Build branch main with version main (0cb29cf)

Build pipeline: viash-hub.htrnaseq.main-92wqj

Source commit: 0cb29cf43a

Source message: Keep well demultiplexing output split per sequencing run (#49)

target/executable/eset/create_fdata/.config.vsh.yaml

@@ -70,6 +70,9 @@ test_resources:
   path: "test_annotation.gtf"
 info: null
 status: "enabled"
+scope:
+  image: "public"
+  target: "public"
 requirements:
   commands:
   - "ps"
@@ -176,8 +179,8 @@ build_info:
   engine: "docker|native"
   output: "target/executable/eset/create_fdata"
   executable: "target/executable/eset/create_fdata/create_fdata"
-  viash_version: "0.9.0"
-  git_commit: "ebb533e98281cfd73643b91029d1759f26d69f55"
+  viash_version: "0.9.2"
+  git_commit: "0cb29cf43ad6d7a669cc207040c72b7e164985f6"
   git_remote: "https://github.com/viash-hub/htrnaseq"
 package_config:
   name: "htrnaseq"
@@ -187,7 +190,7 @@ package_config:
     test_resources:
     - path: "gs://viash-hub-test-data/htrnaseq/v1/"
       dest: "resources_test"
-  viash_version: "0.9.0"
+  viash_version: "0.9.2"
   source: "src"
   target: "target"
   config_mods:

target/executable/eset/create_fdata/create_fdata

@@ -2,7 +2,7 @@
 
 # create_fdata main
 # 
-# This wrapper script is auto-generated by viash 0.9.0 and is thus a derivative
+# This wrapper script is auto-generated by viash 0.9.2 and is thus a derivative
 # work thereof. This software comes with ABSOLUTELY NO WARRANTY from Data
 # Intuitive.
 # 
@@ -173,26 +173,6 @@ VIASH_META_CONFIG="$VIASH_META_RESOURCES_DIR/.config.vsh.yaml"
 VIASH_META_TEMP_DIR="$VIASH_TEMP"
 
 
-# ViashHelp: Display helpful explanation about this executable
-function ViashHelp {
-  echo "create_fdata main"
-  echo ""
-  echo "Create a fdata file"
-  echo ""
-  echo "Arguments:"
-  echo "    --gtf"
-  echo "        type: file, required parameter, file must exist"
-  echo "        Genome annotation file in GTF format."
-  echo ""
-  echo "    --output"
-  echo "        type: file, output, file must exist"
-  echo "        default: fData.\$id.txt"
-  echo "        Tab-delimited text file containing information about the 'gene' or"
-  echo "        'transcript'"
-  echo "        entries from the input GTF file. The 'transcript' entries are used in"
-  echo "        case the source"
-  echo "        of the GTF was 'refGene' or 'ncbiRefSeq'."
-}
 
 # initialise variables
 VIASH_MODE='run'
@@ -478,9 +458,9 @@ RUN pip install --upgrade pip && \
 
 LABEL org.opencontainers.image.authors="Dries Schaumont, Marijke Van Moerbeke"
 LABEL org.opencontainers.image.description="Companion container for running component eset create_fdata"
-LABEL org.opencontainers.image.created="2025-03-20T08:25:13Z"
+LABEL org.opencontainers.image.created="2025-03-27T12:20:06Z"
 LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq"
-LABEL org.opencontainers.image.revision="ebb533e98281cfd73643b91029d1759f26d69f55"
+LABEL org.opencontainers.image.revision="0cb29cf43ad6d7a669cc207040c72b7e164985f6"
 LABEL org.opencontainers.image.version="main"
 
 VIASHDOCKER
@@ -595,6 +575,52 @@ fi
 # initialise docker variables
 VIASH_DOCKER_RUN_ARGS=(-i --rm)
 
+
+# ViashHelp: Display helpful explanation about this executable
+function ViashHelp {
+  echo "create_fdata main"
+  echo ""
+  echo "Create a fdata file"
+  echo ""
+  echo "Arguments:"
+  echo "    --gtf"
+  echo "        type: file, required parameter, file must exist"
+  echo "        Genome annotation file in GTF format."
+  echo ""
+  echo "    --output"
+  echo "        type: file, output, file must exist"
+  echo "        default: fData.\$id.txt"
+  echo "        Tab-delimited text file containing information about the 'gene' or"
+  echo "        'transcript'"
+  echo "        entries from the input GTF file. The 'transcript' entries are used in"
+  echo "        case the source"
+  echo "        of the GTF was 'refGene' or 'ncbiRefSeq'."
+  echo ""
+  echo "Viash built in Computational Requirements:"
+  echo "    ---cpus=INT"
+  echo "        Number of CPUs to use"
+  echo "    ---memory=STRING"
+  echo "        Amount of memory to use. Examples: 4GB, 3MiB."
+  echo ""
+  echo "Viash built in Docker:"
+  echo "    ---setup=STRATEGY"
+  echo "        Setup the docker container. Options are: alwaysbuild, alwayscachedbuild, ifneedbebuild, ifneedbecachedbuild, alwayspull, alwayspullelsebuild, alwayspullelsecachedbuild, ifneedbepull, ifneedbepullelsebuild, ifneedbepullelsecachedbuild, push, pushifnotpresent, donothing."
+  echo "        Default: ifneedbepullelsecachedbuild"
+  echo "    ---dockerfile"
+  echo "        Print the dockerfile to stdout."
+  echo "    ---docker_run_args=ARG"
+  echo "        Provide runtime arguments to Docker. See the documentation on \`docker run\` for more information."
+  echo "    ---docker_image_id"
+  echo "        Print the docker image id to stdout."
+  echo "    ---debug"
+  echo "        Enter the docker container for debugging purposes."
+  echo ""
+  echo "Viash built in Engines:"
+  echo "    ---engine=ENGINE_ID"
+  echo "        Specify the engine to use. Options are: docker, native."
+  echo "        Default: docker"
+}
+
 # initialise array
 VIASH_POSITIONAL_ARGS=''