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Build branch main with version main (a3b7ae3)

Browse Source 
Build pipeline: viash-hub.htrnaseq.main-fmznz

Source commit: a3b7ae3f31

Source message: update biobox and craftbox versions (#60)

* update biobox and craftbox versions

* update changelog
This commit is contained in:
CI
2025-07-25 08:53:08 +00:00
parent 50ef7470fa
commit ef4cabdcee
94 changed files with 6367 additions and 2660 deletions
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4
target/executable/eset/create_eset/.config.vsh.yaml
View File

@@ -203,9 +203,9 @@ build_info:
output: "target/executable/eset/create_eset"
executable: "target/executable/eset/create_eset/create_eset"
viash_version: "0.9.4"
git_commit: "7e47ecc5dbf74e3bd5c35783f78bb948f6616d80"
git_commit: "a3b7ae3f31ff5eeee305a2cca1ce09ebe1cd8957"
git_remote: "https://github.com/viash-hub/htrnaseq"
git_tag: "v0.7.2-5-g7e47ecc"
git_tag: "v0.7.2-6-ga3b7ae3"
package_config:
name: "htrnaseq"
version: "main"

4
target/executable/eset/create_eset/create_eset
View File

@@ -456,9 +456,9 @@ RUN Rscript -e 'options(warn = 2); if (!requireNamespace("remotes", quietly = TR
LABEL org.opencontainers.image.authors="Dries Schaumont, Marijke Van Moerbeke"
LABEL org.opencontainers.image.description="Companion container for running component eset create_eset"
LABEL org.opencontainers.image.created="2025-05-16T09:12:19Z"
LABEL org.opencontainers.image.created="2025-07-25T08:01:22Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq"
LABEL org.opencontainers.image.revision="7e47ecc5dbf74e3bd5c35783f78bb948f6616d80"
LABEL org.opencontainers.image.revision="a3b7ae3f31ff5eeee305a2cca1ce09ebe1cd8957"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER

4
target/executable/eset/create_fdata/.config.vsh.yaml
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@@ -180,9 +180,9 @@ build_info:
output: "target/executable/eset/create_fdata"
executable: "target/executable/eset/create_fdata/create_fdata"
viash_version: "0.9.4"
git_commit: "7e47ecc5dbf74e3bd5c35783f78bb948f6616d80"
git_commit: "a3b7ae3f31ff5eeee305a2cca1ce09ebe1cd8957"
git_remote: "https://github.com/viash-hub/htrnaseq"
git_tag: "v0.7.2-5-g7e47ecc"
git_tag: "v0.7.2-6-ga3b7ae3"
package_config:
name: "htrnaseq"
version: "main"

4
target/executable/eset/create_fdata/create_fdata
View File

@@ -458,9 +458,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries Schaumont, Marijke Van Moerbeke"
LABEL org.opencontainers.image.description="Companion container for running component eset create_fdata"
LABEL org.opencontainers.image.created="2025-05-16T09:12:20Z"
LABEL org.opencontainers.image.created="2025-07-25T08:01:21Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq"
LABEL org.opencontainers.image.revision="7e47ecc5dbf74e3bd5c35783f78bb948f6616d80"
LABEL org.opencontainers.image.revision="a3b7ae3f31ff5eeee305a2cca1ce09ebe1cd8957"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER

4
target/executable/eset/create_pdata/.config.vsh.yaml
View File

@@ -194,9 +194,9 @@ build_info:
output: "target/executable/eset/create_pdata"
executable: "target/executable/eset/create_pdata/create_pdata"
viash_version: "0.9.4"
git_commit: "7e47ecc5dbf74e3bd5c35783f78bb948f6616d80"
git_commit: "a3b7ae3f31ff5eeee305a2cca1ce09ebe1cd8957"
git_remote: "https://github.com/viash-hub/htrnaseq"
git_tag: "v0.7.2-5-g7e47ecc"
git_tag: "v0.7.2-6-ga3b7ae3"
package_config:
name: "htrnaseq"
version: "main"

4
target/executable/eset/create_pdata/create_pdata
View File

@@ -458,9 +458,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries Schaumont, Marijke Van Moerbeke"
LABEL org.opencontainers.image.description="Companion container for running component eset create_pdata"
LABEL org.opencontainers.image.created="2025-05-16T09:12:19Z"
LABEL org.opencontainers.image.created="2025-07-25T08:01:22Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq"
LABEL org.opencontainers.image.revision="7e47ecc5dbf74e3bd5c35783f78bb948f6616d80"
LABEL org.opencontainers.image.revision="a3b7ae3f31ff5eeee305a2cca1ce09ebe1cd8957"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER

4
target/executable/integration_test_components/htrnaseq/check_eset/.config.vsh.yaml
View File

