diff --git a/README.qmd b/README.qmd
index eb6b5a6..44e5606 100644
--- a/README.qmd
+++ b/README.qmd
@@ -53,7 +53,7 @@ Two variants of the same workflow are provided, depending on the flexibility in
 
 ### Test data
 
-We have provided test data at `gs://viash-hub-test-data/demultiplex/v3/demultiplex_htrnaseq_meta/SingleCell-RNA_P3_2` (Illumina), but please feel free to bring your own. The URL of the test data can be provided as-is to the workflow, or you can download everything and specify a local path.
+We have provided test data at `gs://viash-hub-resources/demultiplex/v3/demultiplex_htrnaseq_meta/SingleCell-RNA_P3_2` (Illumina), but please feel free to bring your own. The URL of the test data can be provided as-is to the workflow, or you can download everything and specify a local path.
 
 The input data should follow the structure of either Illumina or Element Biosciences sequencers. The workflow will automatically detect which demultiplexer to use (`bclconvert` or `bases2fastq`) based on the 
 presence of either `SampleSheet.csv` or `RunParameters.xml` in the input directory. Demultiplexer can also be set explicitly using the `--demultiplexer` parameter.
@@ -79,7 +79,7 @@ Press the ‘Launch’ button and follow the instructions.
 3. In the next step, we provide the paramters as follows and leave the rest as defalut:
 
 - `input`:
-  `gs://viash-hub-test-data/demultiplex/v3/demultiplex_htrnaseq_meta/SingleCell-RNA_P3_2`
+  `gs://viash-hub-resources/demultiplex/v3/demultiplex_htrnaseq_meta/SingleCell-RNA_P3_2`
 
 ![](assets/demultiplex-launch-parameters-2.png)
 
@@ -138,8 +138,8 @@ easiest is to use the integrated help functionality, for instance
 using the following:
 
 ``` bash
- nextflow run https://packages.viash-hub.com/vsh/demultiplex.git \
-  -revision v0.3.4 \
+ nextflow run vsh/demultiplex \
+  -revision v0.3.9 \
   -main-script target/nextflow/workflows/runner/main.nf \
   --help
 ```
@@ -150,11 +150,12 @@ Having this project available locally, you can run the following command:
 nextflow run vsh/demultiplex \
 -r v0.3.9 \
 -main-script target/nextflow/runner/main.nf \
---input "gs://viash-hub-test-data/demultiplex/v3/demultiplex_htrnaseq_meta/SingleCell-RNA_P3_2"  \
+--input "gs://viash-hub-resources/demultiplex/v3/demultiplex_htrnaseq_meta/SingleCell-RNA_P3_2"  \
 --demultiplexer bclconvert \
+--skip_copycomplete_check \
 --publish_dir example_output/ \
 -profile docker \
--c labels.config
+-c src/config/labels.config
 ```
 
 ### (Optional) Resource usage tuning
diff --git a/target/executable/io/interop_summary_to_csv/.config.vsh.yaml b/target/executable/io/interop_summary_to_csv/.config.vsh.yaml
index 6cb1a4b..bf82918 100644
--- a/target/executable/io/interop_summary_to_csv/.config.vsh.yaml
+++ b/target/executable/io/interop_summary_to_csv/.config.vsh.yaml
@@ -151,9 +151,9 @@ build_info:
   output: "target/executable/io/interop_summary_to_csv"
   executable: "target/executable/io/interop_summary_to_csv/interop_summary_to_csv"
   viash_version: "0.9.4"
-  git_commit: "d755985664a702ccc854d0cb3caa1f86166b669b"
+  git_commit: "b963aed523a223ab3571d3c449901766c632811d"
   git_remote: "https://github.com/viash-hub/demultiplex"
-  git_tag: "v0.1.1-28-gd755985"
+  git_tag: "v0.1.1-29-gb963aed"
 package_config:
   name: "demultiplex"
   version: "update-readme"
diff --git a/target/executable/io/interop_summary_to_csv/interop_summary_to_csv b/target/executable/io/interop_summary_to_csv/interop_summary_to_csv
index fa7343f..8e3591e 100755
