diff --git a/CHANGELOG.md b/CHANGELOG.md index 0144070e..2f541c04 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -4,6 +4,9 @@ * Use `v0.3.0` version of cutadapt instead of `main` (PR #23 and PR #24). +* `create_eset`: Update base container image, `R` version and all dependencies + to newer versions (PR #28). + # demultiplex v0.2.0 # New functionality diff --git a/target/executable/eset/create_eset/.config.vsh.yaml b/target/executable/eset/create_eset/.config.vsh.yaml index 1df91e6c..1f250eeb 100644 --- a/target/executable/eset/create_eset/.config.vsh.yaml +++ b/target/executable/eset/create_eset/.config.vsh.yaml @@ -198,8 +198,8 @@ build_info: output: "target/executable/eset/create_eset" executable: "target/executable/eset/create_eset/create_eset" viash_version: "0.9.0" - git_commit: "9b6d4705446702e857a3f70a78629beae1f89beb" - git_remote: "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + git_commit: "1ec0b962068a41323a79fd96b47094d8fbbf6914" + git_remote: "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" package_config: name: "htrnaseq" version: "update_r" diff --git a/target/executable/eset/create_eset/create_eset b/target/executable/eset/create_eset/create_eset index 26ca5197..02d250eb 100755 --- a/target/executable/eset/create_eset/create_eset +++ b/target/executable/eset/create_eset/create_eset @@ -477,9 +477,9 @@ RUN Rscript -e 'if (!requireNamespace("remotes", quietly = TRUE)) install.packag LABEL org.opencontainers.image.authors="Dries Schaumont, Marijke Van Moerbeke" LABEL org.opencontainers.image.description="Companion container for running component eset create_eset" -LABEL org.opencontainers.image.created="2025-01-10T13:27:25Z" +LABEL org.opencontainers.image.created="2025-01-10T15:10:04Z" LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq" -LABEL org.opencontainers.image.revision="9b6d4705446702e857a3f70a78629beae1f89beb" +LABEL org.opencontainers.image.revision="1ec0b962068a41323a79fd96b47094d8fbbf6914" LABEL org.opencontainers.image.version="update_r" VIASHDOCKER diff --git a/target/executable/eset/create_fdata/.config.vsh.yaml b/target/executable/eset/create_fdata/.config.vsh.yaml index 9da73a36..4e006742 100644 --- a/target/executable/eset/create_fdata/.config.vsh.yaml +++ b/target/executable/eset/create_fdata/.config.vsh.yaml @@ -177,8 +177,8 @@ build_info: output: "target/executable/eset/create_fdata" executable: "target/executable/eset/create_fdata/create_fdata" viash_version: "0.9.0" - git_commit: "9b6d4705446702e857a3f70a78629beae1f89beb" - git_remote: "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + git_commit: "1ec0b962068a41323a79fd96b47094d8fbbf6914" + git_remote: "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" package_config: name: "htrnaseq" version: "update_r" diff --git a/target/executable/eset/create_fdata/create_fdata b/target/executable/eset/create_fdata/create_fdata index 67383db9..81dc91b1 100755 --- a/target/executable/eset/create_fdata/create_fdata +++ b/target/executable/eset/create_fdata/create_fdata @@ -478,9 +478,9 @@ RUN pip install --upgrade pip && \ LABEL org.opencontainers.image.authors="Dries Schaumont, Marijke Van Moerbeke" LABEL org.opencontainers.image.description="Companion container for running component eset create_fdata" -LABEL org.opencontainers.image.created="2025-01-10T13:27:27Z" +LABEL org.opencontainers.image.created="2025-01-10T15:10:05Z" LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq" -LABEL org.opencontainers.image.revision="9b6d4705446702e857a3f70a78629beae1f89beb" +LABEL org.opencontainers.image.revision="1ec0b962068a41323a79fd96b47094d8fbbf6914" LABEL org.opencontainers.image.version="update_r" VIASHDOCKER diff --git a/target/executable/eset/create_pdata/.config.vsh.yaml b/target/executable/eset/create_pdata/.config.vsh.yaml index 94c0ea22..daeacbea 100644 --- a/target/executable/eset/create_pdata/.config.vsh.yaml +++ b/target/executable/eset/create_pdata/.config.vsh.yaml @@ -191,8 +191,8 @@ build_info: output: "target/executable/eset/create_pdata" executable: "target/executable/eset/create_pdata/create_pdata" viash_version: "0.9.0" - git_commit: "9b6d4705446702e857a3f70a78629beae1f89beb" - git_remote: "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + git_commit: "1ec0b962068a41323a79fd96b47094d8fbbf6914" + git_remote: "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" package_config: name: "htrnaseq" version: "update_r" diff --git a/target/executable/eset/create_pdata/create_pdata b/target/executable/eset/create_pdata/create_pdata index dbc4e9f8..f079527b 100755 --- a/target/executable/eset/create_pdata/create_pdata +++ b/target/executable/eset/create_pdata/create_pdata @@ -488,9 +488,9 @@ RUN pip install --upgrade pip && \ LABEL org.opencontainers.image.authors="Dries Schaumont, Marijke Van Moerbeke" LABEL org.opencontainers.image.description="Companion container for running component eset create_pdata" -LABEL org.opencontainers.image.created="2025-01-10T13:27:25Z" +LABEL org.opencontainers.image.created="2025-01-10T15:10:03Z" LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq" -LABEL org.opencontainers.image.revision="9b6d4705446702e857a3f70a78629beae1f89beb" +LABEL org.opencontainers.image.revision="1ec0b962068a41323a79fd96b47094d8fbbf6914" LABEL org.opencontainers.image.version="update_r" VIASHDOCKER diff --git a/target/executable/integration_test_components/htrnaseq/check_eset/.config.vsh.yaml b/target/executable/integration_test_components/htrnaseq/check_eset/.config.vsh.yaml index e5bcd70c..ffe7f416 100644 --- a/target/executable/integration_test_components/htrnaseq/check_eset/.config.vsh.yaml +++ b/target/executable/integration_test_components/htrnaseq/check_eset/.config.vsh.yaml @@ -148,8 +148,8 @@ build_info: output: "target/executable/integration_test_components/htrnaseq/check_eset" executable: "target/executable/integration_test_components/htrnaseq/check_eset/check_eset" viash_version: "0.9.0" - git_commit: "9b6d4705446702e857a3f70a78629beae1f89beb" - git_remote: "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + git_commit: "1ec0b962068a41323a79fd96b47094d8fbbf6914" + git_remote: "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" package_config: name: "htrnaseq" version: "update_r" diff --git a/target/executable/integration_test_components/htrnaseq/check_eset/check_eset b/target/executable/integration_test_components/htrnaseq/check_eset/check_eset index e5854668..14e4b413 100755 --- a/target/executable/integration_test_components/htrnaseq/check_eset/check_eset +++ b/target/executable/integration_test_components/htrnaseq/check_eset/check_eset @@ -470,9 +470,9 @@ RUN Rscript -e 'if (!requireNamespace("remotes", quietly = TRUE)) install.packag LABEL org.opencontainers.image.authors="Dries Schaumont" LABEL org.opencontainers.image.description="Companion container for running component integration_test_components/htrnaseq check_eset" -LABEL org.opencontainers.image.created="2025-01-10T13:27:27Z" +LABEL org.opencontainers.image.created="2025-01-10T15:10:05Z" LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq" -LABEL org.opencontainers.image.revision="9b6d4705446702e857a3f70a78629beae1f89beb" +LABEL org.opencontainers.image.revision="1ec0b962068a41323a79fd96b47094d8fbbf6914" LABEL org.opencontainers.image.version="update_r" VIASHDOCKER diff --git a/target/executable/integration_test_components/well_demultiplexing/check_cutadapt_output/.config.vsh.yaml b/target/executable/integration_test_components/well_demultiplexing/check_cutadapt_output/.config.vsh.yaml index d3648134..13fb8915 100644 --- a/target/executable/integration_test_components/well_demultiplexing/check_cutadapt_output/.config.vsh.yaml +++ b/target/executable/integration_test_components/well_demultiplexing/check_cutadapt_output/.config.vsh.yaml @@ -158,8 +158,8 @@ build_info: output: "target/executable/integration_test_components/well_demultiplexing/check_cutadapt_output" executable: "target/executable/integration_test_components/well_demultiplexing/check_cutadapt_output/check_cutadapt_output" viash_version: "0.9.0" - git_commit: "9b6d4705446702e857a3f70a78629beae1f89beb" - git_remote: "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + git_commit: "1ec0b962068a41323a79fd96b47094d8fbbf6914" + git_remote: "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" package_config: name: "htrnaseq" version: "update_r" diff --git a/target/executable/integration_test_components/well_demultiplexing/check_cutadapt_output/check_cutadapt_output b/target/executable/integration_test_components/well_demultiplexing/check_cutadapt_output/check_cutadapt_output index 611276e6..baa2eb6a 100755 --- a/target/executable/integration_test_components/well_demultiplexing/check_cutadapt_output/check_cutadapt_output +++ b/target/executable/integration_test_components/well_demultiplexing/check_cutadapt_output/check_cutadapt_output @@ -476,9 +476,9 @@ RUN pip install --upgrade pip && \ LABEL org.opencontainers.image.authors="Dries Schaumont" LABEL org.opencontainers.image.description="Companion container for running component integration_test_components/well_demultiplexing check_cutadapt_output" -LABEL org.opencontainers.image.created="2025-01-10T13:27:26Z" +LABEL org.opencontainers.image.created="2025-01-10T15:10:05Z" LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq" -LABEL org.opencontainers.image.revision="9b6d4705446702e857a3f70a78629beae1f89beb" +LABEL org.opencontainers.image.revision="1ec0b962068a41323a79fd96b47094d8fbbf6914" LABEL org.opencontainers.image.version="update_r" VIASHDOCKER diff --git a/target/executable/parallel_map/.config.vsh.yaml b/target/executable/parallel_map/.config.vsh.yaml index 38649e57..c62aea30 100644 --- a/target/executable/parallel_map/.config.vsh.yaml +++ b/target/executable/parallel_map/.config.vsh.yaml @@ -264,8 +264,8 @@ build_info: output: "target/executable/parallel_map" executable: "target/executable/parallel_map/parallel_map" viash_version: "0.9.0" - git_commit: "9b6d4705446702e857a3f70a78629beae1f89beb" - git_remote: "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + git_commit: "1ec0b962068a41323a79fd96b47094d8fbbf6914" + git_remote: "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" package_config: name: "htrnaseq" version: "update_r" diff --git a/target/executable/parallel_map/parallel_map b/target/executable/parallel_map/parallel_map index 30d4260d..80396095 100755 --- a/target/executable/parallel_map/parallel_map +++ b/target/executable/parallel_map/parallel_map @@ -517,9 +517,9 @@ ENV STAR_BINARY=STAR COPY STAR /usr/local/bin/$STAR_BINARY LABEL org.opencontainers.image.authors="Dries Schaumont, Toni Verbeiren" LABEL org.opencontainers.image.description="Companion container for running component parallel_map" -LABEL org.opencontainers.image.created="2025-01-10T13:27:26Z" +LABEL org.opencontainers.image.created="2025-01-10T15:10:04Z" LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq" -LABEL org.opencontainers.image.revision="9b6d4705446702e857a3f70a78629beae1f89beb" +LABEL org.opencontainers.image.revision="1ec0b962068a41323a79fd96b47094d8fbbf6914" LABEL org.opencontainers.image.version="update_r" VIASHDOCKER diff --git a/target/executable/report/create_report/.config.vsh.yaml b/target/executable/report/create_report/.config.vsh.yaml index caec6e76..d4572dc1 100644 --- a/target/executable/report/create_report/.config.vsh.yaml +++ b/target/executable/report/create_report/.config.vsh.yaml @@ -201,8 +201,8 @@ build_info: output: "target/executable/report/create_report" executable: "target/executable/report/create_report/create_report" viash_version: "0.9.0" - git_commit: "9b6d4705446702e857a3f70a78629beae1f89beb" - git_remote: "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + git_commit: "1ec0b962068a41323a79fd96b47094d8fbbf6914" + git_remote: "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" package_config: name: "htrnaseq" version: "update_r" diff --git a/target/executable/report/create_report/create_report b/target/executable/report/create_report/create_report index dd2a661b..09eae3f4 100755 --- a/target/executable/report/create_report/create_report +++ b/target/executable/report/create_report/create_report @@ -476,9 +476,9 @@ RUN Rscript -e 'if (!requireNamespace("remotes", quietly = TRUE)) install.packag LABEL org.opencontainers.image.authors="Dries Schaumont, Marijke Van Moerbeke" LABEL org.opencontainers.image.description="Companion container for running component report create_report" -LABEL org.opencontainers.image.created="2025-01-10T13:27:26Z" +LABEL org.opencontainers.image.created="2025-01-10T15:10:04Z" LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq" -LABEL org.opencontainers.image.revision="9b6d4705446702e857a3f70a78629beae1f89beb" +LABEL org.opencontainers.image.revision="1ec0b962068a41323a79fd96b47094d8fbbf6914" LABEL org.opencontainers.image.version="update_r" VIASHDOCKER diff --git a/target/executable/stats/combine_star_logs/.config.vsh.yaml b/target/executable/stats/combine_star_logs/.config.vsh.yaml index 7801c06a..8749e625 100644 --- a/target/executable/stats/combine_star_logs/.config.vsh.yaml +++ b/target/executable/stats/combine_star_logs/.config.vsh.yaml @@ -198,8 +198,8 @@ build_info: output: "target/executable/stats/combine_star_logs" executable: "target/executable/stats/combine_star_logs/combine_star_logs" viash_version: "0.9.0" - git_commit: "9b6d4705446702e857a3f70a78629beae1f89beb" - git_remote: "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + git_commit: "1ec0b962068a41323a79fd96b47094d8fbbf6914" + git_remote: "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" package_config: name: "htrnaseq" version: "update_r" diff --git a/target/executable/stats/combine_star_logs/combine_star_logs b/target/executable/stats/combine_star_logs/combine_star_logs index 74ba8a2c..88757b6c 100755 --- a/target/executable/stats/combine_star_logs/combine_star_logs +++ b/target/executable/stats/combine_star_logs/combine_star_logs @@ -490,9 +490,9 @@ RUN pip install --upgrade pip && \ LABEL org.opencontainers.image.authors="Dries Schaumont" LABEL org.opencontainers.image.description="Companion container for running component stats combine_star_logs" -LABEL org.opencontainers.image.created="2025-01-10T13:27:25Z" +LABEL org.opencontainers.image.created="2025-01-10T15:10:04Z" LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq" -LABEL org.opencontainers.image.revision="9b6d4705446702e857a3f70a78629beae1f89beb" +LABEL org.opencontainers.image.revision="1ec0b962068a41323a79fd96b47094d8fbbf6914" LABEL org.opencontainers.image.version="update_r" VIASHDOCKER diff --git a/target/executable/stats/generate_pool_statistics/.config.vsh.yaml b/target/executable/stats/generate_pool_statistics/.config.vsh.yaml index 80b915b7..c1f1bd4d 100644 --- a/target/executable/stats/generate_pool_statistics/.config.vsh.yaml +++ b/target/executable/stats/generate_pool_statistics/.config.vsh.yaml @@ -182,8 +182,8 @@ build_info: output: "target/executable/stats/generate_pool_statistics" executable: "target/executable/stats/generate_pool_statistics/generate_pool_statistics" viash_version: "0.9.0" - git_commit: "9b6d4705446702e857a3f70a78629beae1f89beb" - git_remote: "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + git_commit: "1ec0b962068a41323a79fd96b47094d8fbbf6914" + git_remote: "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" package_config: name: "htrnaseq" version: "update_r" diff --git a/target/executable/stats/generate_pool_statistics/generate_pool_statistics b/target/executable/stats/generate_pool_statistics/generate_pool_statistics index 7ad5ce76..bbd670ee 100755 --- a/target/executable/stats/generate_pool_statistics/generate_pool_statistics +++ b/target/executable/stats/generate_pool_statistics/generate_pool_statistics @@ -483,9 +483,9 @@ RUN pip install --upgrade pip && \ LABEL org.opencontainers.image.authors="Dries Schaumont, Marijke Van Moerbeke" LABEL org.opencontainers.image.description="Companion container for running component stats generate_pool_statistics" -LABEL org.opencontainers.image.created="2025-01-10T13:27:25Z" +LABEL org.opencontainers.image.created="2025-01-10T15:10:03Z" LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq" -LABEL org.opencontainers.image.revision="9b6d4705446702e857a3f70a78629beae1f89beb" +LABEL org.opencontainers.image.revision="1ec0b962068a41323a79fd96b47094d8fbbf6914" LABEL org.opencontainers.image.version="update_r" VIASHDOCKER diff --git a/target/executable/stats/generate_well_statistics/.config.vsh.yaml b/target/executable/stats/generate_well_statistics/.config.vsh.yaml index ad976684..743161a2 100644 --- a/target/executable/stats/generate_well_statistics/.config.vsh.yaml +++ b/target/executable/stats/generate_well_statistics/.config.vsh.yaml @@ -262,8 +262,8 @@ build_info: output: "target/executable/stats/generate_well_statistics" executable: "target/executable/stats/generate_well_statistics/generate_well_statistics" viash_version: "0.9.0" - git_commit: "9b6d4705446702e857a3f70a78629beae1f89beb" - git_remote: "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + git_commit: "1ec0b962068a41323a79fd96b47094d8fbbf6914" + git_remote: "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" package_config: name: "htrnaseq" version: "update_r" diff --git a/target/executable/stats/generate_well_statistics/generate_well_statistics b/target/executable/stats/generate_well_statistics/generate_well_statistics index 58b1e541..88a64903 100755 --- a/target/executable/stats/generate_well_statistics/generate_well_statistics +++ b/target/executable/stats/generate_well_statistics/generate_well_statistics @@ -520,9 +520,9 @@ RUN pip install --upgrade pip && \ LABEL org.opencontainers.image.authors="Dries Schaumont, Marijke Van Moerbeke" LABEL org.opencontainers.image.description="Companion container for running component stats generate_well_statistics" -LABEL org.opencontainers.image.created="2025-01-10T13:27:26Z" +LABEL org.opencontainers.image.created="2025-01-10T15:10:04Z" LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq" -LABEL org.opencontainers.image.revision="9b6d4705446702e857a3f70a78629beae1f89beb" +LABEL org.opencontainers.image.revision="1ec0b962068a41323a79fd96b47094d8fbbf6914" LABEL org.opencontainers.image.version="update_r" VIASHDOCKER diff --git a/target/nextflow/eset/create_eset/.config.vsh.yaml b/target/nextflow/eset/create_eset/.config.vsh.yaml index 8d470c50..cf372080 100644 --- a/target/nextflow/eset/create_eset/.config.vsh.yaml +++ b/target/nextflow/eset/create_eset/.config.vsh.yaml @@ -198,8 +198,8 @@ build_info: output: "target/nextflow/eset/create_eset" executable: "target/nextflow/eset/create_eset/main.nf" viash_version: "0.9.0" - git_commit: "9b6d4705446702e857a3f70a78629beae1f89beb" - git_remote: "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + git_commit: "1ec0b962068a41323a79fd96b47094d8fbbf6914" + git_remote: "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" package_config: name: "htrnaseq" version: "update_r" diff --git a/target/nextflow/eset/create_eset/main.nf b/target/nextflow/eset/create_eset/main.nf index 90bb65c3..db929956 100644 --- a/target/nextflow/eset/create_eset/main.nf +++ b/target/nextflow/eset/create_eset/main.nf @@ -3072,8 +3072,8 @@ meta = [ "engine" : "docker|native", "output" : "target/nextflow/eset/create_eset", "viash_version" : "0.9.0", - "git_commit" : "9b6d4705446702e857a3f70a78629beae1f89beb", - "git_remote" : "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + "git_commit" : "1ec0b962068a41323a79fd96b47094d8fbbf6914", + "git_remote" : "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" }, "package_config" : { "name" : "htrnaseq", diff --git a/target/nextflow/eset/create_fdata/.config.vsh.yaml b/target/nextflow/eset/create_fdata/.config.vsh.yaml index 84ea5e62..5f6c17b6 100644 --- a/target/nextflow/eset/create_fdata/.config.vsh.yaml +++ b/target/nextflow/eset/create_fdata/.config.vsh.yaml @@ -177,8 +177,8 @@ build_info: output: "target/nextflow/eset/create_fdata" executable: "target/nextflow/eset/create_fdata/main.nf" viash_version: "0.9.0" - git_commit: "9b6d4705446702e857a3f70a78629beae1f89beb" - git_remote: "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + git_commit: "1ec0b962068a41323a79fd96b47094d8fbbf6914" + git_remote: "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" package_config: name: "htrnaseq" version: "update_r" diff --git a/target/nextflow/eset/create_fdata/main.nf b/target/nextflow/eset/create_fdata/main.nf index 80693df9..db06bd20 100644 --- a/target/nextflow/eset/create_fdata/main.nf +++ b/target/nextflow/eset/create_fdata/main.nf @@ -3044,8 +3044,8 @@ meta = [ "engine" : "docker|native", "output" : "target/nextflow/eset/create_fdata", "viash_version" : "0.9.0", - "git_commit" : "9b6d4705446702e857a3f70a78629beae1f89beb", - "git_remote" : "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + "git_commit" : "1ec0b962068a41323a79fd96b47094d8fbbf6914", + "git_remote" : "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" }, "package_config" : { "name" : "htrnaseq", diff --git a/target/nextflow/eset/create_pdata/.config.vsh.yaml b/target/nextflow/eset/create_pdata/.config.vsh.yaml index 9b5198d6..a1a15ea6 100644 --- a/target/nextflow/eset/create_pdata/.config.vsh.yaml +++ b/target/nextflow/eset/create_pdata/.config.vsh.yaml @@ -191,8 +191,8 @@ build_info: output: "target/nextflow/eset/create_pdata" executable: "target/nextflow/eset/create_pdata/main.nf" viash_version: "0.9.0" - git_commit: "9b6d4705446702e857a3f70a78629beae1f89beb" - git_remote: "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + git_commit: "1ec0b962068a41323a79fd96b47094d8fbbf6914" + git_remote: "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" package_config: name: "htrnaseq" version: "update_r" diff --git a/target/nextflow/eset/create_pdata/main.nf b/target/nextflow/eset/create_pdata/main.nf index e0d1fe5e..4e72ae0f 100644 --- a/target/nextflow/eset/create_pdata/main.nf +++ b/target/nextflow/eset/create_pdata/main.nf @@ -3058,8 +3058,8 @@ meta = [ "engine" : "docker|native", "output" : "target/nextflow/eset/create_pdata", "viash_version" : "0.9.0", - "git_commit" : "9b6d4705446702e857a3f70a78629beae1f89beb", - "git_remote" : "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + "git_commit" : "1ec0b962068a41323a79fd96b47094d8fbbf6914", + "git_remote" : "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" }, "package_config" : { "name" : "htrnaseq", diff --git a/target/nextflow/integration_test_components/htrnaseq/check_eset/.config.vsh.yaml b/target/nextflow/integration_test_components/htrnaseq/check_eset/.config.vsh.yaml index 7f2f21b9..1be238ac 100644 --- a/target/nextflow/integration_test_components/htrnaseq/check_eset/.config.vsh.yaml +++ b/target/nextflow/integration_test_components/htrnaseq/check_eset/.config.vsh.yaml @@ -148,8 +148,8 @@ build_info: output: "target/nextflow/integration_test_components/htrnaseq/check_eset" executable: "target/nextflow/integration_test_components/htrnaseq/check_eset/main.nf" viash_version: "0.9.0" - git_commit: "9b6d4705446702e857a3f70a78629beae1f89beb" - git_remote: "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + git_commit: "1ec0b962068a41323a79fd96b47094d8fbbf6914" + git_remote: "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" package_config: name: "htrnaseq" version: "update_r" diff --git a/target/nextflow/integration_test_components/htrnaseq/check_eset/main.nf b/target/nextflow/integration_test_components/htrnaseq/check_eset/main.nf index c9639cea..677abd4d 100644 --- a/target/nextflow/integration_test_components/htrnaseq/check_eset/main.nf +++ b/target/nextflow/integration_test_components/htrnaseq/check_eset/main.nf @@ -2997,8 +2997,8 @@ meta = [ "engine" : "docker|native", "output" : "target/nextflow/integration_test_components/htrnaseq/check_eset", "viash_version" : "0.9.0", - "git_commit" : "9b6d4705446702e857a3f70a78629beae1f89beb", - "git_remote" : "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + "git_commit" : "1ec0b962068a41323a79fd96b47094d8fbbf6914", + "git_remote" : "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" }, "package_config" : { "name" : "htrnaseq", diff --git a/target/nextflow/integration_test_components/well_demultiplexing/check_cutadapt_output/.config.vsh.yaml b/target/nextflow/integration_test_components/well_demultiplexing/check_cutadapt_output/.config.vsh.yaml index e52889b8..5dcf6199 100644 --- a/target/nextflow/integration_test_components/well_demultiplexing/check_cutadapt_output/.config.vsh.yaml +++ b/target/nextflow/integration_test_components/well_demultiplexing/check_cutadapt_output/.config.vsh.yaml @@ -158,8 +158,8 @@ build_info: output: "target/nextflow/integration_test_components/well_demultiplexing/check_cutadapt_output" executable: "target/nextflow/integration_test_components/well_demultiplexing/check_cutadapt_output/main.nf" viash_version: "0.9.0" - git_commit: "9b6d4705446702e857a3f70a78629beae1f89beb" - git_remote: "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + git_commit: "1ec0b962068a41323a79fd96b47094d8fbbf6914" + git_remote: "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" package_config: name: "htrnaseq" version: "update_r" diff --git a/target/nextflow/integration_test_components/well_demultiplexing/check_cutadapt_output/main.nf b/target/nextflow/integration_test_components/well_demultiplexing/check_cutadapt_output/main.nf index e539d14e..c660bc40 100644 --- a/target/nextflow/integration_test_components/well_demultiplexing/check_cutadapt_output/main.nf +++ b/target/nextflow/integration_test_components/well_demultiplexing/check_cutadapt_output/main.nf @@ -3009,8 +3009,8 @@ meta = [ "engine" : "docker|native", "output" : "target/nextflow/integration_test_components/well_demultiplexing/check_cutadapt_output", "viash_version" : "0.9.0", - "git_commit" : "9b6d4705446702e857a3f70a78629beae1f89beb", - "git_remote" : "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + "git_commit" : "1ec0b962068a41323a79fd96b47094d8fbbf6914", + "git_remote" : "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" }, "package_config" : { "name" : "htrnaseq", diff --git a/target/nextflow/parallel_map/.config.vsh.yaml b/target/nextflow/parallel_map/.config.vsh.yaml index 0101a3ff..2c4434fb 100644 --- a/target/nextflow/parallel_map/.config.vsh.yaml +++ b/target/nextflow/parallel_map/.config.vsh.yaml @@ -264,8 +264,8 @@ build_info: output: "target/nextflow/parallel_map" executable: "target/nextflow/parallel_map/main.nf" viash_version: "0.9.0" - git_commit: "9b6d4705446702e857a3f70a78629beae1f89beb" - git_remote: "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + git_commit: "1ec0b962068a41323a79fd96b47094d8fbbf6914" + git_remote: "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" package_config: name: "htrnaseq" version: "update_r" diff --git a/target/nextflow/parallel_map/main.nf b/target/nextflow/parallel_map/main.nf index 3e4c7941..c4dd970b 100644 --- a/target/nextflow/parallel_map/main.nf +++ b/target/nextflow/parallel_map/main.nf @@ -3148,8 +3148,8 @@ meta = [ "engine" : "docker|native", "output" : "target/nextflow/parallel_map", "viash_version" : "0.9.0", - "git_commit" : "9b6d4705446702e857a3f70a78629beae1f89beb", - "git_remote" : "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + "git_commit" : "1ec0b962068a41323a79fd96b47094d8fbbf6914", + "git_remote" : "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" }, "package_config" : { "name" : "htrnaseq", diff --git a/target/nextflow/report/create_report/.config.vsh.yaml b/target/nextflow/report/create_report/.config.vsh.yaml index 9a0e816a..474fe87f 100644 --- a/target/nextflow/report/create_report/.config.vsh.yaml +++ b/target/nextflow/report/create_report/.config.vsh.yaml @@ -201,8 +201,8 @@ build_info: output: "target/nextflow/report/create_report" executable: "target/nextflow/report/create_report/main.nf" viash_version: "0.9.0" - git_commit: "9b6d4705446702e857a3f70a78629beae1f89beb" - git_remote: "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + git_commit: "1ec0b962068a41323a79fd96b47094d8fbbf6914" + git_remote: "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" package_config: name: "htrnaseq" version: "update_r" diff --git a/target/nextflow/report/create_report/main.nf b/target/nextflow/report/create_report/main.nf index 485cdc92..e72b86d9 100644 --- a/target/nextflow/report/create_report/main.nf +++ b/target/nextflow/report/create_report/main.nf @@ -3077,8 +3077,8 @@ meta = [ "engine" : "docker|native", "output" : "target/nextflow/report/create_report", "viash_version" : "0.9.0", - "git_commit" : "9b6d4705446702e857a3f70a78629beae1f89beb", - "git_remote" : "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + "git_commit" : "1ec0b962068a41323a79fd96b47094d8fbbf6914", + "git_remote" : "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" }, "package_config" : { "name" : "htrnaseq", diff --git a/target/nextflow/stats/combine_star_logs/.config.vsh.yaml b/target/nextflow/stats/combine_star_logs/.config.vsh.yaml index 02c28977..5dfcec9f 100644 --- a/target/nextflow/stats/combine_star_logs/.config.vsh.yaml +++ b/target/nextflow/stats/combine_star_logs/.config.vsh.yaml @@ -198,8 +198,8 @@ build_info: output: "target/nextflow/stats/combine_star_logs" executable: "target/nextflow/stats/combine_star_logs/main.nf" viash_version: "0.9.0" - git_commit: "9b6d4705446702e857a3f70a78629beae1f89beb" - git_remote: "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + git_commit: "1ec0b962068a41323a79fd96b47094d8fbbf6914" + git_remote: "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" package_config: name: "htrnaseq" version: "update_r" diff --git a/target/nextflow/stats/combine_star_logs/main.nf b/target/nextflow/stats/combine_star_logs/main.nf index 57d0f28c..17d620e4 100644 --- a/target/nextflow/stats/combine_star_logs/main.nf +++ b/target/nextflow/stats/combine_star_logs/main.nf @@ -3060,8 +3060,8 @@ meta = [ "engine" : "docker|native", "output" : "target/nextflow/stats/combine_star_logs", "viash_version" : "0.9.0", - "git_commit" : "9b6d4705446702e857a3f70a78629beae1f89beb", - "git_remote" : "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + "git_commit" : "1ec0b962068a41323a79fd96b47094d8fbbf6914", + "git_remote" : "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" }, "package_config" : { "name" : "htrnaseq", diff --git a/target/nextflow/stats/generate_pool_statistics/.config.vsh.yaml b/target/nextflow/stats/generate_pool_statistics/.config.vsh.yaml index e364cfa4..52cac99b 100644 --- a/target/nextflow/stats/generate_pool_statistics/.config.vsh.yaml +++ b/target/nextflow/stats/generate_pool_statistics/.config.vsh.yaml @@ -182,8 +182,8 @@ build_info: output: "target/nextflow/stats/generate_pool_statistics" executable: "target/nextflow/stats/generate_pool_statistics/main.nf" viash_version: "0.9.0" - git_commit: "9b6d4705446702e857a3f70a78629beae1f89beb" - git_remote: "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + git_commit: "1ec0b962068a41323a79fd96b47094d8fbbf6914" + git_remote: "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" package_config: name: "htrnaseq" version: "update_r" diff --git a/target/nextflow/stats/generate_pool_statistics/main.nf b/target/nextflow/stats/generate_pool_statistics/main.nf index 1cc31ebb..cac4335d 100644 --- a/target/nextflow/stats/generate_pool_statistics/main.nf +++ b/target/nextflow/stats/generate_pool_statistics/main.nf @@ -3044,8 +3044,8 @@ meta = [ "engine" : "docker|native", "output" : "target/nextflow/stats/generate_pool_statistics", "viash_version" : "0.9.0", - "git_commit" : "9b6d4705446702e857a3f70a78629beae1f89beb", - "git_remote" : "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + "git_commit" : "1ec0b962068a41323a79fd96b47094d8fbbf6914", + "git_remote" : "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" }, "package_config" : { "name" : "htrnaseq", diff --git a/target/nextflow/stats/generate_well_statistics/.config.vsh.yaml b/target/nextflow/stats/generate_well_statistics/.config.vsh.yaml index 950c0963..aabb946e 100644 --- a/target/nextflow/stats/generate_well_statistics/.config.vsh.yaml +++ b/target/nextflow/stats/generate_well_statistics/.config.vsh.yaml @@ -262,8 +262,8 @@ build_info: output: "target/nextflow/stats/generate_well_statistics" executable: "target/nextflow/stats/generate_well_statistics/main.nf" viash_version: "0.9.0" - git_commit: "9b6d4705446702e857a3f70a78629beae1f89beb" - git_remote: "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + git_commit: "1ec0b962068a41323a79fd96b47094d8fbbf6914" + git_remote: "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" package_config: name: "htrnaseq" version: "update_r" diff --git a/target/nextflow/stats/generate_well_statistics/main.nf b/target/nextflow/stats/generate_well_statistics/main.nf index 344bebc8..5de18de7 100644 --- a/target/nextflow/stats/generate_well_statistics/main.nf +++ b/target/nextflow/stats/generate_well_statistics/main.nf @@ -3135,8 +3135,8 @@ meta = [ "engine" : "docker|native", "output" : "target/nextflow/stats/generate_well_statistics", "viash_version" : "0.9.0", - "git_commit" : "9b6d4705446702e857a3f70a78629beae1f89beb", - "git_remote" : "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + "git_commit" : "1ec0b962068a41323a79fd96b47094d8fbbf6914", + "git_remote" : "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" }, "package_config" : { "name" : "htrnaseq", diff --git a/target/nextflow/workflows/htrnaseq/.config.vsh.yaml b/target/nextflow/workflows/htrnaseq/.config.vsh.yaml index 44f45b6d..a5aedbb6 100644 --- a/target/nextflow/workflows/htrnaseq/.config.vsh.yaml +++ b/target/nextflow/workflows/htrnaseq/.config.vsh.yaml @@ -308,8 +308,8 @@ build_info: output: "target/nextflow/workflows/htrnaseq" executable: "target/nextflow/workflows/htrnaseq/main.nf" viash_version: "0.9.0" - git_commit: "9b6d4705446702e857a3f70a78629beae1f89beb" - git_remote: "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + git_commit: "1ec0b962068a41323a79fd96b47094d8fbbf6914" + git_remote: "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" dependencies: - "target/nextflow/stats/combine_star_logs" - "target/nextflow/stats/generate_pool_statistics" diff --git a/target/nextflow/workflows/htrnaseq/main.nf b/target/nextflow/workflows/htrnaseq/main.nf index 165564ee..b6a7d921 100644 --- a/target/nextflow/workflows/htrnaseq/main.nf +++ b/target/nextflow/workflows/htrnaseq/main.nf @@ -3210,8 +3210,8 @@ meta = [ "engine" : "native|native", "output" : "target/nextflow/workflows/htrnaseq", "viash_version" : "0.9.0", - "git_commit" : "9b6d4705446702e857a3f70a78629beae1f89beb", - "git_remote" : "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + "git_commit" : "1ec0b962068a41323a79fd96b47094d8fbbf6914", + "git_remote" : "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" }, "package_config" : { "name" : "htrnaseq", diff --git a/target/nextflow/workflows/parallel_map_wf/.config.vsh.yaml b/target/nextflow/workflows/parallel_map_wf/.config.vsh.yaml index c6f6cbba..3c4c9f50 100644 --- a/target/nextflow/workflows/parallel_map_wf/.config.vsh.yaml +++ b/target/nextflow/workflows/parallel_map_wf/.config.vsh.yaml @@ -175,8 +175,8 @@ build_info: output: "target/nextflow/workflows/parallel_map_wf" executable: "target/nextflow/workflows/parallel_map_wf/main.nf" viash_version: "0.9.0" - git_commit: "9b6d4705446702e857a3f70a78629beae1f89beb" - git_remote: "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + git_commit: "1ec0b962068a41323a79fd96b47094d8fbbf6914" + git_remote: "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" dependencies: - "target/nextflow/parallel_map" - "target/nextflow/workflows/utils/groupWells" diff --git a/target/nextflow/workflows/parallel_map_wf/main.nf b/target/nextflow/workflows/parallel_map_wf/main.nf index da1115ba..d744484a 100644 --- a/target/nextflow/workflows/parallel_map_wf/main.nf +++ b/target/nextflow/workflows/parallel_map_wf/main.nf @@ -3028,8 +3028,8 @@ meta = [ "engine" : "native|native", "output" : "target/nextflow/workflows/parallel_map_wf", "viash_version" : "0.9.0", - "git_commit" : "9b6d4705446702e857a3f70a78629beae1f89beb", - "git_remote" : "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + "git_commit" : "1ec0b962068a41323a79fd96b47094d8fbbf6914", + "git_remote" : "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" }, "package_config" : { "name" : "htrnaseq", diff --git a/target/nextflow/workflows/utils/groupWells/.config.vsh.yaml b/target/nextflow/workflows/utils/groupWells/.config.vsh.yaml index 7647594a..436ee9c8 100644 --- a/target/nextflow/workflows/utils/groupWells/.config.vsh.yaml +++ b/target/nextflow/workflows/utils/groupWells/.config.vsh.yaml @@ -185,8 +185,8 @@ build_info: output: "target/nextflow/workflows/utils/groupWells" executable: "target/nextflow/workflows/utils/groupWells/main.nf" viash_version: "0.9.0" - git_commit: "9b6d4705446702e857a3f70a78629beae1f89beb" - git_remote: "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + git_commit: "1ec0b962068a41323a79fd96b47094d8fbbf6914" + git_remote: "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" package_config: name: "htrnaseq" version: "update_r" diff --git a/target/nextflow/workflows/utils/groupWells/main.nf b/target/nextflow/workflows/utils/groupWells/main.nf index 9c5bbeed..402c7300 100644 --- a/target/nextflow/workflows/utils/groupWells/main.nf +++ b/target/nextflow/workflows/utils/groupWells/main.nf @@ -3039,8 +3039,8 @@ meta = [ "engine" : "native", "output" : "target/nextflow/workflows/utils/groupWells", "viash_version" : "0.9.0", - "git_commit" : "9b6d4705446702e857a3f70a78629beae1f89beb", - "git_remote" : "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + "git_commit" : "1ec0b962068a41323a79fd96b47094d8fbbf6914", + "git_remote" : "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" }, "package_config" : { "name" : "htrnaseq", diff --git a/target/nextflow/workflows/well_demultiplex/.config.vsh.yaml b/target/nextflow/workflows/well_demultiplex/.config.vsh.yaml index 2703ee42..3b1536db 100644 --- a/target/nextflow/workflows/well_demultiplex/.config.vsh.yaml +++ b/target/nextflow/workflows/well_demultiplex/.config.vsh.yaml @@ -255,8 +255,8 @@ build_info: output: "target/nextflow/workflows/well_demultiplex" executable: "target/nextflow/workflows/well_demultiplex/main.nf" viash_version: "0.9.0" - git_commit: "9b6d4705446702e857a3f70a78629beae1f89beb" - git_remote: "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + git_commit: "1ec0b962068a41323a79fd96b47094d8fbbf6914" + git_remote: "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" dependencies: - "target/dependencies/vsh/vsh/biobox/v0.3.0/nextflow/cutadapt" - "target/dependencies/vsh/vsh/craftbox/v0.1.0/nextflow/concat_text" diff --git a/target/nextflow/workflows/well_demultiplex/main.nf b/target/nextflow/workflows/well_demultiplex/main.nf index 6ee75686..2dc72ac2 100644 --- a/target/nextflow/workflows/well_demultiplex/main.nf +++ b/target/nextflow/workflows/well_demultiplex/main.nf @@ -3134,8 +3134,8 @@ meta = [ "engine" : "native|native", "output" : "target/nextflow/workflows/well_demultiplex", "viash_version" : "0.9.0", - "git_commit" : "9b6d4705446702e857a3f70a78629beae1f89beb", - "git_remote" : "https://x-access-token:ghs_xBE6ZN8xJhBHYYs3DDpSX9H3KDAmXX1vZQvY@github.com/viash-hub/htrnaseq" + "git_commit" : "1ec0b962068a41323a79fd96b47094d8fbbf6914", + "git_remote" : "https://x-access-token:ghs_SaYCQ0uYvqLIVXUBCVNZPcP9pTStxd0Bbljy@github.com/viash-hub/htrnaseq" }, "package_config" : { "name" : "htrnaseq",