19 lines
383 B
Bash
19 lines
383 B
Bash
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#!/bin/bash
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set -eo pipefail
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# get the root of the directory
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REPO_ROOT=$(git rev-parse --show-toplevel)
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# ensure that the command below is run from the root of the repository
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cd "$REPO_ROOT"
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DIR="resources_test/GRCh38"
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mkdir -p $DIR
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aws s3 sync \
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--profile di \
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s3://openpipelines-bio/openpipeline_spatial/resources_test/GRCh38 \
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"$DIR" \
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--delete \
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--dryrun
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