--- a/target/executable/io/interop_summary_to_csv/interop_summary_to_csv
+++ b/target/executable/io/interop_summary_to_csv/interop_summary_to_csv
@@ -454,9 +454,9 @@ tar -C /tmp/ --no-same-owner --no-same-permissions -xvf /tmp/interop.tar.gz && \
 mv /tmp/interop-1.3.1-Linux-GNU/bin/index-summary /tmp/interop-1.3.1-Linux-GNU/bin/summary /usr/local/bin/
 
 LABEL org.opencontainers.image.description="Companion container for running component io interop_summary_to_csv"
-LABEL org.opencontainers.image.created="2025-05-06T07:42:19Z"
+LABEL org.opencontainers.image.created="2025-05-06T09:10:44Z"
 LABEL org.opencontainers.image.source="https://github.com/viash-hub/demultiplex"
-LABEL org.opencontainers.image.revision="d755985664a702ccc854d0cb3caa1f86166b669b"
+LABEL org.opencontainers.image.revision="b963aed523a223ab3571d3c449901766c632811d"
 LABEL org.opencontainers.image.version="update-readme"
 
 VIASHDOCKER
diff --git a/target/executable/io/publish/.config.vsh.yaml b/target/executable/io/publish/.config.vsh.yaml
index 0d60af1..38f55f7 100644
--- a/target/executable/io/publish/.config.vsh.yaml
+++ b/target/executable/io/publish/.config.vsh.yaml
@@ -199,9 +199,9 @@ build_info:
   output: "target/executable/io/publish"
   executable: "target/executable/io/publish/publish"
   viash_version: "0.9.4"
-  git_commit: "d755985664a702ccc854d0cb3caa1f86166b669b"
+  git_commit: "b963aed523a223ab3571d3c449901766c632811d"
   git_remote: "https://github.com/viash-hub/demultiplex"
-  git_tag: "v0.1.1-28-gd755985"
+  git_tag: "v0.1.1-29-gb963aed"
 package_config:
   name: "demultiplex"
   version: "update-readme"
diff --git a/target/executable/io/publish/publish b/target/executable/io/publish/publish
index 926d52a..dd585f9 100755
--- a/target/executable/io/publish/publish
+++ b/target/executable/io/publish/publish
@@ -450,9 +450,9 @@ RUN apt-get update && \
   rm -rf /var/lib/apt/lists/*
 
 LABEL org.opencontainers.image.description="Companion container for running component io publish"
-LABEL org.opencontainers.image.created="2025-05-06T07:42:19Z"
+LABEL org.opencontainers.image.created="2025-05-06T09:10:44Z"
 LABEL org.opencontainers.image.source="https://github.com/viash-hub/demultiplex"
-LABEL org.opencontainers.image.revision="d755985664a702ccc854d0cb3caa1f86166b669b"
+LABEL org.opencontainers.image.revision="b963aed523a223ab3571d3c449901766c632811d"
 LABEL org.opencontainers.image.version="update-readme"
 
 VIASHDOCKER
diff --git a/target/executable/io/untar/.config.vsh.yaml b/target/executable/io/untar/.config.vsh.yaml
index a58fdf9..b28a21e 100644
--- a/target/executable/io/untar/.config.vsh.yaml
+++ b/target/executable/io/untar/.config.vsh.yaml
@@ -156,9 +156,9 @@ build_info:
   output: "target/executable/io/untar"
   executable: "target/executable/io/untar/untar"
   viash_version: "0.9.4"
-  git_commit: "d755985664a702ccc854d0cb3caa1f86166b669b"
+  git_commit: "b963aed523a223ab3571d3c449901766c632811d"
   git_remote: "https://github.com/viash-hub/demultiplex"
-  git_tag: "v0.1.1-28-gd755985"
+  git_tag: "v0.1.1-29-gb963aed"
 package_config:
   name: "demultiplex"
   version: "update-readme"
diff --git a/target/executable/io/untar/untar b/target/executable/io/untar/untar
index 13347d3..c650d51 100755
--- a/target/executable/io/untar/untar
+++ b/target/executable/io/untar/untar
@@ -450,9 +450,9 @@ RUN apt-get update && \
   rm -rf /var/lib/apt/lists/*
 
 LABEL org.opencontainers.image.description="Companion container for running component io untar"
-LABEL org.opencontainers.image.created="2025-05-06T07:42:19Z"
+LABEL org.opencontainers.image.created="2025-05-06T09:10:44Z"
 LABEL org.opencontainers.image.source="https://github.com/viash-hub/demultiplex"
-LABEL org.opencontainers.image.revision="d755985664a702ccc854d0cb3caa1f86166b669b"
+LABEL org.opencontainers.image.revision="b963aed523a223ab3571d3c449901766c632811d"
 LABEL org.opencontainers.image.version="update-readme"
 
 VIASHDOCKER
diff --git a/target/nextflow/dataflow/combine_samples/.config.vsh.yaml b/target/nextflow/dataflow/combine_samples/.config.vsh.yaml
index dce5699..dc3a45a 100644
--- a/target/nextflow/dataflow/combine_samples/.config.vsh.yaml
+++ b/target/nextflow/dataflow/combine_samples/.config.vsh.yaml
@@ -165,9 +165,9 @@ build_info:
   output: "target/nextflow/dataflow/combine_samples"
   executable: "target/nextflow/dataflow/combine_samples/main.nf"
   viash_version: "0.9.4"
-  git_commit: "d755985664a702ccc854d0cb3caa1f86166b669b"
+  git_commit: "b963aed523a223ab3571d3c449901766c632811d"
   git_remote: "https://github.com/viash-hub/demultiplex"
-  git_tag: "v0.1.1-28-gd755985"
+  git_tag: "v0.1.1-29-gb963aed"
 package_config:
   name: "demultiplex"
   version: "update-readme"
diff --git a/target/nextflow/dataflow/combine_samples/main.nf b/target/nextflow/dataflow/combine_samples/main.nf
index 36258e9..c6c06ee 100644
--- a/target/nextflow/dataflow/combine_samples/main.nf
+++ b/target/nextflow/dataflow/combine_samples/main.nf
@@ -3230,9 +3230,9 @@ meta = [
     "engine" : "native|native",
     "output" : "target/nextflow/dataflow/combine_samples",
     "viash_version" : "0.9.4",
-    "git_commit" : "d755985664a702ccc854d0cb3caa1f86166b669b",
+    "git_commit" : "b963aed523a223ab3571d3c449901766c632811d",
     "git_remote" : "https://github.com/viash-hub/demultiplex",
-    "git_tag" : "v0.1.1-28-gd755985"
+    "git_tag" : "v0.1.1-29-gb963aed"
   },
   "package_config" : {
     "name" : "demultiplex",
diff --git a/target/nextflow/dataflow/gather_fastqs_and_validate/.config.vsh.yaml b/target/nextflow/dataflow/gather_fastqs_and_validate/.config.vsh.yaml
index 26fdcf8..c3d0bf5 100644
--- a/target/nextflow/dataflow/gather_fastqs_and_validate/.config.vsh.yaml
+++ b/target/nextflow/dataflow/gather_fastqs_and_validate/.config.vsh.yaml
@@ -141,9 +141,9 @@ build_info:
   output: "target/nextflow/dataflow/gather_fastqs_and_validate"
   executable: "target/nextflow/dataflow/gather_fastqs_and_validate/main.nf"
   viash_version: "0.9.4"
-  git_commit: "d755985664a702ccc854d0cb3caa1f86166b669b"
+  git_commit: "b963aed523a223ab3571d3c449901766c632811d"
   git_remote: "https://github.com/viash-hub/demultiplex"
-  git_tag: "v0.1.1-28-gd755985"
+  git_tag: "v0.1.1-29-gb963aed"
 package_config:
   name: "demultiplex"
   version: "update-readme"
diff --git a/target/nextflow/dataflow/gather_fastqs_and_validate/main.nf b/target/nextflow/dataflow/gather_fastqs_and_validate/main.nf
index 469220f..d08dd45 100644
--- a/target/nextflow/dataflow/gather_fastqs_and_validate/main.nf
+++ b/target/nextflow/dataflow/gather_fastqs_and_validate/main.nf
@@ -3203,9 +3203,9 @@ meta = [
     "engine" : "native|native",
     "output" : "target/nextflow/dataflow/gather_fastqs_and_validate",
     "viash_version" : "0.9.4",
-    "git_commit" : "d755985664a702ccc854d0cb3caa1f86166b669b",
+    "git_commit" : "b963aed523a223ab3571d3c449901766c632811d",
     "git_remote" : "https://github.com/viash-hub/demultiplex",
-    "git_tag" : "v0.1.1-28-gd755985"
+    "git_tag" : "v0.1.1-29-gb963aed"
   },
   "package_config" : {
     "name" : "demultiplex",
diff --git a/target/nextflow/demultiplex/.config.vsh.yaml b/target/nextflow/demultiplex/.config.vsh.yaml
index 23e3c0b..4e7c696 100644
--- a/target/nextflow/demultiplex/.config.vsh.yaml
+++ b/target/nextflow/demultiplex/.config.vsh.yaml
@@ -247,9 +247,9 @@ build_info:
   output: "target/nextflow/demultiplex"
   executable: "target/nextflow/demultiplex/main.nf"
   viash_version: "0.9.4"
-  git_commit: "d755985664a702ccc854d0cb3caa1f86166b669b"
+  git_commit: "b963aed523a223ab3571d3c449901766c632811d"
   git_remote: "https://github.com/viash-hub/demultiplex"
-  git_tag: "v0.1.1-28-gd755985"
+  git_tag: "v0.1.1-29-gb963aed"
   dependencies:
   - "target/nextflow/io/untar"
   - "target/nextflow/dataflow/gather_fastqs_and_validate"
diff --git a/target/nextflow/demultiplex/main.nf b/target/nextflow/demultiplex/main.nf
index 64d19af..22802e0 100644
--- a/target/nextflow/demultiplex/main.nf
+++ b/target/nextflow/demultiplex/main.nf
@@ -3350,9 +3350,9 @@ meta = [
     "engine" : "native|native",
     "output" : "target/nextflow/demultiplex",
     "viash_version" : "0.9.4",
-    "git_commit" : "d755985664a702ccc854d0cb3caa1f86166b669b",
+    "git_commit" : "b963aed523a223ab3571d3c449901766c632811d",
     "git_remote" : "https://github.com/viash-hub/demultiplex",
-    "git_tag" : "v0.1.1-28-gd755985"
+    "git_tag" : "v0.1.1-29-gb963aed"
   },
   "package_config" : {
     "name" : "demultiplex",
diff --git a/target/nextflow/io/interop_summary_to_csv/.config.vsh.yaml b/target/nextflow/io/interop_summary_to_csv/.config.vsh.yaml
index 3881173..c8cd960 100644
--- a/target/nextflow/io/interop_summary_to_csv/.config.vsh.yaml
+++ b/target/nextflow/io/interop_summary_to_csv/.config.vsh.yaml
@@ -151,9 +151,9 @@ build_info:
   output: "target/nextflow/io/interop_summary_to_csv"
   executable: "target/nextflow/io/interop_summary_to_csv/main.nf"
   viash_version: "0.9.4"
-  git_commit: "d755985664a702ccc854d0cb3caa1f86166b669b"
+  git_commit: "b963aed523a223ab3571d3c449901766c632811d"
   git_remote: "https://github.com/viash-hub/demultiplex"
-  git_tag: "v0.1.1-28-gd755985"
+  git_tag: "v0.1.1-29-gb963aed"
 package_config:
   name: "demultiplex"
   version: "update-readme"
diff --git a/target/nextflow/io/interop_summary_to_csv/main.nf b/target/nextflow/io/interop_summary_to_csv/main.nf
index d9c7957..134329a 100644
--- a/target/nextflow/io/interop_summary_to_csv/main.nf
+++ b/target/nextflow/io/interop_summary_to_csv/main.nf
@@ -3217,9 +3217,9 @@ meta = [
     "engine" : "docker|native",
     "output" : "target/nextflow/io/interop_summary_to_csv",
     "viash_version" : "0.9.4",
-    "git_commit" : "d755985664a702ccc854d0cb3caa1f86166b669b",
+    "git_commit" : "b963aed523a223ab3571d3c449901766c632811d",
     "git_remote" : "https://github.com/viash-hub/demultiplex",
-    "git_tag" : "v0.1.1-28-gd755985"
+    "git_tag" : "v0.1.1-29-gb963aed"
   },
   "package_config" : {
     "name" : "demultiplex",
diff --git a/target/nextflow/io/publish/.config.vsh.yaml b/target/nextflow/io/publish/.config.vsh.yaml
index 6e36d31..95a4662 100644
--- a/target/nextflow/io/publish/.config.vsh.yaml
+++ b/target/nextflow/io/publish/.config.vsh.yaml
@@ -199,9 +199,9 @@ build_info:
   output: "target/nextflow/io/publish"
   executable: "target/nextflow/io/publish/main.nf"
   viash_version: "0.9.4"
-  git_commit: "d755985664a702ccc854d0cb3caa1f86166b669b"
+  git_commit: "b963aed523a223ab3571d3c449901766c632811d"
