CI
c6296af264
Build pipeline: test-vsh-ci-build-template-qlrkg
Source commit: 3b5314b60d
Source message: update changelog
16 lines
395 B
Bash
16 lines
395 B
Bash
#!/bin/bash
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# get the root of the directory
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REPO_ROOT=$(git rev-parse --show-toplevel)
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# ensure that the command below is run from the root of the repository
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cd "$REPO_ROOT"
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nextflow \
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run . \
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-main-script src/workflows/qc/spatial_qc/test.nf \
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-entry test_wf \
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-profile docker,no_publish \
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-c src/workflows/utils/labels_ci.config \
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-c src/workflows/utils/integration_tests.config
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