Build branch main with version main (fd0354d)

Build pipeline: vsh-ci-template-w7zwh

Source commit: fd0354dae8

Source message: Point to new assets dir

target/executable/bbmap_bbsplit/.config.vsh.yaml

@@ -239,7 +239,7 @@ build_info:
   executable: "target/executable/bbmap_bbsplit/bbmap_bbsplit"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/bbmap_bbsplit/bbmap_bbsplit

@@ -506,8 +506,8 @@ tar xzf BBMap_39.01.tar.gz && \
 cp -r bbmap/* /usr/local/bin
 
 LABEL org.opencontainers.image.description="Companion container for running component bbmap_bbsplit"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:05Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:12Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/bedtools_genomecov/.config.vsh.yaml

@@ -179,7 +179,7 @@ build_info:
   executable: "target/executable/bedtools_genomecov/bedtools_genomecov"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/bedtools_genomecov/bedtools_genomecov

@@ -481,8 +481,8 @@ mv bedtools.static /usr/local/bin/bedtools && \
 chmod a+x /usr/local/bin/bedtools
 
 LABEL org.opencontainers.image.description="Companion container for running component bedtools_genomecov"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:05Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:12Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/cat_additional_fasta/.config.vsh.yaml

@@ -183,7 +183,7 @@ build_info:
   executable: "target/executable/cat_additional_fasta/cat_additional_fasta"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/cat_additional_fasta/cat_additional_fasta

@@ -480,8 +480,8 @@ function ViashDockerfile {
 FROM python:latest
 ENTRYPOINT []
 LABEL org.opencontainers.image.description="Companion container for running component cat_additional_fasta"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:13Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:20Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/cat_fastq/.config.vsh.yaml

@@ -170,7 +170,7 @@ build_info:
   executable: "target/executable/cat_fastq/cat_fastq"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/cat_fastq/cat_fastq

@@ -472,8 +472,8 @@ function ViashDockerfile {
 FROM ubuntu:22.04
 ENTRYPOINT []
 LABEL org.opencontainers.image.description="Companion container for running component cat_fastq"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:13Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:21Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/deseq2_qc/.config.vsh.yaml

@@ -240,7 +240,7 @@ build_info:
   executable: "target/executable/deseq2_qc/deseq2_qc"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/deseq2_qc/deseq2_qc

@@ -502,8 +502,8 @@ RUN Rscript -e 'if (!requireNamespace("remotes", quietly = TRUE)) install.packag
   Rscript -e 'remotes::install_url(c("https://cran.r-project.org/src/contrib/Archive/matrixStats/matrixStats_1.1.0.tar.gz"), repos = "https://cran.rstudio.com")'
 
 LABEL org.opencontainers.image.description="Companion container for running component deseq2_qc"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:25Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:31Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/dupradar/.config.vsh.yaml

@@ -267,7 +267,7 @@ build_info:
   executable: "target/executable/dupradar/dupradar"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/dupradar/dupradar

@@ -520,8 +520,8 @@ RUN Rscript -e 'if (!requireNamespace("BiocManager", quietly = TRUE)) install.pa
   Rscript -e 'if (!requireNamespace("dupRadar", quietly = TRUE)) BiocManager::install("dupRadar")'
 
 LABEL org.opencontainers.image.description="Companion container for running component dupradar"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:14Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:22Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/fastqc/.config.vsh.yaml

@@ -199,7 +199,7 @@ build_info:
   executable: "target/executable/fastqc/fastqc"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/fastqc/fastqc

@@ -490,8 +490,8 @@ RUN apt-get update && \
   rm -rf /var/lib/apt/lists/*
 
 LABEL org.opencontainers.image.description="Companion container for running component fastqc"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:06Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:13Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/fq_subsample/.config.vsh.yaml

@@ -178,7 +178,7 @@ build_info:
   executable: "target/executable/fq_subsample/fq_subsample"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/fq_subsample/fq_subsample

@@ -485,8 +485,8 @@ cargo install --locked --path . && \
 mv /usr/local/fq/target/release/fq /usr/local/bin/
 
 LABEL org.opencontainers.image.description="Companion container for running component fq_subsample"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:06Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:13Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/getchromsizes/.config.vsh.yaml

@@ -168,7 +168,7 @@ build_info:
   executable: "target/executable/getchromsizes/getchromsizes"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/getchromsizes/getchromsizes

@@ -480,8 +480,8 @@ make && \
 make install
 
 LABEL org.opencontainers.image.description="Companion container for running component getchromsizes"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:07Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:14Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/gtf2bed/.config.vsh.yaml

@@ -146,7 +146,7 @@ build_info:
   executable: "target/executable/gtf2bed/gtf2bed"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/gtf2bed/gtf2bed

@@ -466,8 +466,8 @@ RUN apt-get update && \
   rm -rf /var/lib/apt/lists/*
 
 LABEL org.opencontainers.image.description="Companion container for running component gtf2bed"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:20Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:26Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/gtf_filter/.config.vsh.yaml

@@ -156,7 +156,7 @@ build_info:
   executable: "target/executable/gtf_filter/gtf_filter"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/gtf_filter/gtf_filter

@@ -470,8 +470,8 @@ function ViashDockerfile {
 FROM python:latest
 ENTRYPOINT []
 LABEL org.opencontainers.image.description="Companion container for running component gtf_filter"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:23Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:29Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/gunzip/.config.vsh.yaml

@@ -145,7 +145,7 @@ build_info:
   executable: "target/executable/gunzip/gunzip"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/gunzip/gunzip

@@ -466,8 +466,8 @@ RUN apt-get update && \
   rm -rf /var/lib/apt/lists/*
 
 LABEL org.opencontainers.image.description="Companion container for running component gunzip"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:07Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:14Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/kallisto/kallisto_index/.config.vsh.yaml

@@ -156,7 +156,7 @@ build_info:
   executable: "target/executable/kallisto/kallisto_index/kallisto_index"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/kallisto/kallisto_index/kallisto_index

@@ -471,8 +471,8 @@ tar -xzf kallisto_linux-v0.50.1.tar.gz && \
 mv kallisto/kallisto /usr/local/bin/
 
 LABEL org.opencontainers.image.description="Companion container for running component kallisto kallisto_index"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:22Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:28Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/kallisto/kallisto_quant/.config.vsh.yaml

@@ -254,7 +254,7 @@ build_info:
   executable: "target/executable/kallisto/kallisto_quant/kallisto_quant"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/kallisto/kallisto_quant/kallisto_quant

@@ -515,8 +515,8 @@ tar -xzf kallisto_linux-v0.50.1.tar.gz && \
 mv kallisto/kallisto /usr/local/bin/
 
 LABEL org.opencontainers.image.description="Companion container for running component kallisto kallisto_quant"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:21Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:27Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/multiqc_custom_biotype/.config.vsh.yaml

@@ -174,7 +174,7 @@ build_info:
   executable: "target/executable/multiqc_custom_biotype/multiqc_custom_biotype"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/multiqc_custom_biotype/multiqc_custom_biotype

@@ -481,8 +481,8 @@ RUN apt-get update && \
 RUN pip install --upgrade pip
 
 LABEL org.opencontainers.image.description="Companion container for running component multiqc_custom_biotype"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:15Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:22Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/picard_markduplicates/.config.vsh.yaml

@@ -208,7 +208,7 @@ build_info:
   executable: "target/executable/picard_markduplicates/picard_markduplicates"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/picard_markduplicates/picard_markduplicates

@@ -494,8 +494,8 @@ wget --no-check-certificate https://github.com/broadinstitute/picard/releases/do
 mv picard.jar /usr/local/bin 
 
 LABEL org.opencontainers.image.description="Companion container for running component picard_markduplicates"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:24Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:30Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/prepare_multiqc_input/.config.vsh.yaml

@@ -410,7 +410,7 @@ build_info:
   executable: "target/executable/prepare_multiqc_input/prepare_multiqc_input"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/prepare_multiqc_input/prepare_multiqc_input

@@ -557,8 +557,8 @@ function ViashDockerfile {
 FROM ubuntu:22.04
 ENTRYPOINT []
 LABEL org.opencontainers.image.description="Companion container for running component prepare_multiqc_input"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:19Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:25Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/preprocess_transcripts_fasta/.config.vsh.yaml

@@ -139,7 +139,7 @@ build_info:
   executable: "target/executable/preprocess_transcripts_fasta/preprocess_transcripts_fasta"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/preprocess_transcripts_fasta/preprocess_transcripts_fasta

@@ -462,8 +462,8 @@ function ViashDockerfile {
 FROM ubuntu:22.04
 ENTRYPOINT []
 LABEL org.opencontainers.image.description="Companion container for running component preprocess_transcripts_fasta"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:19Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:25Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/preseq_lcextrap/.config.vsh.yaml

@@ -192,7 +192,7 @@ build_info:
   executable: "target/executable/preseq_lcextrap/preseq_lcextrap"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/preseq_lcextrap/preseq_lcextrap

@@ -495,8 +495,8 @@ mkdir build && cd build && \
 make && make install && make HAVE_HTSLIB=1 all 
 
 LABEL org.opencontainers.image.description="Companion container for running component preseq_lcextrap"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:07Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:15Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/qualimap/.config.vsh.yaml

@@ -272,7 +272,7 @@ build_info:
   executable: "target/executable/qualimap/qualimap"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/qualimap/qualimap

@@ -537,8 +537,8 @@ RUN Rscript -e 'if (!requireNamespace("remotes", quietly = TRUE)) install.packag
   Rscript -e 'remotes::install_cran(c("optparse"), repos = "https://cran.rstudio.com")'
 
 LABEL org.opencontainers.image.description="Companion container for running component qualimap"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:06Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:12Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/rsem/rsem_calculate_expression/.config.vsh.yaml

@@ -300,7 +300,7 @@ build_info:
   executable: "target/executable/rsem/rsem_calculate_expression/rsem_calculate_expression"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/rsem/rsem_calculate_expression/rsem_calculate_expression

@@ -542,8 +542,8 @@ echo 'export PATH=$PATH:/usr/local/bin' >> ~/.bashrc && \
 /bin/bash -c "source /etc/profile && source ~/.bashrc && echo $PATH && which STAR"
 
 LABEL org.opencontainers.image.description="Companion container for running component rsem rsem_calculate_expression"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:21Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:27Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/rsem/rsem_merge_counts/.config.vsh.yaml

@@ -183,7 +183,7 @@ build_info:
   executable: "target/executable/rsem/rsem_merge_counts/rsem_merge_counts"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/rsem/rsem_merge_counts/rsem_merge_counts

@@ -483,8 +483,8 @@ function ViashDockerfile {
 FROM ubuntu:22.04
 ENTRYPOINT []
 LABEL org.opencontainers.image.description="Companion container for running component rsem rsem_merge_counts"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:21Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:27Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/rseqc/rseqc_bamstat/.config.vsh.yaml

@@ -164,7 +164,7 @@ build_info:
   executable: "target/executable/rseqc/rseqc_bamstat/rseqc_bamstat"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/rseqc/rseqc_bamstat/rseqc_bamstat

@@ -477,8 +477,8 @@ RUN pip install --upgrade pip && \
   pip install --upgrade --no-cache-dir "RSeQC"
 
 LABEL org.opencontainers.image.description="Companion container for running component rseqc rseqc_bamstat"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:18Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:24Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/rseqc/rseqc_inferexperiment/.config.vsh.yaml

@@ -187,7 +187,7 @@ build_info:
   executable: "target/executable/rseqc/rseqc_inferexperiment/rseqc_inferexperiment"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/rseqc/rseqc_inferexperiment/rseqc_inferexperiment

@@ -487,8 +487,8 @@ RUN pip install --upgrade pip && \
   pip install --upgrade --no-cache-dir "RSeQC"
 
 LABEL org.opencontainers.image.description="Companion container for running component rseqc rseqc_inferexperiment"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:15Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:22Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/rseqc/rseqc_innerdistance/.config.vsh.yaml

@@ -273,7 +273,7 @@ build_info:
   executable: "target/executable/rseqc/rseqc_innerdistance/rseqc_innerdistance"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/rseqc/rseqc_innerdistance/rseqc_innerdistance

@@ -529,8 +529,8 @@ RUN pip install --upgrade pip && \
   pip install --upgrade --no-cache-dir "RSeQC"
 
 LABEL org.opencontainers.image.description="Companion container for running component rseqc rseqc_innerdistance"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:18Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:24Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/rseqc/rseqc_junctionannotation/.config.vsh.yaml

@@ -261,7 +261,7 @@ build_info:
   executable: "target/executable/rseqc/rseqc_junctionannotation/rseqc_junctionannotation"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/rseqc/rseqc_junctionannotation/rseqc_junctionannotation

@@ -519,8 +519,8 @@ RUN pip install --upgrade pip && \
   pip install --upgrade --no-cache-dir "RSeQC"
 
 LABEL org.opencontainers.image.description="Companion container for running component rseqc rseqc_junctionannotation"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:17Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:24Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/rseqc/rseqc_junctionsaturation/.config.vsh.yaml

@@ -250,7 +250,7 @@ build_info:
   executable: "target/executable/rseqc/rseqc_junctionsaturation/rseqc_junctionsaturation"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/rseqc/rseqc_junctionsaturation/rseqc_junctionsaturation

@@ -522,8 +522,8 @@ RUN pip install --upgrade pip && \
   pip install --upgrade --no-cache-dir "RSeQC"
 
 LABEL org.opencontainers.image.description="Companion container for running component rseqc rseqc_junctionsaturation"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:17Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:23Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/rseqc/rseqc_readdistribution/.config.vsh.yaml

@@ -163,7 +163,7 @@ build_info:
   executable: "target/executable/rseqc/rseqc_readdistribution/rseqc_readdistribution"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/rseqc/rseqc_readdistribution/rseqc_readdistribution

@@ -474,8 +474,8 @@ RUN pip install --upgrade pip && \
   pip install --upgrade --no-cache-dir "RSeQC"
 
 LABEL org.opencontainers.image.description="Companion container for running component rseqc rseqc_readdistribution"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:18Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:25Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/rseqc/rseqc_readduplication/.config.vsh.yaml

@@ -212,7 +212,7 @@ build_info:
   executable: "target/executable/rseqc/rseqc_readduplication/rseqc_readduplication"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/rseqc/rseqc_readduplication/rseqc_readduplication

@@ -499,8 +499,8 @@ RUN pip install --upgrade pip && \
   pip install --upgrade --no-cache-dir "RSeQC"
 
 LABEL org.opencontainers.image.description="Companion container for running component rseqc rseqc_readduplication"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:16Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:23Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/rseqc/rseqc_tin/.config.vsh.yaml

@@ -215,7 +215,7 @@ build_info:
   executable: "target/executable/rseqc/rseqc_tin/rseqc_tin"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/rseqc/rseqc_tin/rseqc_tin

@@ -501,8 +501,8 @@ RUN apt-get update && \
 RUN pip3 install RSeQC
 
 LABEL org.opencontainers.image.description="Companion container for running component rseqc rseqc_tin"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:16Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:23Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/sortmerna/.config.vsh.yaml