@@ -152,9 +152,9 @@ build_info:
output: "target/executable/integration_test_components/htrnaseq/check_eset"
executable: "target/executable/integration_test_components/htrnaseq/check_eset/check_eset"
viash_version: "0.9.4"
git_commit: "7e47ecc5dbf74e3bd5c35783f78bb948f6616d80"
git_commit: "a3b7ae3f31ff5eeee305a2cca1ce09ebe1cd8957"
git_remote: "https://github.com/viash-hub/htrnaseq"
git_tag: "v0.7.2-5-g7e47ecc"
git_tag: "v0.7.2-6-ga3b7ae3"
package_config:
name: "htrnaseq"
version: "main"

4
target/executable/integration_test_components/htrnaseq/check_eset/check_eset
View File

@@ -455,9 +455,9 @@ RUN Rscript -e 'options(warn = 2); if (!requireNamespace("remotes", quietly = TR
LABEL org.opencontainers.image.authors="Dries Schaumont"
LABEL org.opencontainers.image.description="Companion container for running component integration_test_components/htrnaseq check_eset"
LABEL org.opencontainers.image.created="2025-05-16T09:12:18Z"
LABEL org.opencontainers.image.created="2025-07-25T08:01:22Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq"
LABEL org.opencontainers.image.revision="7e47ecc5dbf74e3bd5c35783f78bb948f6616d80"
LABEL org.opencontainers.image.revision="a3b7ae3f31ff5eeee305a2cca1ce09ebe1cd8957"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER

4
target/executable/integration_test_components/well_demultiplexing/check_cutadapt_output/.config.vsh.yaml
View File

@@ -161,9 +161,9 @@ build_info:
output: "target/executable/integration_test_components/well_demultiplexing/check_cutadapt_output"
executable: "target/executable/integration_test_components/well_demultiplexing/check_cutadapt_output/check_cutadapt_output"
viash_version: "0.9.4"
git_commit: "7e47ecc5dbf74e3bd5c35783f78bb948f6616d80"
git_commit: "a3b7ae3f31ff5eeee305a2cca1ce09ebe1cd8957"
git_remote: "https://github.com/viash-hub/htrnaseq"
git_tag: "v0.7.2-5-g7e47ecc"
git_tag: "v0.7.2-6-ga3b7ae3"
package_config:
name: "htrnaseq"
version: "main"

4
target/executable/integration_test_components/well_demultiplexing/check_cutadapt_output/check_cutadapt_output
View File

@@ -457,9 +457,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries Schaumont"
LABEL org.opencontainers.image.description="Companion container for running component integration_test_components/well_demultiplexing check_cutadapt_output"
LABEL org.opencontainers.image.created="2025-05-16T09:12:19Z"
LABEL org.opencontainers.image.created="2025-07-25T08:01:22Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq"
LABEL org.opencontainers.image.revision="7e47ecc5dbf74e3bd5c35783f78bb948f6616d80"
LABEL org.opencontainers.image.revision="a3b7ae3f31ff5eeee305a2cca1ce09ebe1cd8957"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER

4
target/executable/io/publish_fastqs/.config.vsh.yaml
View File

@@ -136,9 +136,9 @@ build_info:
output: "target/executable/io/publish_fastqs"
executable: "target/executable/io/publish_fastqs/publish_fastqs"
viash_version: "0.9.4"
git_commit: "7e47ecc5dbf74e3bd5c35783f78bb948f6616d80"
git_commit: "a3b7ae3f31ff5eeee305a2cca1ce09ebe1cd8957"
git_remote: "https://github.com/viash-hub/htrnaseq"
git_tag: "v0.7.2-5-g7e47ecc"
git_tag: "v0.7.2-6-ga3b7ae3"
package_config:
name: "htrnaseq"
version: "main"

4
target/executable/io/publish_fastqs/publish_fastqs
View File

@@ -450,9 +450,9 @@ RUN apt-get update && \
rm -rf /var/lib/apt/lists/*
LABEL org.opencontainers.image.description="Companion container for running component io publish_fastqs"
LABEL org.opencontainers.image.created="2025-05-16T09:12:18Z"
LABEL org.opencontainers.image.created="2025-07-25T08:01:22Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq"
LABEL org.opencontainers.image.revision="7e47ecc5dbf74e3bd5c35783f78bb948f6616d80"
LABEL org.opencontainers.image.revision="a3b7ae3f31ff5eeee305a2cca1ce09ebe1cd8957"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER

4
target/executable/io/publish_results/.config.vsh.yaml
View File

@@ -199,9 +199,9 @@ build_info:
output: "target/executable/io/publish_results"
executable: "target/executable/io/publish_results/publish_results"
viash_version: "0.9.4"
git_commit: "7e47ecc5dbf74e3bd5c35783f78bb948f6616d80"
git_commit: "a3b7ae3f31ff5eeee305a2cca1ce09ebe1cd8957"
git_remote: "https://github.com/viash-hub/htrnaseq"
git_tag: "v0.7.2-5-g7e47ecc"
git_tag: "v0.7.2-6-ga3b7ae3"
package_config:
name: "htrnaseq"
version: "main"

4
target/executable/io/publish_results/publish_results
View File

@@ -450,9 +450,9 @@ RUN apt-get update && \
rm -rf /var/lib/apt/lists/*
LABEL org.opencontainers.image.description="Companion container for running component io publish_results"
LABEL org.opencontainers.image.created="2025-05-16T09:12:18Z"
LABEL org.opencontainers.image.created="2025-07-25T08:01:21Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq"
LABEL org.opencontainers.image.revision="7e47ecc5dbf74e3bd5c35783f78bb948f6616d80"
LABEL org.opencontainers.image.revision="a3b7ae3f31ff5eeee305a2cca1ce09ebe1cd8957"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER

4
target/executable/parallel_map/.config.vsh.yaml
View File

@@ -282,9 +282,9 @@ build_info:
output: "target/executable/parallel_map"
executable: "target/executable/parallel_map/parallel_map"
viash_version: "0.9.4"
git_commit: "7e47ecc5dbf74e3bd5c35783f78bb948f6616d80"
git_commit: "a3b7ae3f31ff5eeee305a2cca1ce09ebe1cd8957"
git_remote: "https://github.com/viash-hub/htrnaseq"
git_tag: "v0.7.2-5-g7e47ecc"
git_tag: "v0.7.2-6-ga3b7ae3"
package_config:
name: "htrnaseq"
version: "main"

4
target/executable/parallel_map/parallel_map
View File

@@ -461,9 +461,9 @@ ENV STAR_BINARY=STAR
COPY STAR /usr/local/bin/$STAR_BINARY
LABEL org.opencontainers.image.authors="Dries Schaumont, Toni Verbeiren"
LABEL org.opencontainers.image.description="Companion container for running component parallel_map"
LABEL org.opencontainers.image.created="2025-05-16T09:12:17Z"
LABEL org.opencontainers.image.created="2025-07-25T08:01:23Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq"
LABEL org.opencontainers.image.revision="7e47ecc5dbf74e3bd5c35783f78bb948f6616d80"
LABEL org.opencontainers.image.revision="a3b7ae3f31ff5eeee305a2cca1ce09ebe1cd8957"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER

4
target/executable/report/create_report/.config.vsh.yaml
View File

@@ -212,9 +212,9 @@ build_info:
output: "target/executable/report/create_report"
executable: "target/executable/report/create_report/create_report"
viash_version: "0.9.4"
git_commit: "7e47ecc5dbf74e3bd5c35783f78bb948f6616d80"
git_commit: "a3b7ae3f31ff5eeee305a2cca1ce09ebe1cd8957"
git_remote: "https://github.com/viash-hub/htrnaseq"
git_tag: "v0.7.2-5-g7e47ecc"
git_tag: "v0.7.2-6-ga3b7ae3"
package_config:
name: "htrnaseq"
version: "main"

4
target/executable/report/create_report/create_report
View File

@@ -465,9 +465,9 @@ RUN Rscript -e 'options(warn = 2); if (!requireNamespace("remotes", quietly = TR
LABEL org.opencontainers.image.authors="Dries Schaumont, Marijke Van Moerbeke"
LABEL org.opencontainers.image.description="Companion container for running component report create_report"
LABEL org.opencontainers.image.created="2025-05-16T09:12:17Z"
LABEL org.opencontainers.image.created="2025-07-25T08:01:21Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq"
LABEL org.opencontainers.image.revision="7e47ecc5dbf74e3bd5c35783f78bb948f6616d80"
LABEL org.opencontainers.image.revision="a3b7ae3f31ff5eeee305a2cca1ce09ebe1cd8957"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER

4
target/executable/stats/combine_star_logs/.config.vsh.yaml
View File

@@ -201,9 +201,9 @@ build_info:
output: "target/executable/stats/combine_star_logs"
executable: "target/executable/stats/combine_star_logs/combine_star_logs"
viash_version: "0.9.4"
git_commit: "7e47ecc5dbf74e3bd5c35783f78bb948f6616d80"
git_commit: "a3b7ae3f31ff5eeee305a2cca1ce09ebe1cd8957"
git_remote: "https://github.com/viash-hub/htrnaseq"
git_tag: "v0.7.2-5-g7e47ecc"
git_tag: "v0.7.2-6-ga3b7ae3"
package_config:
name: "htrnaseq"
version: "main"

4
target/executable/stats/combine_star_logs/combine_star_logs
View File

@@ -457,9 +457,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries Schaumont"
LABEL org.opencontainers.image.description="Companion container for running component stats combine_star_logs"
LABEL org.opencontainers.image.created="2025-05-16T09:12:19Z"
LABEL org.opencontainers.image.created="2025-07-25T08:01:21Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq"
LABEL org.opencontainers.image.revision="7e47ecc5dbf74e3bd5c35783f78bb948f6616d80"
LABEL org.opencontainers.image.revision="a3b7ae3f31ff5eeee305a2cca1ce09ebe1cd8957"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER

4
target/executable/stats/generate_pool_statistics/.config.vsh.yaml
View File

@@ -185,9 +185,9 @@ build_info:
output: "target/executable/stats/generate_pool_statistics"
executable: "target/executable/stats/generate_pool_statistics/generate_pool_statistics"
viash_version: "0.9.4"
git_commit: "7e47ecc5dbf74e3bd5c35783f78bb948f6616d80"
git_commit: "a3b7ae3f31ff5eeee305a2cca1ce09ebe1cd8957"
git_remote: "https://github.com/viash-hub/htrnaseq"
git_tag: "v0.7.2-5-g7e47ecc"
git_tag: "v0.7.2-6-ga3b7ae3"
package_config:
name: "htrnaseq"
version: "main"

4
target/executable/stats/generate_pool_statistics/generate_pool_statistics
View File

@@ -458,9 +458,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries Schaumont, Marijke Van Moerbeke"
LABEL org.opencontainers.image.description="Companion container for running component stats generate_pool_statistics"
LABEL org.opencontainers.image.created="2025-05-16T09:12:19Z"
LABEL org.opencontainers.image.created="2025-07-25T08:01:20Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq"
LABEL org.opencontainers.image.revision="7e47ecc5dbf74e3bd5c35783f78bb948f6616d80"
LABEL org.opencontainers.image.revision="a3b7ae3f31ff5eeee305a2cca1ce09ebe1cd8957"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER

4
target/executable/stats/generate_well_statistics/.config.vsh.yaml
View File

@@ -267,9 +267,9 @@ build_info:
output: "target/executable/stats/generate_well_statistics"
executable: "target/executable/stats/generate_well_statistics/generate_well_statistics"
viash_version: "0.9.4"
git_commit: "7e47ecc5dbf74e3bd5c35783f78bb948f6616d80"
git_commit: "a3b7ae3f31ff5eeee305a2cca1ce09ebe1cd8957"
git_remote: "https://github.com/viash-hub/htrnaseq"
git_tag: "v0.7.2-5-g7e47ecc"
git_tag: "v0.7.2-6-ga3b7ae3"
package_config:
name: "htrnaseq"
version: "main"

4
target/executable/stats/generate_well_statistics/generate_well_statistics
View File

@@ -461,9 +461,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries Schaumont, Marijke Van Moerbeke"
LABEL org.opencontainers.image.description="Companion container for running component stats generate_well_statistics"
LABEL org.opencontainers.image.created="2025-05-16T09:12:19Z"
LABEL org.opencontainers.image.created="2025-07-25T08:01:21Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq"
LABEL org.opencontainers.image.revision="7e47ecc5dbf74e3bd5c35783f78bb948f6616d80"
LABEL org.opencontainers.image.revision="a3b7ae3f31ff5eeee305a2cca1ce09ebe1cd8957"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER

4
target/executable/utils/save_params/.config.vsh.yaml
View File

@@ -148,9 +148,9 @@ build_info:
output: "target/executable/utils/save_params"
executable: "target/executable/utils/save_params/save_params"
viash_version: "0.9.4"
git_commit: "7e47ecc5dbf74e3bd5c35783f78bb948f6616d80"
git_commit: "a3b7ae3f31ff5eeee305a2cca1ce09ebe1cd8957"
git_remote: "https://github.com/viash-hub/htrnaseq"
git_tag: "v0.7.2-5-g7e47ecc"
git_tag: "v0.7.2-6-ga3b7ae3"
package_config:
name: "htrnaseq"
version: "main"

4
target/executable/utils/save_params/save_params
View File

@@ -453,9 +453,9 @@ RUN pip install --upgrade pip && \
pip install --upgrade --no-cache-dir "pyyaml"
LABEL org.opencontainers.image.description="Companion container for running component utils save_params"
LABEL org.opencontainers.image.created="2025-05-16T09:12:18Z"
LABEL org.opencontainers.image.created="2025-07-25T08:01:21Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/htrnaseq"
LABEL org.opencontainers.image.revision="7e47ecc5dbf74e3bd5c35783f78bb948f6616d80"
LABEL org.opencontainers.image.revision="a3b7ae3f31ff5eeee305a2cca1ce09ebe1cd8957"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER