vsh/htrnaseq
1
0
Fork 0
Code Issues Pull Requests Actions Packages Projects Releases Wiki Activity

Build branch main with version main (55b0251)

Browse Source 
Build pipeline: viash-hub.htrnaseq.main-ddh59

Source commit: 55b025124d

Source message: Add ignore parameter (#39)
This commit is contained in:
CI
2025-02-14 11:38:08 +00:00
parent 9eac6fff21
commit 96e74933b4
65 changed files with 181 additions and 82 deletions
Download Patch File Download Diff File Expand all files Collapse all files

2
target/executable/eset/create_eset/.config.vsh.yaml
View File

@@ -198,7 +198,7 @@ build_info:
output: "target/executable/eset/create_eset"
executable: "target/executable/eset/create_eset/create_eset"
viash_version: "0.9.0"
git_commit: "900f5ed35659137aa5c62d183232e0f33de97873"
git_commit: "55b025124d174ff062636130a44b7165be74d3da"
git_remote: "https://github.com/viash-hub/htrnaseq"
package_config:
name: "htrnaseq"

4
target/executable/eset/create_eset/create_eset
View File

@@ -477,9 +477,9 @@ RUN Rscript -e 'if (!requireNamespace("remotes", quietly = TRUE)) install.packag
LABEL org.opencontainers.image.authors="Dries Schaumont, Marijke Van Moerbeke"
LABEL org.opencontainers.image.description="Companion container for running component eset create_eset"
LABEL org.opencontainers.image.created="2025-02-13T15:18:38Z"
LABEL org.opencontainers.image.created="2025-02-14T10:51:19Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq"
LABEL org.opencontainers.image.revision="900f5ed35659137aa5c62d183232e0f33de97873"
LABEL org.opencontainers.image.revision="55b025124d174ff062636130a44b7165be74d3da"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER

2
target/executable/eset/create_fdata/.config.vsh.yaml
View File

@@ -177,7 +177,7 @@ build_info:
output: "target/executable/eset/create_fdata"
executable: "target/executable/eset/create_fdata/create_fdata"
viash_version: "0.9.0"
git_commit: "900f5ed35659137aa5c62d183232e0f33de97873"
git_commit: "55b025124d174ff062636130a44b7165be74d3da"
git_remote: "https://github.com/viash-hub/htrnaseq"
package_config:
name: "htrnaseq"

4
target/executable/eset/create_fdata/create_fdata
View File

@@ -478,9 +478,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries Schaumont, Marijke Van Moerbeke"
LABEL org.opencontainers.image.description="Companion container for running component eset create_fdata"
LABEL org.opencontainers.image.created="2025-02-13T15:18:38Z"
LABEL org.opencontainers.image.created="2025-02-14T10:51:20Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq"
LABEL org.opencontainers.image.revision="900f5ed35659137aa5c62d183232e0f33de97873"
LABEL org.opencontainers.image.revision="55b025124d174ff062636130a44b7165be74d3da"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER

2
target/executable/eset/create_pdata/.config.vsh.yaml
View File

@@ -191,7 +191,7 @@ build_info:
output: "target/executable/eset/create_pdata"
executable: "target/executable/eset/create_pdata/create_pdata"
viash_version: "0.9.0"
git_commit: "900f5ed35659137aa5c62d183232e0f33de97873"
git_commit: "55b025124d174ff062636130a44b7165be74d3da"
git_remote: "https://github.com/viash-hub/htrnaseq"
package_config:
name: "htrnaseq"

4
target/executable/eset/create_pdata/create_pdata
View File

@@ -488,9 +488,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries Schaumont, Marijke Van Moerbeke"
LABEL org.opencontainers.image.description="Companion container for running component eset create_pdata"
LABEL org.opencontainers.image.created="2025-02-13T15:18:38Z"
LABEL org.opencontainers.image.created="2025-02-14T10:51:19Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq"
LABEL org.opencontainers.image.revision="900f5ed35659137aa5c62d183232e0f33de97873"
LABEL org.opencontainers.image.revision="55b025124d174ff062636130a44b7165be74d3da"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER

2
target/executable/integration_test_components/htrnaseq/check_eset/.config.vsh.yaml
View File

@@ -148,7 +148,7 @@ build_info:
output: "target/executable/integration_test_components/htrnaseq/check_eset"
executable: "target/executable/integration_test_components/htrnaseq/check_eset/check_eset"
viash_version: "0.9.0"
git_commit: "900f5ed35659137aa5c62d183232e0f33de97873"
git_commit: "55b025124d174ff062636130a44b7165be74d3da"
git_remote: "https://github.com/viash-hub/htrnaseq"
package_config:
name: "htrnaseq"

4
target/executable/integration_test_components/htrnaseq/check_eset/check_eset
View File