   git_remote: "https://github.com/viash-hub/demultiplex"
-  git_tag: "v0.1.1-28-gd755985"
+  git_tag: "v0.1.1-29-gb963aed"
 package_config:
   name: "demultiplex"
   version: "update-readme"
diff --git a/target/nextflow/io/publish/main.nf b/target/nextflow/io/publish/main.nf
index 362e47c..7c79ecf 100644
--- a/target/nextflow/io/publish/main.nf
+++ b/target/nextflow/io/publish/main.nf
@@ -3274,9 +3274,9 @@ meta = [
     "engine" : "docker|native",
     "output" : "target/nextflow/io/publish",
     "viash_version" : "0.9.4",
-    "git_commit" : "d755985664a702ccc854d0cb3caa1f86166b669b",
+    "git_commit" : "b963aed523a223ab3571d3c449901766c632811d",
     "git_remote" : "https://github.com/viash-hub/demultiplex",
-    "git_tag" : "v0.1.1-28-gd755985"
+    "git_tag" : "v0.1.1-29-gb963aed"
   },
   "package_config" : {
     "name" : "demultiplex",
diff --git a/target/nextflow/io/untar/.config.vsh.yaml b/target/nextflow/io/untar/.config.vsh.yaml
index 8cafb3f..bf021cc 100644
--- a/target/nextflow/io/untar/.config.vsh.yaml
+++ b/target/nextflow/io/untar/.config.vsh.yaml
@@ -156,9 +156,9 @@ build_info:
   output: "target/nextflow/io/untar"
   executable: "target/nextflow/io/untar/main.nf"
   viash_version: "0.9.4"
-  git_commit: "d755985664a702ccc854d0cb3caa1f86166b669b"
+  git_commit: "b963aed523a223ab3571d3c449901766c632811d"
   git_remote: "https://github.com/viash-hub/demultiplex"
-  git_tag: "v0.1.1-28-gd755985"
+  git_tag: "v0.1.1-29-gb963aed"
 package_config:
   name: "demultiplex"
   version: "update-readme"
diff --git a/target/nextflow/io/untar/main.nf b/target/nextflow/io/untar/main.nf
index d382d87..05b9760 100644
--- a/target/nextflow/io/untar/main.nf
+++ b/target/nextflow/io/untar/main.nf
@@ -3227,9 +3227,9 @@ meta = [
     "engine" : "docker|native",
     "output" : "target/nextflow/io/untar",
     "viash_version" : "0.9.4",
-    "git_commit" : "d755985664a702ccc854d0cb3caa1f86166b669b",
+    "git_commit" : "b963aed523a223ab3571d3c449901766c632811d",
     "git_remote" : "https://github.com/viash-hub/demultiplex",
-    "git_tag" : "v0.1.1-28-gd755985"
+    "git_tag" : "v0.1.1-29-gb963aed"
   },
   "package_config" : {
     "name" : "demultiplex",
diff --git a/target/nextflow/runner/.config.vsh.yaml b/target/nextflow/runner/.config.vsh.yaml
index 4e8a8dc..1c001fc 100644
--- a/target/nextflow/runner/.config.vsh.yaml
+++ b/target/nextflow/runner/.config.vsh.yaml
@@ -195,9 +195,9 @@ build_info:
   output: "target/nextflow/runner"
   executable: "target/nextflow/runner/main.nf"
   viash_version: "0.9.4"
-  git_commit: "d755985664a702ccc854d0cb3caa1f86166b669b"
+  git_commit: "b963aed523a223ab3571d3c449901766c632811d"
   git_remote: "https://github.com/viash-hub/demultiplex"
-  git_tag: "v0.1.1-28-gd755985"
+  git_tag: "v0.1.1-29-gb963aed"
   dependencies:
   - "target/nextflow/demultiplex"
   - "target/nextflow/io/publish"
diff --git a/target/nextflow/runner/main.nf b/target/nextflow/runner/main.nf
index ddc8285..9b3b316 100644
--- a/target/nextflow/runner/main.nf
+++ b/target/nextflow/runner/main.nf
@@ -3270,9 +3270,9 @@ meta = [
     "engine" : "native|native",
     "output" : "target/nextflow/runner",
     "viash_version" : "0.9.4",
-    "git_commit" : "d755985664a702ccc854d0cb3caa1f86166b669b",
+    "git_commit" : "b963aed523a223ab3571d3c449901766c632811d",
     "git_remote" : "https://github.com/viash-hub/demultiplex",
-    "git_tag" : "v0.1.1-28-gd755985"
+    "git_tag" : "v0.1.1-29-gb963aed"
   },
   "package_config" : {
     "name" : "demultiplex",