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Build branch htrnaseq/update_craftbox with version update_craftbox to htrnaseq on branch update_craftbox (e6da525)

Browse Source 
Build pipeline: viash-hub.htrnaseq.update-craftbox-72r5f

Source commit: e6da525fc5

Source message: Merge branch 'main' into update_craftbox
This commit is contained in:
CI
2025-09-02 14:47:29 +00:00
parent b1f45f4bb8
commit 0274f3004c
111 changed files with 1553 additions and 573 deletions
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5
target/executable/integration_test_components/htrnaseq/check_eset/.config.vsh.yaml
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@@ -155,9 +155,8 @@ build_info:
output: "target/executable/integration_test_components/htrnaseq/check_eset"
executable: "target/executable/integration_test_components/htrnaseq/check_eset/check_eset"
viash_version: "0.9.4"
git_commit: "1c55b605604da158bbbc23e79aa1b3d28211790c"
git_commit: "e6da525fc57aaec74f348eb974b68faa647bf800"
git_remote: "https://github.com/viash-hub/htrnaseq"
git_tag: "v0.7.2-15-g1c55b60"
package_config:
name: "htrnaseq"
version: "update_craftbox"
@@ -187,7 +186,7 @@ package_config:
target: "target"
config_mods:
- ".requirements.commands := ['ps']\n.runners[.type == 'nextflow'].config.script\
\ := 'includeConfig(\"nextflow_labels.config\")'\n.resources += {path: '/src/config/labels.config',\
\ += 'includeConfig(\"nextflow_labels.config\")'\n.resources += {path: '/src/config/labels.config',\
\ dest: 'nextflow_labels.config'}\n.resources += {path: '/_viash.yaml', dest:\
\ '_viash.yaml'}\n"
- ".engines += { type: \"native\" }"

2
target/executable/integration_test_components/htrnaseq/check_eset/_viash.yaml
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@@ -14,7 +14,7 @@ info:
dest: resources_test
config_mods: |
.requirements.commands := ['ps']
.runners[.type == 'nextflow'].config.script := 'includeConfig("nextflow_labels.config")'
.runners[.type == 'nextflow'].config.script += 'includeConfig("nextflow_labels.config")'
.resources += {path: '/src/config/labels.config', dest: 'nextflow_labels.config'}
.resources += {path: '/_viash.yaml', dest: '_viash.yaml'}
version: update_craftbox

4
target/executable/integration_test_components/htrnaseq/check_eset/check_eset
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@@ -455,9 +455,9 @@ RUN Rscript -e 'options(warn = 2); if (!requireNamespace("remotes", quietly = TR
LABEL org.opencontainers.image.authors="Dries Schaumont"
LABEL org.opencontainers.image.description="Companion container for running component integration_test_components/htrnaseq check_eset"
LABEL org.opencontainers.image.created="2025-08-28T14:01:17Z"
LABEL org.opencontainers.image.created="2025-09-02T13:54:52Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq"
LABEL org.opencontainers.image.revision="1c55b605604da158bbbc23e79aa1b3d28211790c"
LABEL org.opencontainers.image.revision="e6da525fc57aaec74f348eb974b68faa647bf800"
LABEL org.opencontainers.image.version="update_craftbox"
VIASHDOCKER

5
target/executable/integration_test_components/well_demultiplexing/check_cutadapt_output/.config.vsh.yaml
View File

@@ -164,9 +164,8 @@ build_info:
output: "target/executable/integration_test_components/well_demultiplexing/check_cutadapt_output"
executable: "target/executable/integration_test_components/well_demultiplexing/check_cutadapt_output/check_cutadapt_output"
viash_version: "0.9.4"
git_commit: "1c55b605604da158bbbc23e79aa1b3d28211790c"
git_commit: "e6da525fc57aaec74f348eb974b68faa647bf800"
git_remote: "https://github.com/viash-hub/htrnaseq"
git_tag: "v0.7.2-15-g1c55b60"
package_config:
name: "htrnaseq"
version: "update_craftbox"
@@ -196,7 +195,7 @@ package_config:
target: "target"
config_mods:
- ".requirements.commands := ['ps']\n.runners[.type == 'nextflow'].config.script\
\ := 'includeConfig(\"nextflow_labels.config\")'\n.resources += {path: '/src/config/labels.config',\
\ += 'includeConfig(\"nextflow_labels.config\")'\n.resources += {path: '/src/config/labels.config',\
\ dest: 'nextflow_labels.config'}\n.resources += {path: '/_viash.yaml', dest:\
\ '_viash.yaml'}\n"
- ".engines += { type: \"native\" }"

2
target/executable/integration_test_components/well_demultiplexing/check_cutadapt_output/_viash.yaml
View File

@@ -14,7 +14,7 @@ info:
dest: resources_test
config_mods: |
.requirements.commands := ['ps']
.runners[.type == 'nextflow'].config.script := 'includeConfig("nextflow_labels.config")'
.runners[.type == 'nextflow'].config.script += 'includeConfig("nextflow_labels.config")'
.resources += {path: '/src/config/labels.config', dest: 'nextflow_labels.config'}
.resources += {path: '/_viash.yaml', dest: '_viash.yaml'}
version: update_craftbox

4
target/executable/integration_test_components/well_demultiplexing/check_cutadapt_output/check_cutadapt_output
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@@ -457,9 +457,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries Schaumont"
LABEL org.opencontainers.image.description="Companion container for running component integration_test_components/well_demultiplexing check_cutadapt_output"
LABEL org.opencontainers.image.created="2025-08-28T14:01:17Z"
LABEL org.opencontainers.image.created="2025-09-02T13:54:52Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq"
LABEL org.opencontainers.image.revision="1c55b605604da158bbbc23e79aa1b3d28211790c"
LABEL org.opencontainers.image.revision="e6da525fc57aaec74f348eb974b68faa647bf800"
LABEL org.opencontainers.image.version="update_craftbox"
VIASHDOCKER