@@ -470,9 +470,9 @@ RUN Rscript -e 'if (!requireNamespace("remotes", quietly = TRUE)) install.packag
LABEL org.opencontainers.image.authors="Dries Schaumont"
LABEL org.opencontainers.image.description="Companion container for running component integration_test_components/htrnaseq check_eset"
LABEL org.opencontainers.image.created="2025-02-13T15:18:38Z"
LABEL org.opencontainers.image.created="2025-02-14T10:51:19Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq"
LABEL org.opencontainers.image.revision="900f5ed35659137aa5c62d183232e0f33de97873"
LABEL org.opencontainers.image.revision="55b025124d174ff062636130a44b7165be74d3da"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER

2
target/executable/integration_test_components/well_demultiplexing/check_cutadapt_output/.config.vsh.yaml
View File

@@ -158,7 +158,7 @@ build_info:
output: "target/executable/integration_test_components/well_demultiplexing/check_cutadapt_output"
executable: "target/executable/integration_test_components/well_demultiplexing/check_cutadapt_output/check_cutadapt_output"
viash_version: "0.9.0"
git_commit: "900f5ed35659137aa5c62d183232e0f33de97873"
git_commit: "55b025124d174ff062636130a44b7165be74d3da"
git_remote: "https://github.com/viash-hub/htrnaseq"
package_config:
name: "htrnaseq"

4
target/executable/integration_test_components/well_demultiplexing/check_cutadapt_output/check_cutadapt_output
View File

@@ -476,9 +476,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries Schaumont"
LABEL org.opencontainers.image.description="Companion container for running component integration_test_components/well_demultiplexing check_cutadapt_output"
LABEL org.opencontainers.image.created="2025-02-13T15:18:38Z"
LABEL org.opencontainers.image.created="2025-02-14T10:51:19Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq"
LABEL org.opencontainers.image.revision="900f5ed35659137aa5c62d183232e0f33de97873"
LABEL org.opencontainers.image.revision="55b025124d174ff062636130a44b7165be74d3da"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER

2
target/executable/io/publish_fastqs/.config.vsh.yaml
View File

@@ -143,7 +143,7 @@ build_info:
output: "target/executable/io/publish_fastqs"
executable: "target/executable/io/publish_fastqs/publish_fastqs"
viash_version: "0.9.0"
git_commit: "900f5ed35659137aa5c62d183232e0f33de97873"
git_commit: "55b025124d174ff062636130a44b7165be74d3da"
git_remote: "https://github.com/viash-hub/htrnaseq"
package_config:
name: "htrnaseq"

4
target/executable/io/publish_fastqs/publish_fastqs
View File

@@ -470,9 +470,9 @@ RUN apt-get update && \
rm -rf /var/lib/apt/lists/*
LABEL org.opencontainers.image.description="Companion container for running component io publish_fastqs"
LABEL org.opencontainers.image.created="2025-02-13T15:18:36Z"
LABEL org.opencontainers.image.created="2025-02-14T10:51:18Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq"
LABEL org.opencontainers.image.revision="900f5ed35659137aa5c62d183232e0f33de97873"
LABEL org.opencontainers.image.revision="55b025124d174ff062636130a44b7165be74d3da"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER

2
target/executable/io/publish_results/.config.vsh.yaml
View File

@@ -187,7 +187,7 @@ build_info:
output: "target/executable/io/publish_results"
executable: "target/executable/io/publish_results/publish_results"
viash_version: "0.9.0"
git_commit: "900f5ed35659137aa5c62d183232e0f33de97873"
git_commit: "55b025124d174ff062636130a44b7165be74d3da"
git_remote: "https://github.com/viash-hub/htrnaseq"
package_config:
name: "htrnaseq"

4
target/executable/io/publish_results/publish_results
View File

@@ -484,9 +484,9 @@ RUN apt-get update && \
rm -rf /var/lib/apt/lists/*
LABEL org.opencontainers.image.description="Companion container for running component io publish_results"
LABEL org.opencontainers.image.created="2025-02-13T15:18:37Z"
LABEL org.opencontainers.image.created="2025-02-14T10:51:18Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq"
LABEL org.opencontainers.image.revision="900f5ed35659137aa5c62d183232e0f33de97873"
LABEL org.opencontainers.image.revision="55b025124d174ff062636130a44b7165be74d3da"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER

2
target/executable/parallel_map/.config.vsh.yaml
View File

@@ -279,7 +279,7 @@ build_info:
output: "target/executable/parallel_map"
executable: "target/executable/parallel_map/parallel_map"
viash_version: "0.9.0"
git_commit: "900f5ed35659137aa5c62d183232e0f33de97873"
git_commit: "55b025124d174ff062636130a44b7165be74d3da"
git_remote: "https://github.com/viash-hub/htrnaseq"
package_config:
name: "htrnaseq"

4
target/executable/parallel_map/parallel_map
View File

@@ -540,9 +540,9 @@ ENV STAR_BINARY=STAR
COPY STAR /usr/local/bin/$STAR_BINARY
LABEL org.opencontainers.image.authors="Dries Schaumont, Toni Verbeiren"
LABEL org.opencontainers.image.description="Companion container for running component parallel_map"
LABEL org.opencontainers.image.created="2025-02-13T15:18:39Z"
LABEL org.opencontainers.image.created="2025-02-14T10:51:20Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq"
LABEL org.opencontainers.image.revision="900f5ed35659137aa5c62d183232e0f33de97873"
LABEL org.opencontainers.image.revision="55b025124d174ff062636130a44b7165be74d3da"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER

2
target/executable/report/create_report/.config.vsh.yaml
View File

@@ -201,7 +201,7 @@ build_info:
output: "target/executable/report/create_report"
executable: "target/executable/report/create_report/create_report"
viash_version: "0.9.0"
git_commit: "900f5ed35659137aa5c62d183232e0f33de97873"
git_commit: "55b025124d174ff062636130a44b7165be74d3da"
git_remote: "https://github.com/viash-hub/htrnaseq"
package_config:
name: "htrnaseq"

4
target/executable/report/create_report/create_report
View File

@@ -476,9 +476,9 @@ RUN Rscript -e 'if (!requireNamespace("remotes", quietly = TRUE)) install.packag
LABEL org.opencontainers.image.authors="Dries Schaumont, Marijke Van Moerbeke"
LABEL org.opencontainers.image.description="Companion container for running component report create_report"
LABEL org.opencontainers.image.created="2025-02-13T15:18:39Z"
LABEL org.opencontainers.image.created="2025-02-14T10:51:20Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq"
LABEL org.opencontainers.image.revision="900f5ed35659137aa5c62d183232e0f33de97873"
LABEL org.opencontainers.image.revision="55b025124d174ff062636130a44b7165be74d3da"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER

2
target/executable/stats/combine_star_logs/.config.vsh.yaml
View File

@@ -198,7 +198,7 @@ build_info:
output: "target/executable/stats/combine_star_logs"
executable: "target/executable/stats/combine_star_logs/combine_star_logs"
viash_version: "0.9.0"
git_commit: "900f5ed35659137aa5c62d183232e0f33de97873"
git_commit: "55b025124d174ff062636130a44b7165be74d3da"
git_remote: "https://github.com/viash-hub/htrnaseq"
package_config:
name: "htrnaseq"

4
target/executable/stats/combine_star_logs/combine_star_logs
View File

@@ -490,9 +490,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries Schaumont"
LABEL org.opencontainers.image.description="Companion container for running component stats combine_star_logs"
LABEL org.opencontainers.image.created="2025-02-13T15:18:36Z"
LABEL org.opencontainers.image.created="2025-02-14T10:51:18Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq"
LABEL org.opencontainers.image.revision="900f5ed35659137aa5c62d183232e0f33de97873"
LABEL org.opencontainers.image.revision="55b025124d174ff062636130a44b7165be74d3da"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER

2
target/executable/stats/generate_pool_statistics/.config.vsh.yaml
View File

@@ -182,7 +182,7 @@ build_info:
output: "target/executable/stats/generate_pool_statistics"
executable: "target/executable/stats/generate_pool_statistics/generate_pool_statistics"
viash_version: "0.9.0"
git_commit: "900f5ed35659137aa5c62d183232e0f33de97873"
git_commit: "55b025124d174ff062636130a44b7165be74d3da"
git_remote: "https://github.com/viash-hub/htrnaseq"
package_config:
name: "htrnaseq"

4
target/executable/stats/generate_pool_statistics/generate_pool_statistics
View File

@@ -483,9 +483,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries Schaumont, Marijke Van Moerbeke"
LABEL org.opencontainers.image.description="Companion container for running component stats generate_pool_statistics"
LABEL org.opencontainers.image.created="2025-02-13T15:18:37Z"
LABEL org.opencontainers.image.created="2025-02-14T10:51:18Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq"
LABEL org.opencontainers.image.revision="900f5ed35659137aa5c62d183232e0f33de97873"
LABEL org.opencontainers.image.revision="55b025124d174ff062636130a44b7165be74d3da"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER

2
target/executable/stats/generate_well_statistics/.config.vsh.yaml
View File

@@ -262,7 +262,7 @@ build_info:
output: "target/executable/stats/generate_well_statistics"
executable: "target/executable/stats/generate_well_statistics/generate_well_statistics"
viash_version: "0.9.0"
git_commit: "900f5ed35659137aa5c62d183232e0f33de97873"
git_commit: "55b025124d174ff062636130a44b7165be74d3da"
git_remote: "https://github.com/viash-hub/htrnaseq"
package_config:
name: "htrnaseq"

4
target/executable/stats/generate_well_statistics/generate_well_statistics
View File

@@ -520,9 +520,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries Schaumont, Marijke Van Moerbeke"
LABEL org.opencontainers.image.description="Companion container for running component stats generate_well_statistics"
LABEL org.opencontainers.image.created="2025-02-13T15:18:37Z"
LABEL org.opencontainers.image.created="2025-02-14T10:51:19Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq"
LABEL org.opencontainers.image.revision="900f5ed35659137aa5c62d183232e0f33de97873"
LABEL org.opencontainers.image.revision="55b025124d174ff062636130a44b7165be74d3da"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER