Build branch main with version main (65dd41d)
Build pipeline: viash-hub.htrnaseq.main-vhms8
Source commit: 65dd41d8b1
Source message: Optimize spawning of processes
This commit is contained in:
@@ -6,23 +6,27 @@ argument_groups:
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arguments:
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- type: "file"
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name: "--input_r1"
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description: "R1"
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description: "Forward reads in FASTQ format. Multiple files can be provided which\
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\ will\nbe demultiplexed separately before joining the results for each individual\
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\ well.\n"
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info: null
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must_exist: true
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create_parent: true
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required: true
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direction: "input"
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multiple: false
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multiple: true
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multiple_sep: ";"
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- type: "file"
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name: "--input_r2"
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description: "R2"
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description: "Reverse reads in FASTQ format. Multiple files can be provided which\
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\ will\nbe demultiplexed separately before joining the results for each individual\
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\ well.\n"
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info: null
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must_exist: true
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create_parent: true
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required: true
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direction: "input"
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multiple: false
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multiple: true
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multiple_sep: ";"
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- type: "file"
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name: "--barcodesFasta"
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@@ -112,11 +116,20 @@ dependencies:
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repository:
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type: "vsh"
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repo: "biobox"
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tag: "main"
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- name: "concat_text"
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repository:
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type: "vsh"
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repo: "craftbox"
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tag: "v0.1.0"
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repositories:
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- type: "vsh"
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name: "bb"
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repo: "biobox"
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tag: "main"
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- type: "vsh"
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name: "cb"
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repo: "craftbox"
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tag: "v0.1.0"
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license: "MIT"
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links:
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@@ -196,17 +209,21 @@ build_info:
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engine: "native|native"
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output: "target/nextflow/workflows/well_demultiplex"
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executable: "target/nextflow/workflows/well_demultiplex/main.nf"
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viash_version: "0.9.0-RC7"
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git_commit: "cf9797232db1306bfd5696287928cababe317d99"
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git_remote: "https://x-access-token:ghs_KjB7pWu8DQM3iFulLu7RI06qnt5K8S1A0eaE@github.com/viash-hub/htrnaseq"
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viash_version: "0.9.0"
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git_commit: "65dd41d8b1b4a307735c72320c96c0880c75f17f"
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git_remote: "https://x-access-token:ghs_McZDF0yobnnHmOEb2Q4JaaB3pzr9mz1VbIOs@github.com/viash-hub/htrnaseq"
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dependencies:
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- "target/dependencies/vsh/vsh/biobox/v0.1.0/nextflow/cutadapt"
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- "target/dependencies/vsh/vsh/biobox/main/nextflow/cutadapt"
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- "target/dependencies/vsh/vsh/craftbox/v0.1.0/nextflow/concat_text"
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package_config:
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name: "htrnaseq"
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version: "main"
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description: "High-throughput pipeline [WIP]\n"
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info: null
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viash_version: "0.9.0-RC7"
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info:
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test_resources:
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- path: "gs://viash-hub-test-data/htrnaseq/v1/"
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dest: "resources_test"
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viash_version: "0.9.0"
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source: "src"
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target: "target"
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config_mods:
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