# Inputs
input: # please fill in - example: "input.h5mu"
modality: "rna"
uns_neighbors: "neighbors"

# Outputs
# output: "$id.$key.output.h5mu"
obsm_output: "umap"
# output_compression: "gzip"

# Arguments
min_dist: 0.5
spread: 1.0
num_components: 2
# max_iter: 123
alpha: 1.0
gamma: 1.0
negative_sample_rate: 5
init_pos: "spectral"

# Nextflow input-output arguments
publish_dir: # please fill in - example: "output/"
# param_list: "my_params.yaml"
