CI
077772a26d
Build pipeline: viash-hub.htrnaseq.non-alphanumerical-sample-names-czjf5
Source commit: 4c165f546f
Source message: Fix detection of FASTQ files non-alphanumerical characters in the sample names.
50 lines
1.6 KiB
JSON
50 lines
1.6 KiB
JSON
{
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"$schema": "https://json-schema.org/draft/2020-12/schema",
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"title": "create_fdata",
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"description": "Create a fdata file\n",
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"type": "object",
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"$defs": {
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"arguments": {
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"title": "Arguments",
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"type": "object",
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"description": "No description",
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"properties": {
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"gtf": {
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"type": "string",
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"format": "path",
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"exists": true,
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"description": "Genome annotation file in GTF format.",
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"help_text": "Type: `file`, multiple: `False`, required, direction: `input`. "
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},
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"output": {
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"type": "string",
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"format": "path",
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"description": "Tab-delimited text file containing information about the 'gene' or 'transcript'\nentries from the input GTF file",
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"help_text": "Type: `file`, multiple: `False`, default: `\"fData.$id.txt\"`, direction: `output`. ",
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"default": "fData.$id.txt"
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}
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}
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},
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"nextflow input-output arguments": {
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"title": "Nextflow input-output arguments",
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"type": "object",
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"description": "Input/output parameters for Nextflow itself. Please note that both publishDir and publish_dir are supported but at least one has to be configured.",
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"properties": {
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"publish_dir": {
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"type": "string",
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"description": "Path to an output directory.",
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"help_text": "Type: `string`, multiple: `False`, required, example: `\"output/\"`. "
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}
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}
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}
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},
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"allOf": [
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{
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"$ref": "#/$defs/arguments"
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},
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{
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"$ref": "#/$defs/nextflow input-output arguments"
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}
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]
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}
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