Build pipeline: viash-hub.htrnaseq.main-fmznz
Source commit: a3b7ae3f31
Source message: update biobox and craftbox versions (#60)
* update biobox and craftbox versions
* update changelog
53 lines
1.6 KiB
JSON
53 lines
1.6 KiB
JSON
{
|
|
"$schema": "https://json-schema.org/draft/2020-12/schema",
|
|
"title": "create_report",
|
|
"description": "Create a basic QC report in HTML format based on a number of esets.\n",
|
|
"type": "object",
|
|
"$defs": {
|
|
"arguments": {
|
|
"title": "Arguments",
|
|
"type": "object",
|
|
"description": "No description",
|
|
"properties": {
|
|
"eset": {
|
|
"type": "array",
|
|
"items": {
|
|
"type": "string"
|
|
},
|
|
"format": "path",
|
|
"exists": true,
|
|
"description": "",
|
|
"help_text": "Type: `file`, multiple: `True`, required, direction: `input`. "
|
|
},
|
|
"output_report": {
|
|
"type": "string",
|
|
"format": "path",
|
|
"description": "",
|
|
"help_text": "Type: `file`, multiple: `False`, required, default: `\"$id.$key.output_report.html\"`, direction: `output`, example: `\"report.html\"`. ",
|
|
"default": "$id.$key.output_report.html"
|
|
}
|
|
}
|
|
},
|
|
"nextflow input-output arguments": {
|
|
"title": "Nextflow input-output arguments",
|
|
"type": "object",
|
|
"description": "Input/output parameters for Nextflow itself. Please note that both publishDir and publish_dir are supported but at least one has to be configured.",
|
|
"properties": {
|
|
"publish_dir": {
|
|
"type": "string",
|
|
"description": "Path to an output directory.",
|
|
"help_text": "Type: `string`, multiple: `False`, required, example: `\"output/\"`. "
|
|
}
|
|
}
|
|
}
|
|
},
|
|
"allOf": [
|
|
{
|
|
"$ref": "#/$defs/arguments"
|
|
},
|
|
{
|
|
"$ref": "#/$defs/nextflow input-output arguments"
|
|
}
|
|
]
|
|
}
|