From 9784094499c8ce687da6ad066eff2218bd76b3dd Mon Sep 17 00:00:00 2001
From: CI <toni@data-intuitive.com>
Date: Fri, 6 Jun 2025 10:04:01 +0000
Subject: [PATCH] Build branch build/main with version build_main (f502b8c)

Build pipeline: openpipelines-bio.openpipeline-spatial.build-main-rlkth

Source commit: https://github.com/openpipelines-bio/openpipeline_spatial/commit/f502b8c8edb0ca78b2f3f1eb43dcbcd966525fb4

Source message: deploy: 682726d700c3dfee0d010cfab173f7dca71a19b1
---
 _viash.yaml                                                 | 2 +-
 .../executable/convert/from_cosmx_to_h5mu/.config.vsh.yaml  | 4 ++--
 .../convert/from_cosmx_to_h5mu/from_cosmx_to_h5mu           | 6 +++---
 .../convert/from_spatialdata_to_h5mu/.config.vsh.yaml       | 4 ++--
 .../from_spatialdata_to_h5mu/from_spatialdata_to_h5mu       | 6 +++---
 .../convert/from_xenium_to_spatialdata/.config.vsh.yaml     | 4 ++--
 .../from_xenium_to_spatialdata/from_xenium_to_spatialdata   | 6 +++---
 target/executable/filter/subset_cosmx/.config.vsh.yaml      | 4 ++--
 target/executable/filter/subset_cosmx/subset_cosmx          | 6 +++---
 target/nextflow/convert/from_cosmx_to_h5mu/.config.vsh.yaml | 4 ++--
 target/nextflow/convert/from_cosmx_to_h5mu/main.nf          | 6 +++---
 .../convert/from_spatialdata_to_h5mu/.config.vsh.yaml       | 4 ++--
 target/nextflow/convert/from_spatialdata_to_h5mu/main.nf    | 6 +++---
 .../convert/from_xenium_to_spatialdata/.config.vsh.yaml     | 4 ++--
 target/nextflow/convert/from_xenium_to_spatialdata/main.nf  | 6 +++---
 target/nextflow/filter/subset_cosmx/.config.vsh.yaml        | 4 ++--
 target/nextflow/filter/subset_cosmx/main.nf                 | 6 +++---
 17 files changed, 41 insertions(+), 41 deletions(-)

diff --git a/_viash.yaml b/_viash.yaml
index 631e6a6..d85f9c1 100644
--- a/_viash.yaml
+++ b/_viash.yaml
@@ -1,7 +1,7 @@
 viash_version: 0.9.3
 source: src
 target: target
-name: incubator
+name: openpipeline_spatial
 organization: openpipelines-bio
 links:
   repository: https://github.com/openpipelines-bio/openpipeline_spatial
diff --git a/target/executable/convert/from_cosmx_to_h5mu/.config.vsh.yaml b/target/executable/convert/from_cosmx_to_h5mu/.config.vsh.yaml
index 67bc016..1a52c72 100644
--- a/target/executable/convert/from_cosmx_to_h5mu/.config.vsh.yaml
+++ b/target/executable/convert/from_cosmx_to_h5mu/.config.vsh.yaml
@@ -231,10 +231,10 @@ build_info:
   output: "target/executable/convert/from_cosmx_to_h5mu"
   executable: "target/executable/convert/from_cosmx_to_h5mu/from_cosmx_to_h5mu"
   viash_version: "0.9.3"
-  git_commit: "4e9723127ddb6353bf8f7f2ed65f880f77cbe764"
+  git_commit: "f502b8c8edb0ca78b2f3f1eb43dcbcd966525fb4"
   git_remote: "https://github.com/openpipelines-bio/openpipeline_spatial"
 package_config:
-  name: "incubator"
+  name: "openpipeline_spatial"
   version: "build_main"
   info:
     test_resources:
diff --git a/target/executable/convert/from_cosmx_to_h5mu/from_cosmx_to_h5mu b/target/executable/convert/from_cosmx_to_h5mu/from_cosmx_to_h5mu
index 7df084f..11c929d 100755
--- a/target/executable/convert/from_cosmx_to_h5mu/from_cosmx_to_h5mu
+++ b/target/executable/convert/from_cosmx_to_h5mu/from_cosmx_to_h5mu
@@ -458,9 +458,9 @@ RUN pip install --upgrade pip && \
 
 LABEL org.opencontainers.image.authors="Dorien Roosen, Weiwei Schultz"
 LABEL org.opencontainers.image.description="Companion container for running component convert from_cosmx_to_h5mu"
-LABEL org.opencontainers.image.created="2025-06-06T07:01:22Z"
+LABEL org.opencontainers.image.created="2025-06-06T09:56:25Z"
 LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline_spatial"
-LABEL org.opencontainers.image.revision="4e9723127ddb6353bf8f7f2ed65f880f77cbe764"
+LABEL org.opencontainers.image.revision="f502b8c8edb0ca78b2f3f1eb43dcbcd966525fb4"
 LABEL org.opencontainers.image.version="build_main"
 
 VIASHDOCKER
@@ -828,7 +828,7 @@ if [[ "$VIASH_ENGINE_TYPE" == "docker" ]]; then
 
   # determine docker image id
   if [[ "$VIASH_ENGINE_ID" == 'docker' ]]; then
-    VIASH_DOCKER_IMAGE_ID='images.viash-hub.com/vsh/incubator/convert/from_cosmx_to_h5mu:build_main'
+    VIASH_DOCKER_IMAGE_ID='images.viash-hub.com/vsh/openpipeline_spatial/convert/from_cosmx_to_h5mu:build_main'
   fi
 
   # print dockerfile
diff --git a/target/executable/convert/from_spatialdata_to_h5mu/.config.vsh.yaml b/target/executable/convert/from_spatialdata_to_h5mu/.config.vsh.yaml
index 295d36f..db06fa4 100644
--- a/target/executable/convert/from_spatialdata_to_h5mu/.config.vsh.yaml
+++ b/target/executable/convert/from_spatialdata_to_h5mu/.config.vsh.yaml
@@ -217,10 +217,10 @@ build_info:
   output: "target/executable/convert/from_spatialdata_to_h5mu"
   executable: "target/executable/convert/from_spatialdata_to_h5mu/from_spatialdata_to_h5mu"
   viash_version: "0.9.3"
-  git_commit: "4e9723127ddb6353bf8f7f2ed65f880f77cbe764"
+  git_commit: "f502b8c8edb0ca78b2f3f1eb43dcbcd966525fb4"
   git_remote: "https://github.com/openpipelines-bio/openpipeline_spatial"
 package_config:
-  name: "incubator"
+  name: "openpipeline_spatial"
   version: "build_main"
   info:
     test_resources:
diff --git a/target/executable/convert/from_spatialdata_to_h5mu/from_spatialdata_to_h5mu b/target/executable/convert/from_spatialdata_to_h5mu/from_spatialdata_to_h5mu
index bd79cc2..f074eb3 100755
--- a/target/executable/convert/from_spatialdata_to_h5mu/from_spatialdata_to_h5mu
+++ b/target/executable/convert/from_spatialdata_to_h5mu/from_spatialdata_to_h5mu
@@ -458,9 +458,9 @@ RUN pip install --upgrade pip && \
 
 LABEL org.opencontainers.image.authors="Dorien Roosen, Weiwei Schultz"
 LABEL org.opencontainers.image.description="Companion container for running component convert from_spatialdata_to_h5mu"
-LABEL org.opencontainers.image.created="2025-06-06T07:01:22Z"
+LABEL org.opencontainers.image.created="2025-06-06T09:56:25Z"
 LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline_spatial"
-LABEL org.opencontainers.image.revision="4e9723127ddb6353bf8f7f2ed65f880f77cbe764"
+LABEL org.opencontainers.image.revision="f502b8c8edb0ca78b2f3f1eb43dcbcd966525fb4"
 LABEL org.opencontainers.image.version="build_main"
 
 VIASHDOCKER
@@ -797,7 +797,7 @@ if [[ "$VIASH_ENGINE_TYPE" == "docker" ]]; then
 
   # determine docker image id
   if [[ "$VIASH_ENGINE_ID" == 'docker' ]]; then
-    VIASH_DOCKER_IMAGE_ID='images.viash-hub.com/vsh/incubator/convert/from_spatialdata_to_h5mu:build_main'
+    VIASH_DOCKER_IMAGE_ID='images.viash-hub.com/vsh/openpipeline_spatial/convert/from_spatialdata_to_h5mu:build_main'
   fi
 
   # print dockerfile
diff --git a/target/executable/convert/from_xenium_to_spatialdata/.config.vsh.yaml b/target/executable/convert/from_xenium_to_spatialdata/.config.vsh.yaml
index 9998f0e..2ae2c1b 100644
--- a/target/executable/convert/from_xenium_to_spatialdata/.config.vsh.yaml
+++ b/target/executable/convert/from_xenium_to_spatialdata/.config.vsh.yaml
@@ -314,10 +314,10 @@ build_info:
   output: "target/executable/convert/from_xenium_to_spatialdata"
   executable: "target/executable/convert/from_xenium_to_spatialdata/from_xenium_to_spatialdata"
   viash_version: "0.9.3"
-  git_commit: "4e9723127ddb6353bf8f7f2ed65f880f77cbe764"
+  git_commit: "f502b8c8edb0ca78b2f3f1eb43dcbcd966525fb4"
   git_remote: "https://github.com/openpipelines-bio/openpipeline_spatial"
 package_config:
-  name: "incubator"
+  name: "openpipeline_spatial"
   version: "build_main"
   info:
     test_resources:
diff --git a/target/executable/convert/from_xenium_to_spatialdata/from_xenium_to_spatialdata b/target/executable/convert/from_xenium_to_spatialdata/from_xenium_to_spatialdata
index b2af291..b297a33 100755
--- a/target/executable/convert/from_xenium_to_spatialdata/from_xenium_to_spatialdata
+++ b/target/executable/convert/from_xenium_to_spatialdata/from_xenium_to_spatialdata
@@ -458,9 +458,9 @@ RUN pip install --upgrade pip && \
 
 LABEL org.opencontainers.image.authors="Dorien Roosen, Weiwei Schultz"
 LABEL org.opencontainers.image.description="Companion container for running component convert from_xenium_to_spatialdata"
-LABEL org.opencontainers.image.created="2025-06-06T07:01:22Z"
+LABEL org.opencontainers.image.created="2025-06-06T09:56:25Z"
 LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline_spatial"
-LABEL org.opencontainers.image.revision="4e9723127ddb6353bf8f7f2ed65f880f77cbe764"
+LABEL org.opencontainers.image.revision="f502b8c8edb0ca78b2f3f1eb43dcbcd966525fb4"
 LABEL org.opencontainers.image.version="build_main"
 
 VIASHDOCKER
@@ -951,7 +951,7 @@ if [[ "$VIASH_ENGINE_TYPE" == "docker" ]]; then
 
   # determine docker image id
   if [[ "$VIASH_ENGINE_ID" == 'docker' ]]; then
-    VIASH_DOCKER_IMAGE_ID='images.viash-hub.com/vsh/incubator/convert/from_xenium_to_spatialdata:build_main'
+    VIASH_DOCKER_IMAGE_ID='images.viash-hub.com/vsh/openpipeline_spatial/convert/from_xenium_to_spatialdata:build_main'
   fi
 
   # print dockerfile
diff --git a/target/executable/filter/subset_cosmx/.config.vsh.yaml b/target/executable/filter/subset_cosmx/.config.vsh.yaml
index c93ef92..9e20432 100644
--- a/target/executable/filter/subset_cosmx/.config.vsh.yaml
+++ b/target/executable/filter/subset_cosmx/.config.vsh.yaml
@@ -217,10 +217,10 @@ build_info:
   output: "target/executable/filter/subset_cosmx"
   executable: "target/executable/filter/subset_cosmx/subset_cosmx"
   viash_version: "0.9.3"
-  git_commit: "4e9723127ddb6353bf8f7f2ed65f880f77cbe764"
+  git_commit: "f502b8c8edb0ca78b2f3f1eb43dcbcd966525fb4"
   git_remote: "https://github.com/openpipelines-bio/openpipeline_spatial"
 package_config:
-  name: "incubator"
+  name: "openpipeline_spatial"
   version: "build_main"
   info:
     test_resources:
diff --git a/target/executable/filter/subset_cosmx/subset_cosmx b/target/executable/filter/subset_cosmx/subset_cosmx
index 0ead10c..a8c2cc2 100755
--- a/target/executable/filter/subset_cosmx/subset_cosmx
+++ b/target/executable/filter/subset_cosmx/subset_cosmx
@@ -458,9 +458,9 @@ RUN pip install --upgrade pip && \
 
 LABEL org.opencontainers.image.authors="Dorien Roosen, Weiwei Schultz"
 LABEL org.opencontainers.image.description="Companion container for running component filter subset_cosmx"
-LABEL org.opencontainers.image.created="2025-06-06T07:01:22Z"
+LABEL org.opencontainers.image.created="2025-06-06T09:56:25Z"
 LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline_spatial"
-LABEL org.opencontainers.image.revision="4e9723127ddb6353bf8f7f2ed65f880f77cbe764"
+LABEL org.opencontainers.image.revision="f502b8c8edb0ca78b2f3f1eb43dcbcd966525fb4"
 LABEL org.opencontainers.image.version="build_main"
 
 VIASHDOCKER
@@ -816,7 +816,7 @@ if [[ "$VIASH_ENGINE_TYPE" == "docker" ]]; then
 
   # determine docker image id
   if [[ "$VIASH_ENGINE_ID" == 'docker' ]]; then
-    VIASH_DOCKER_IMAGE_ID='images.viash-hub.com/vsh/incubator/filter/subset_cosmx:build_main'
+    VIASH_DOCKER_IMAGE_ID='images.viash-hub.com/vsh/openpipeline_spatial/filter/subset_cosmx:build_main'
   fi
 
   # print dockerfile
diff --git a/target/nextflow/convert/from_cosmx_to_h5mu/.config.vsh.yaml b/target/nextflow/convert/from_cosmx_to_h5mu/.config.vsh.yaml
index e72d8c5..c62861e 100644
--- a/target/nextflow/convert/from_cosmx_to_h5mu/.config.vsh.yaml
+++ b/target/nextflow/convert/from_cosmx_to_h5mu/.config.vsh.yaml
@@ -231,10 +231,10 @@ build_info:
   output: "target/nextflow/convert/from_cosmx_to_h5mu"
   executable: "target/nextflow/convert/from_cosmx_to_h5mu/main.nf"
   viash_version: "0.9.3"
-  git_commit: "4e9723127ddb6353bf8f7f2ed65f880f77cbe764"
+  git_commit: "f502b8c8edb0ca78b2f3f1eb43dcbcd966525fb4"
   git_remote: "https://github.com/openpipelines-bio/openpipeline_spatial"
 package_config:
-  name: "incubator"
+  name: "openpipeline_spatial"
   version: "build_main"
   info:
     test_resources:
diff --git a/target/nextflow/convert/from_cosmx_to_h5mu/main.nf b/target/nextflow/convert/from_cosmx_to_h5mu/main.nf
index e5fa4f2..ee43249 100644
--- a/target/nextflow/convert/from_cosmx_to_h5mu/main.nf
+++ b/target/nextflow/convert/from_cosmx_to_h5mu/main.nf
@@ -3340,11 +3340,11 @@ meta = [
     "engine" : "docker|native",
     "output" : "/workdir/root/repo/target/nextflow/convert/from_cosmx_to_h5mu",
     "viash_version" : "0.9.3",
-    "git_commit" : "4e9723127ddb6353bf8f7f2ed65f880f77cbe764",
+    "git_commit" : "f502b8c8edb0ca78b2f3f1eb43dcbcd966525fb4",
     "git_remote" : "https://github.com/openpipelines-bio/openpipeline_spatial"
   },
   "package_config" : {
-    "name" : "incubator",
+    "name" : "openpipeline_spatial",
     "version" : "build_main",
     "info" : {
       "test_resources" : [
@@ -3834,7 +3834,7 @@ meta["defaults"] = [
   directives: readJsonBlob('''{
   "container" : {
     "registry" : "images.viash-hub.com",
-    "image" : "vsh/incubator/convert/from_cosmx_to_h5mu",
+    "image" : "vsh/openpipeline_spatial/convert/from_cosmx_to_h5mu",
     "tag" : "build_main"
   },
   "label" : [
diff --git a/target/nextflow/convert/from_spatialdata_to_h5mu/.config.vsh.yaml b/target/nextflow/convert/from_spatialdata_to_h5mu/.config.vsh.yaml
index 7de4d95..0ddfe3d 100644
--- a/target/nextflow/convert/from_spatialdata_to_h5mu/.config.vsh.yaml
+++ b/target/nextflow/convert/from_spatialdata_to_h5mu/.config.vsh.yaml
@@ -217,10 +217,10 @@ build_info:
   output: "target/nextflow/convert/from_spatialdata_to_h5mu"
   executable: "target/nextflow/convert/from_spatialdata_to_h5mu/main.nf"
   viash_version: "0.9.3"
-  git_commit: "4e9723127ddb6353bf8f7f2ed65f880f77cbe764"
+  git_commit: "f502b8c8edb0ca78b2f3f1eb43dcbcd966525fb4"
   git_remote: "https://github.com/openpipelines-bio/openpipeline_spatial"
 package_config:
-  name: "incubator"
+  name: "openpipeline_spatial"
   version: "build_main"
   info:
     test_resources:
diff --git a/target/nextflow/convert/from_spatialdata_to_h5mu/main.nf b/target/nextflow/convert/from_spatialdata_to_h5mu/main.nf
index 82c699f..ab683e9 100644
--- a/target/nextflow/convert/from_spatialdata_to_h5mu/main.nf
+++ b/target/nextflow/convert/from_spatialdata_to_h5mu/main.nf
@@ -3332,11 +3332,11 @@ meta = [
     "engine" : "docker|native",
     "output" : "/workdir/root/repo/target/nextflow/convert/from_spatialdata_to_h5mu",
     "viash_version" : "0.9.3",
-    "git_commit" : "4e9723127ddb6353bf8f7f2ed65f880f77cbe764",
+    "git_commit" : "f502b8c8edb0ca78b2f3f1eb43dcbcd966525fb4",
     "git_remote" : "https://github.com/openpipelines-bio/openpipeline_spatial"
   },
   "package_config" : {
-    "name" : "incubator",
+    "name" : "openpipeline_spatial",
     "version" : "build_main",
     "info" : {
       "test_resources" : [
@@ -3815,7 +3815,7 @@ meta["defaults"] = [
   directives: readJsonBlob('''{
   "container" : {
     "registry" : "images.viash-hub.com",
-    "image" : "vsh/incubator/convert/from_spatialdata_to_h5mu",
+    "image" : "vsh/openpipeline_spatial/convert/from_spatialdata_to_h5mu",
     "tag" : "build_main"
   },
   "label" : [
diff --git a/target/nextflow/convert/from_xenium_to_spatialdata/.config.vsh.yaml b/target/nextflow/convert/from_xenium_to_spatialdata/.config.vsh.yaml
index 3782c18..d76352b 100644
--- a/target/nextflow/convert/from_xenium_to_spatialdata/.config.vsh.yaml
+++ b/target/nextflow/convert/from_xenium_to_spatialdata/.config.vsh.yaml
@@ -314,10 +314,10 @@ build_info:
   output: "target/nextflow/convert/from_xenium_to_spatialdata"
   executable: "target/nextflow/convert/from_xenium_to_spatialdata/main.nf"
   viash_version: "0.9.3"
-  git_commit: "4e9723127ddb6353bf8f7f2ed65f880f77cbe764"
+  git_commit: "f502b8c8edb0ca78b2f3f1eb43dcbcd966525fb4"
   git_remote: "https://github.com/openpipelines-bio/openpipeline_spatial"
 package_config:
-  name: "incubator"
+  name: "openpipeline_spatial"
   version: "build_main"
   info:
     test_resources:
diff --git a/target/nextflow/convert/from_xenium_to_spatialdata/main.nf b/target/nextflow/convert/from_xenium_to_spatialdata/main.nf
index 79b2bb1..b914f09 100644
--- a/target/nextflow/convert/from_xenium_to_spatialdata/main.nf
+++ b/target/nextflow/convert/from_xenium_to_spatialdata/main.nf
@@ -3430,11 +3430,11 @@ meta = [
     "engine" : "docker|native",
     "output" : "/workdir/root/repo/target/nextflow/convert/from_xenium_to_spatialdata",
     "viash_version" : "0.9.3",
-    "git_commit" : "4e9723127ddb6353bf8f7f2ed65f880f77cbe764",
+    "git_commit" : "f502b8c8edb0ca78b2f3f1eb43dcbcd966525fb4",
     "git_remote" : "https://github.com/openpipelines-bio/openpipeline_spatial"
   },
   "package_config" : {
-    "name" : "incubator",
+    "name" : "openpipeline_spatial",
     "version" : "build_main",
     "info" : {
       "test_resources" : [
@@ -3931,7 +3931,7 @@ meta["defaults"] = [
   directives: readJsonBlob('''{
   "container" : {
     "registry" : "images.viash-hub.com",
-    "image" : "vsh/incubator/convert/from_xenium_to_spatialdata",
+    "image" : "vsh/openpipeline_spatial/convert/from_xenium_to_spatialdata",
     "tag" : "build_main"
   },
   "label" : [
diff --git a/target/nextflow/filter/subset_cosmx/.config.vsh.yaml b/target/nextflow/filter/subset_cosmx/.config.vsh.yaml
index 6a99eda..42139a4 100644
--- a/target/nextflow/filter/subset_cosmx/.config.vsh.yaml
+++ b/target/nextflow/filter/subset_cosmx/.config.vsh.yaml
@@ -217,10 +217,10 @@ build_info:
   output: "target/nextflow/filter/subset_cosmx"
   executable: "target/nextflow/filter/subset_cosmx/main.nf"
   viash_version: "0.9.3"
-  git_commit: "4e9723127ddb6353bf8f7f2ed65f880f77cbe764"
+  git_commit: "f502b8c8edb0ca78b2f3f1eb43dcbcd966525fb4"
   git_remote: "https://github.com/openpipelines-bio/openpipeline_spatial"
 package_config:
-  name: "incubator"
+  name: "openpipeline_spatial"
   version: "build_main"
   info:
     test_resources:
diff --git a/target/nextflow/filter/subset_cosmx/main.nf b/target/nextflow/filter/subset_cosmx/main.nf
index 8500436..f35d67b 100644
--- a/target/nextflow/filter/subset_cosmx/main.nf
+++ b/target/nextflow/filter/subset_cosmx/main.nf
@@ -3322,11 +3322,11 @@ meta = [
     "engine" : "docker|native",
     "output" : "/workdir/root/repo/target/nextflow/filter/subset_cosmx",
     "viash_version" : "0.9.3",
-    "git_commit" : "4e9723127ddb6353bf8f7f2ed65f880f77cbe764",
+    "git_commit" : "f502b8c8edb0ca78b2f3f1eb43dcbcd966525fb4",
     "git_remote" : "https://github.com/openpipelines-bio/openpipeline_spatial"
   },
   "package_config" : {
-    "name" : "incubator",
+    "name" : "openpipeline_spatial",
     "version" : "build_main",
     "info" : {
       "test_resources" : [
@@ -3832,7 +3832,7 @@ meta["defaults"] = [
   directives: readJsonBlob('''{
   "container" : {
     "registry" : "images.viash-hub.com",
-    "image" : "vsh/incubator/filter/subset_cosmx",
+    "image" : "vsh/openpipeline_spatial/filter/subset_cosmx",
     "tag" : "build_main"
   },
   "label" : [