 @@ engines:
id: "docker"
image: "debian:stable-slim"
target_registry: "images.viash-hub.com"
target_tag: "v0.3.9"
target_tag: "v0.3.10"
namespace_separator: "/"
setup:
- type: "apt"
@@ -151,16 +151,16 @@ build_info:
output: "target/executable/io/interop_summary_to_csv"
executable: "target/executable/io/interop_summary_to_csv/interop_summary_to_csv"
viash_version: "0.9.4"
git_commit: "820318c378d8119e2aa98768282e43c2aa017ba7"
git_commit: "e6fbd0c2203f8ddda7f737ea22a113bd7be10fa6"
git_remote: "https://github.com/viash-hub/demultiplex"
git_tag: "v0.3.8-5-g820318c"
git_tag: "v0.3.10"
package_config:
name: "demultiplex"
version: "v0.3.9"
version: "v0.3.10"
description: "Demultiplexing pipeline\n"
info:
test_resources:
- path: "gs://viash-hub-test-data/demultiplex/v2/"
- path: "gs://viash-hub-resources/demultiplex/v3"
dest: "testData"
viash_version: "0.9.4"
source: "src"
@@ -172,7 +172,7 @@ package_config:
)'\n"
- ".engines += { type: \"native\" }"
- ".engines[.type == 'docker'].target_registry := 'images.viash-hub.com'"
- ".engines[.type == 'docker'].target_tag := 'v0.3.9'"
- ".engines[.type == 'docker'].target_tag := 'v0.3.10'"
keywords:
- "bioinformatics"
- "sequence"

14
target/executable/io/interop_summary_to_csv/interop_summary_to_csv
View File

@@ -1,6 +1,6 @@
#!/usr/bin/env bash
# interop_summary_to_csv v0.3.9
# interop_summary_to_csv v0.3.10
#
# This wrapper script is auto-generated by viash 0.9.4 and is thus a derivative
# work thereof. This software comes with ABSOLUTELY NO WARRANTY from Data
@@ -454,10 +454,10 @@ tar -C /tmp/ --no-same-owner --no-same-permissions -xvf /tmp/interop.tar.gz && \
mv /tmp/interop-1.3.1-Linux-GNU/bin/index-summary /tmp/interop-1.3.1-Linux-GNU/bin/summary /usr/local/bin/
LABEL org.opencontainers.image.description="Companion container for running component io interop_summary_to_csv"
LABEL org.opencontainers.image.created="2025-04-25T12:13:39Z"
LABEL org.opencontainers.image.created="2025-05-07T11:20:11Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/demultiplex"
LABEL org.opencontainers.image.revision="820318c378d8119e2aa98768282e43c2aa017ba7"
LABEL org.opencontainers.image.version="v0.3.9"
LABEL org.opencontainers.image.revision="e6fbd0c2203f8ddda7f737ea22a113bd7be10fa6"
LABEL org.opencontainers.image.version="v0.3.10"
VIASHDOCKER
fi
@@ -574,7 +574,7 @@ VIASH_DOCKER_RUN_ARGS=(-i --rm)
# ViashHelp: Display helpful explanation about this executable
function ViashHelp {
echo "interop_summary_to_csv v0.3.9"
echo "interop_summary_to_csv v0.3.10"
echo ""
echo "Input arguments:"
echo " --input"
@@ -635,7 +635,7 @@ while [[ $# -gt 0 ]]; do
shift 1
;;
--version)
echo "interop_summary_to_csv v0.3.9"
echo "interop_summary_to_csv v0.3.10"
exit
;;
--input)
@@ -759,7 +759,7 @@ if [[ "$VIASH_ENGINE_TYPE" == "docker" ]]; then
# determine docker image id
if [[ "$VIASH_ENGINE_ID" == 'docker' ]]; then
VIASH_DOCKER_IMAGE_ID='images.viash-hub.com/vsh/demultiplex/io/interop_summary_to_csv:v0.3.9'
VIASH_DOCKER_IMAGE_ID='images.viash-hub.com/vsh/demultiplex/io/interop_summary_to_csv:v0.3.10'
fi
# print dockerfile

14
target/executable/io/publish/.config.vsh.yaml
View File

@@ -1,6 +1,6 @@
name: "publish"
namespace: "io"
version: "v0.3.9"
version: "v0.3.10"
argument_groups:
- name: "Input arguments"
arguments:
@@ -181,7 +181,7 @@ engines:
id: "docker"
image: "debian:stable-slim"
target_registry: "images.viash-hub.com"
target_tag: "v0.3.9"
target_tag: "v0.3.10"
namespace_separator: "/"
setup:
- type: "apt"
@@ -199,16 +199,16 @@ build_info:
output: "target/executable/io/publish"
executable: "target/executable/io/publish/publish"
viash_version: "0.9.4"
git_commit: "820318c378d8119e2aa98768282e43c2aa017ba7"
git_commit: "e6fbd0c2203f8ddda7f737ea22a113bd7be10fa6"
git_remote: "https://github.com/viash-hub/demultiplex"
git_tag: "v0.3.8-5-g820318c"
git_tag: "v0.3.10"
package_config:
name: "demultiplex"
version: "v0.3.9"
version: "v0.3.10"
description: "Demultiplexing pipeline\n"
info:
test_resources:
- path: "gs://viash-hub-test-data/demultiplex/v2/"
- path: "gs://viash-hub-resources/demultiplex/v3"
dest: "testData"
viash_version: "0.9.4"
source: "src"
@@ -220,7 +220,7 @@ package_config:
)'\n"
- ".engines += { type: \"native\" }"
- ".engines[.type == 'docker'].target_registry := 'images.viash-hub.com'"
- ".engines[.type == 'docker'].target_tag := 'v0.3.9'"
- ".engines[.type == 'docker'].target_tag := 'v0.3.10'"
keywords:
- "bioinformatics"
- "sequence"

14
target/executable/io/publish/publish
View File

@@ -1,6 +1,6 @@
#!/usr/bin/env bash
# publish v0.3.9
# publish v0.3.10
#
# This wrapper script is auto-generated by viash 0.9.4 and is thus a derivative
# work thereof. This software comes with ABSOLUTELY NO WARRANTY from Data
@@ -450,10 +450,10 @@ RUN apt-get update && \
rm -rf /var/lib/apt/lists/*
LABEL org.opencontainers.image.description="Companion container for running component io publish"
LABEL org.opencontainers.image.created="2025-04-25T12:13:38Z"
LABEL org.opencontainers.image.created="2025-05-07T11:20:10Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/demultiplex"
LABEL org.opencontainers.image.revision="820318c378d8119e2aa98768282e43c2aa017ba7"
LABEL org.opencontainers.image.version="v0.3.9"
LABEL org.opencontainers.image.revision="e6fbd0c2203f8ddda7f737ea22a113bd7be10fa6"
LABEL org.opencontainers.image.version="v0.3.10"
VIASHDOCKER
fi
@@ -570,7 +570,7 @@ VIASH_DOCKER_RUN_ARGS=(-i --rm)
# ViashHelp: Display helpful explanation about this executable
function ViashHelp {
echo "publish v0.3.9"
echo "publish v0.3.10"
echo ""
echo "Publish the processed results of the run"
echo ""
@@ -655,7 +655,7 @@ while [[ $# -gt 0 ]]; do
shift 1
;;
--version)
echo "publish v0.3.9"
echo "publish v0.3.10"
exit
;;
--input)
@@ -840,7 +840,7 @@ if [[ "$VIASH_ENGINE_TYPE" == "docker" ]]; then
# determine docker image id
if [[ "$VIASH_ENGINE_ID" == 'docker' ]]; then
VIASH_DOCKER_IMAGE_ID='images.viash-hub.com/vsh/demultiplex/io/publish:v0.3.9'
VIASH_DOCKER_IMAGE_ID='images.viash-hub.com/vsh/demultiplex/io/publish:v0.3.10'
fi
# print dockerfile

14
target/executable/io/untar/.config.vsh.yaml
View File

@@ -1,6 +1,6 @@
name: "untar"
namespace: "io"
version: "v0.3.9"
version: "v0.3.10"
argument_groups:
- name: "Input arguments"
arguments:
@@ -138,7 +138,7 @@ engines:
id: "docker"
image: "debian:stable-slim"
target_registry: "images.viash-hub.com"
target_tag: "v0.3.9"
target_tag: "v0.3.10"
namespace_separator: "/"
setup:
- type: "apt"
@@ -156,16 +156,16 @@ build_info:
output: "target/executable/io/untar"
executable: "target/executable/io/untar/untar"
viash_version: "0.9.4"
git_commit: "820318c378d8119e2aa98768282e43c2aa017ba7"
git_commit: "e6fbd0c2203f8ddda7f737ea22a113bd7be10fa6"
git_remote: "https://github.com/viash-hub/demultiplex"
git_tag: "v0.3.8-5-g820318c"
git_tag: "v0.3.10"
package_config:
name: "demultiplex"
version: "v0.3.9"
version: "v0.3.10"
description: "Demultiplexing pipeline\n"
info:
test_resources:
- path: "gs://viash-hub-test-data/demultiplex/v2/"
- path: "gs://viash-hub-resources/demultiplex/v3"
dest: "testData"
viash_version: "0.9.4"
source: "src"
@@ -177,7 +177,7 @@ package_config:
)'\n"
- ".engines += { type: \"native\" }"
- ".engines[.type == 'docker'].target_registry := 'images.viash-hub.com'"
- ".engines[.type == 'docker'].target_tag := 'v0.3.9'"
- ".engines[.type == 'docker'].target_tag := 'v0.3.10'"
keywords:
- "bioinformatics"
- "sequence"

14
target/executable/io/untar/untar
View File

@@ -1,6 +1,6 @@
#!/usr/bin/env bash
# untar v0.3.9
# untar v0.3.10
#
# This wrapper script is auto-generated by viash 0.9.4 and is thus a derivative
# work thereof. This software comes with ABSOLUTELY NO WARRANTY from Data
@@ -450,10 +450,10 @@ RUN apt-get update && \
rm -rf /var/lib/apt/lists/*
LABEL org.opencontainers.image.description="Companion container for running component io untar"
LABEL org.opencontainers.image.created="2025-04-25T12:13:38Z"
LABEL org.opencontainers.image.created="2025-05-07T11:20:10Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/demultiplex"
LABEL org.opencontainers.image.revision="820318c378d8119e2aa98768282e43c2aa017ba7"
LABEL org.opencontainers.image.version="v0.3.9"
LABEL org.opencontainers.image.revision="e6fbd0c2203f8ddda7f737ea22a113bd7be10fa6"
LABEL org.opencontainers.image.version="v0.3.10"
VIASHDOCKER
fi
@@ -570,7 +570,7 @@ VIASH_DOCKER_RUN_ARGS=(-i --rm)
# ViashHelp: Display helpful explanation about this executable
function ViashHelp {
echo "untar v0.3.9"
echo "untar v0.3.10"
echo ""
echo "Unpack a .tar file. When the contents of the .tar file is just a single"
echo "directory,"
@@ -641,7 +641,7 @@ while [[ $# -gt 0 ]]; do
shift 1
;;
--version)
echo "untar v0.3.9"
echo "untar v0.3.10"
exit
;;
--input)
@@ -771,7 +771,7 @@ if [[ "$VIASH_ENGINE_TYPE" == "docker" ]]; then
# determine docker image id
if [[ "$VIASH_ENGINE_ID" == 'docker' ]]; then
VIASH_DOCKER_IMAGE_ID='images.viash-hub.com/vsh/demultiplex/io/untar:v0.3.9'
VIASH_DOCKER_IMAGE_ID='images.viash-hub.com/vsh/demultiplex/io/untar:v0.3.10'
fi
# print dockerfile