# Arguments
input: # please fill in - example: "path/to/file"
# output: "$id.$key.output"
modality: "rna"
obsm_input: "X_pca"
obsm_output: "X_pca_integrated"
theta: [2.0]
obs_covariates: # please fill in - example: ["batch", "sample"]
# output_compression: "gzip"

# Nextflow input-output arguments
publish_dir: # please fill in - example: "output/"
# param_list: "my_params.yaml"
