{ "$schema": "https://json-schema.org/draft/2020-12/schema", "title": "create_fdata", "description": "Create a fdata file\n", "type": "object", "$defs": { "arguments": { "title": "Arguments", "type": "object", "description": "No description", "properties": { "gtf": { "type": "string", "format": "path", "exists": true, "description": "Genome annotation file in GTF format.", "help_text": "Type: `file`, multiple: `False`, required, direction: `input`. " }, "output": { "type": "string", "format": "path", "description": "Tab-delimited text file containing information about the 'gene' or 'transcript'\nentries from the input GTF file", "help_text": "Type: `file`, multiple: `False`, default: `\"fData.$id.txt\"`, direction: `output`. ", "default": "fData.$id.txt" } } }, "nextflow input-output arguments": { "title": "Nextflow input-output arguments", "type": "object", "description": "Input/output parameters for Nextflow itself. Please note that both publishDir and publish_dir are supported but at least one has to be configured.", "properties": { "publish_dir": { "type": "string", "description": "Path to an output directory.", "help_text": "Type: `string`, multiple: `False`, required, example: `\"output/\"`. " } } } }, "allOf": [ { "$ref": "#/$defs/arguments" }, { "$ref": "#/$defs/nextflow input-output arguments" } ] }