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Build branch v0.1 with version v0.1.1 (0f49a3f)

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Build pipeline: vsh-ci-dev-w9454

Source commit: 0f49a3ff62

Source message: Bump version to v0.1.1
This commit is contained in:
CI
2024-10-17 17:31:01 +00:00
parent 69e0b1ebaf
commit 3e6bb670c5
246 changed files with 1539 additions and 1390 deletions
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13
target/executable/stringtie/.config.vsh.yaml
View File

@@ -1,5 +1,5 @@
name: "stringtie"
version: "v0.1.0"
version: "v0.1.1"
argument_groups:
- name: "Input"
arguments:
@@ -196,7 +196,7 @@ engines:
id: "docker"
image: "ubuntu:22.04"
target_registry: "images.viash-hub.com"
target_tag: "v0.1.0"
target_tag: "v0.1.1"
namespace_separator: "/"
setup:
- type: "docker"
@@ -216,10 +216,11 @@ build_info:
output: "target/executable/stringtie"
executable: "target/executable/stringtie/stringtie"
viash_version: "0.9.0"
git_commit: "ed1f6955d07b7dc1f4a606fc35a1176f7d70a6fa"
git_remote: "https://x-access-token:ghs_tXtyBoqiv8A2hCsnUFe4lEgzrzh9764dBmxo@github.com/viash-hub/rnaseq"
git_commit: "0f49a3ff62687a68af3e43608224d922a5fad518"
git_remote: "https://x-access-token:ghs_uqSddS0Zy4kGjO3RZOSoZ4S61aL57936NNSr@github.com/viash-hub/rnaseq"
package_config:
version: "v0.1.0"
name: "rnaseq"
version: "v0.1.1"
info:
test_resources:
- path: "gs://viash-hub-test-data/rnaseq/v1"
@@ -241,5 +242,5 @@ package_config:
\ := '$id'\n"
- ".engines += { type: \"native\" }"
- ".engines[.type == 'docker'].target_registry := 'images.viash-hub.com'"
- ".engines[.type == 'docker'].target_tag := 'v0.1.0'"
- ".engines[.type == 'docker'].target_tag := 'v0.1.1'"
organization: "vsh"

16
target/executable/stringtie/stringtie
View File

@@ -1,6 +1,6 @@
#!/usr/bin/env bash
# stringtie v0.1.0
# stringtie v0.1.1
#
# This wrapper script is auto-generated by viash 0.9.0 and is thus a derivative
# work thereof. This software comes with ABSOLUTELY NO WARRANTY from Data
@@ -171,7 +171,7 @@ VIASH_META_TEMP_DIR="$VIASH_TEMP"
# ViashHelp: Display helpful explanation about this executable
function ViashHelp {
echo "stringtie v0.1.0"
echo "stringtie v0.1.1"
echo ""
echo "Transcript assembly and quantification for RNA-Seq"
echo ""
@@ -496,10 +496,10 @@ tar -xzf stringtie-2.2.1.Linux_x86_64.tar.gz && \
cp stringtie-2.2.1.Linux_x86_64/stringtie /usr/local/bin/
LABEL org.opencontainers.image.description="Companion container for running component stringtie"
LABEL org.opencontainers.image.created="2024-10-04T11:21:54Z"
LABEL org.opencontainers.image.source="https://x-access-token/ghs_tXtyBoqiv8A2hCsnUFe4lEgzrzh9764dBmxo@github.com/viash-hub/rnaseq"
LABEL org.opencontainers.image.revision="ed1f6955d07b7dc1f4a606fc35a1176f7d70a6fa"
LABEL org.opencontainers.image.version="v0.1.0"
LABEL org.opencontainers.image.created="2024-10-17T16:18:26Z"
LABEL org.opencontainers.image.source="https://x-access-token/ghs_uqSddS0Zy4kGjO3RZOSoZ4S61aL57936NNSr@github.com/viash-hub/rnaseq"
LABEL org.opencontainers.image.revision="0f49a3ff62687a68af3e43608224d922a5fad518"
LABEL org.opencontainers.image.version="v0.1.1"
VIASHDOCKER
fi
@@ -635,7 +635,7 @@ while [[ $# -gt 0 ]]; do
shift 1
;;
--version)
echo "stringtie v0.1.0"
echo "stringtie v0.1.1"
exit
;;
--strandedness)
@@ -825,7 +825,7 @@ if [[ "$VIASH_ENGINE_TYPE" == "docker" ]]; then
# determine docker image id
if [[ "$VIASH_ENGINE_ID" == 'docker' ]]; then
VIASH_DOCKER_IMAGE_ID='images.viash-hub.com/vsh/stringtie:v0.1.0'
VIASH_DOCKER_IMAGE_ID='images.viash-hub.com/vsh/rnaseq/stringtie:v0.1.1'
fi
# print dockerfile