From 42ebb8ebd2e93c3d471a4b162af81b251ead53f0 Mon Sep 17 00:00:00 2001 From: CI Date: Tue, 18 Nov 2025 15:41:24 +0000 Subject: [PATCH] Build branch openpipeline_spatial/downgrade-squidpy with version downgrade-squidpy to openpipeline_spatial on branch downgrade-squidpy (803b041) Build pipeline: openpipelines-bio.openpipeline-spatial.downgrade-squidpy-clbkj Source commit: https://github.com/openpipelines-bio/openpipeline_spatial/commit/803b041ef1eeef9d77af23fa4544fa36e4ef3763 Source message: fixup --- target/_private/executable/filter/subset_cosmx/subset_cosmx | 2 +- .../convert/from_cells2stats_to_h5mu/from_cells2stats_to_h5mu | 2 +- target/executable/convert/from_cosmx_to_h5mu/from_cosmx_to_h5mu | 2 +- .../from_cosmx_to_spatialexperiment | 2 +- .../from_h5mu_to_spatialexperiment | 2 +- .../convert/from_spatialdata_to_h5mu/from_spatialdata_to_h5mu | 2 +- .../executable/convert/from_xenium_to_h5mu/from_xenium_to_h5mu | 2 +- .../from_xenium_to_spatialdata/from_xenium_to_spatialdata | 2 +- .../from_xenium_to_spatialexperiment | 2 +- target/executable/mapping/spaceranger_count/spaceranger_count | 2 +- 10 files changed, 10 insertions(+), 10 deletions(-) diff --git a/target/_private/executable/filter/subset_cosmx/subset_cosmx b/target/_private/executable/filter/subset_cosmx/subset_cosmx index 2563826..96ce9ec 100755 --- a/target/_private/executable/filter/subset_cosmx/subset_cosmx +++ b/target/_private/executable/filter/subset_cosmx/subset_cosmx @@ -458,7 +458,7 @@ RUN pip install --upgrade pip && \ LABEL org.opencontainers.image.authors="Dorien Roosen, Weiwei Schultz" LABEL org.opencontainers.image.description="Companion container for running component filter subset_cosmx" -LABEL org.opencontainers.image.created="2025-11-18T13:37:30Z" +LABEL org.opencontainers.image.created="2025-11-18T15:22:07Z" LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline_spatial" LABEL org.opencontainers.image.revision="803b041ef1eeef9d77af23fa4544fa36e4ef3763" LABEL org.opencontainers.image.version="downgrade-squidpy" diff --git a/target/executable/convert/from_cells2stats_to_h5mu/from_cells2stats_to_h5mu b/target/executable/convert/from_cells2stats_to_h5mu/from_cells2stats_to_h5mu index c64970f..8c5d308 100755 --- a/target/executable/convert/from_cells2stats_to_h5mu/from_cells2stats_to_h5mu +++ b/target/executable/convert/from_cells2stats_to_h5mu/from_cells2stats_to_h5mu @@ -459,7 +459,7 @@ RUN pip install --upgrade pip && \ LABEL org.opencontainers.image.authors="Dorien Roosen" LABEL org.opencontainers.image.description="Companion container for running component convert from_cells2stats_to_h5mu" -LABEL org.opencontainers.image.created="2025-11-18T13:37:31Z" +LABEL org.opencontainers.image.created="2025-11-18T15:22:07Z" LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline_spatial" LABEL org.opencontainers.image.revision="803b041ef1eeef9d77af23fa4544fa36e4ef3763" LABEL org.opencontainers.image.version="downgrade-squidpy" diff --git a/target/executable/convert/from_cosmx_to_h5mu/from_cosmx_to_h5mu b/target/executable/convert/from_cosmx_to_h5mu/from_cosmx_to_h5mu index efea289..076445b 100755 --- a/target/executable/convert/from_cosmx_to_h5mu/from_cosmx_to_h5mu +++ b/target/executable/convert/from_cosmx_to_h5mu/from_cosmx_to_h5mu @@ -460,7 +460,7 @@ RUN pip install --upgrade pip && \ LABEL org.opencontainers.image.authors="Dorien Roosen, Weiwei Schultz" LABEL org.opencontainers.image.description="Companion container for running component convert from_cosmx_to_h5mu" -LABEL org.opencontainers.image.created="2025-11-18T13:37:30Z" +LABEL org.opencontainers.image.created="2025-11-18T15:22:07Z" LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline_spatial" LABEL org.opencontainers.image.revision="803b041ef1eeef9d77af23fa4544fa36e4ef3763" LABEL org.opencontainers.image.version="downgrade-squidpy" diff --git a/target/executable/convert/from_cosmx_to_spatialexperiment/from_cosmx_to_spatialexperiment b/target/executable/convert/from_cosmx_to_spatialexperiment/from_cosmx_to_spatialexperiment index 412d356..23f9cbb 100755 --- a/target/executable/convert/from_cosmx_to_spatialexperiment/from_cosmx_to_spatialexperiment +++ b/target/executable/convert/from_cosmx_to_spatialexperiment/from_cosmx_to_spatialexperiment @@ -457,7 +457,7 @@ RUN Rscript -e 'options(warn = 2); if (!requireNamespace("BiocManager", quietly LABEL org.opencontainers.image.authors="Dorien Roosen" LABEL org.opencontainers.image.description="Companion container for running component convert from_cosmx_to_spatialexperiment" -LABEL org.opencontainers.image.created="2025-11-18T13:37:30Z" +LABEL org.opencontainers.image.created="2025-11-18T15:22:07Z" LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline_spatial" LABEL org.opencontainers.image.revision="803b041ef1eeef9d77af23fa4544fa36e4ef3763" LABEL org.opencontainers.image.version="downgrade-squidpy" diff --git a/target/executable/convert/from_h5mu_to_spatialexperiment/from_h5mu_to_spatialexperiment b/target/executable/convert/from_h5mu_to_spatialexperiment/from_h5mu_to_spatialexperiment index af61c69..2315ff1 100755 --- a/target/executable/convert/from_h5mu_to_spatialexperiment/from_h5mu_to_spatialexperiment +++ b/target/executable/convert/from_h5mu_to_spatialexperiment/from_h5mu_to_spatialexperiment @@ -458,7 +458,7 @@ RUN Rscript -e 'options(warn = 2); if (!requireNamespace("remotes", quietly = TR LABEL org.opencontainers.image.authors="Dorien Roosen" LABEL org.opencontainers.image.description="Companion container for running component convert from_h5mu_to_spatialexperiment" -LABEL org.opencontainers.image.created="2025-11-18T13:37:31Z" +LABEL org.opencontainers.image.created="2025-11-18T15:22:08Z" LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline_spatial" LABEL org.opencontainers.image.revision="803b041ef1eeef9d77af23fa4544fa36e4ef3763" LABEL org.opencontainers.image.version="downgrade-squidpy" diff --git a/target/executable/convert/from_spatialdata_to_h5mu/from_spatialdata_to_h5mu b/target/executable/convert/from_spatialdata_to_h5mu/from_spatialdata_to_h5mu index b631b54..0fc923e 100755 --- a/target/executable/convert/from_spatialdata_to_h5mu/from_spatialdata_to_h5mu +++ b/target/executable/convert/from_spatialdata_to_h5mu/from_spatialdata_to_h5mu @@ -459,7 +459,7 @@ RUN pip install --upgrade pip && \ LABEL org.opencontainers.image.authors="Dorien Roosen, Weiwei Schultz" LABEL org.opencontainers.image.description="Companion container for running component convert from_spatialdata_to_h5mu" -LABEL org.opencontainers.image.created="2025-11-18T13:37:31Z" +LABEL org.opencontainers.image.created="2025-11-18T15:22:07Z" LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline_spatial" LABEL org.opencontainers.image.revision="803b041ef1eeef9d77af23fa4544fa36e4ef3763" LABEL org.opencontainers.image.version="downgrade-squidpy" diff --git a/target/executable/convert/from_xenium_to_h5mu/from_xenium_to_h5mu b/target/executable/convert/from_xenium_to_h5mu/from_xenium_to_h5mu index 58fcdc8..bd422b5 100755 --- a/target/executable/convert/from_xenium_to_h5mu/from_xenium_to_h5mu +++ b/target/executable/convert/from_xenium_to_h5mu/from_xenium_to_h5mu @@ -459,7 +459,7 @@ RUN pip install --upgrade pip && \ LABEL org.opencontainers.image.authors="Dorien Roosen" LABEL org.opencontainers.image.description="Companion container for running component convert from_xenium_to_h5mu" -LABEL org.opencontainers.image.created="2025-11-18T13:37:31Z" +LABEL org.opencontainers.image.created="2025-11-18T15:22:07Z" LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline_spatial" LABEL org.opencontainers.image.revision="803b041ef1eeef9d77af23fa4544fa36e4ef3763" LABEL org.opencontainers.image.version="downgrade-squidpy" diff --git a/target/executable/convert/from_xenium_to_spatialdata/from_xenium_to_spatialdata b/target/executable/convert/from_xenium_to_spatialdata/from_xenium_to_spatialdata index c5cbcae..a3311b1 100755 --- a/target/executable/convert/from_xenium_to_spatialdata/from_xenium_to_spatialdata +++ b/target/executable/convert/from_xenium_to_spatialdata/from_xenium_to_spatialdata @@ -459,7 +459,7 @@ RUN pip install --upgrade pip && \ LABEL org.opencontainers.image.authors="Dorien Roosen, Weiwei Schultz" LABEL org.opencontainers.image.description="Companion container for running component convert from_xenium_to_spatialdata" -LABEL org.opencontainers.image.created="2025-11-18T13:37:30Z" +LABEL org.opencontainers.image.created="2025-11-18T15:22:07Z" LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline_spatial" LABEL org.opencontainers.image.revision="803b041ef1eeef9d77af23fa4544fa36e4ef3763" LABEL org.opencontainers.image.version="downgrade-squidpy" diff --git a/target/executable/convert/from_xenium_to_spatialexperiment/from_xenium_to_spatialexperiment b/target/executable/convert/from_xenium_to_spatialexperiment/from_xenium_to_spatialexperiment index e6fa6d2..770abd5 100755 --- a/target/executable/convert/from_xenium_to_spatialexperiment/from_xenium_to_spatialexperiment +++ b/target/executable/convert/from_xenium_to_spatialexperiment/from_xenium_to_spatialexperiment @@ -457,7 +457,7 @@ RUN Rscript -e 'options(warn = 2); if (!requireNamespace("BiocManager", quietly LABEL org.opencontainers.image.authors="Dorien Roosen" LABEL org.opencontainers.image.description="Companion container for running component convert from_xenium_to_spatialexperiment" -LABEL org.opencontainers.image.created="2025-11-18T13:37:31Z" +LABEL org.opencontainers.image.created="2025-11-18T15:22:08Z" LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline_spatial" LABEL org.opencontainers.image.revision="803b041ef1eeef9d77af23fa4544fa36e4ef3763" LABEL org.opencontainers.image.version="downgrade-squidpy" diff --git a/target/executable/mapping/spaceranger_count/spaceranger_count b/target/executable/mapping/spaceranger_count/spaceranger_count index 97fbd00..800d52a 100755 --- a/target/executable/mapping/spaceranger_count/spaceranger_count +++ b/target/executable/mapping/spaceranger_count/spaceranger_count @@ -453,7 +453,7 @@ apt upgrade -y && apt install -y procps && rm -rf /var/lib/apt/lists/* LABEL org.opencontainers.image.authors="Jakub Majercik" LABEL org.opencontainers.image.description="Companion container for running component mapping spaceranger_count" -LABEL org.opencontainers.image.created="2025-11-18T13:37:31Z" +LABEL org.opencontainers.image.created="2025-11-18T15:22:08Z" LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline_spatial" LABEL org.opencontainers.image.revision="803b041ef1eeef9d77af23fa4544fa36e4ef3763" LABEL org.opencontainers.image.version="downgrade-squidpy"