@@ -199,7 +199,7 @@ build_info:
   executable: "target/executable/sortmerna/sortmerna"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/sortmerna/sortmerna

@@ -492,8 +492,8 @@ wget --no-check-certificate https://github.com/sortmerna/sortmerna/releases/down
 bash sortmerna-4.3.6-Linux.sh --skip-license
 
 LABEL org.opencontainers.image.description="Companion container for running component sortmerna"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:23Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:29Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/stringtie/.config.vsh.yaml

@@ -217,7 +217,7 @@ build_info:
   executable: "target/executable/stringtie/stringtie"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/stringtie/stringtie

@@ -496,8 +496,8 @@ tar -xzf stringtie-2.2.1.Linux_x86_64.tar.gz && \
 cp stringtie-2.2.1.Linux_x86_64/stringtie /usr/local/bin/
 
 LABEL org.opencontainers.image.description="Companion container for running component stringtie"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:20Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:26Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/summarizedexperiment/.config.vsh.yaml

@@ -200,7 +200,7 @@ build_info:
   executable: "target/executable/summarizedexperiment/summarizedexperiment"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/summarizedexperiment/summarizedexperiment

@@ -487,8 +487,8 @@ RUN Rscript -e 'if (!requireNamespace("BiocManager", quietly = TRUE)) install.pa
   Rscript -e 'if (!requireNamespace("tximeta", quietly = TRUE)) BiocManager::install("tximeta")'
 
 LABEL org.opencontainers.image.description="Companion container for running component summarizedexperiment"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:24Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:30Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/trimgalore/.config.vsh.yaml

@@ -789,7 +789,7 @@ build_info:
   executable: "target/executable/trimgalore/trimgalore"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/trimgalore/trimgalore

@@ -858,7 +858,7 @@ ENTRYPOINT []
 RUN echo "TrimGalore: `trim_galore --version | sed -n 's/.*version\s\+\([0-9]\+\.[0-9]\+\.[0-9]\+\).*/\1/p'`" > /var/software_versions.txt
 
 LABEL org.opencontainers.image.description="Companion container for running component trimgalore"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:23Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:29Z"
 LABEL org.opencontainers.image.source="https://github.com/FelixKrueger/TrimGalore"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"

target/executable/tx2gene/.config.vsh.yaml

@@ -193,7 +193,7 @@ build_info:
   executable: "target/executable/tx2gene/tx2gene"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/tx2gene/tx2gene

@@ -487,8 +487,8 @@ RUN apt-get update && \
 RUN pip install --upgrade pip
 
 LABEL org.opencontainers.image.description="Companion container for running component tx2gene"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:20Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:26Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/tximport/.config.vsh.yaml

@@ -248,7 +248,7 @@ build_info:
   executable: "target/executable/tximport/tximport"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/tximport/tximport

@@ -508,8 +508,8 @@ RUN Rscript -e 'if (!requireNamespace("remotes", quietly = TRUE)) install.packag
   Rscript -e 'remotes::install_cran(c("jsonlite"), repos = "https://cran.rstudio.com")'
 
 LABEL org.opencontainers.image.description="Companion container for running component tximport"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:12Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:20Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/ucsc/bedclip/.config.vsh.yaml

@@ -165,7 +165,7 @@ build_info:
   executable: "target/executable/ucsc/bedclip/bedclip"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/ucsc/bedclip/bedclip

@@ -473,8 +473,8 @@ RUN apt-get update && \
 RUN rsync -aP rsync://hgdownload.soe.ucsc.edu/genome/admin/exe/linux.x86_64/bedClip /usr/local/bin/
 
 LABEL org.opencontainers.image.description="Companion container for running component ucsc bedclip"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:13Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:21Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/ucsc/bedgraphtobigwig/.config.vsh.yaml

@@ -165,7 +165,7 @@ build_info:
   executable: "target/executable/ucsc/bedgraphtobigwig/bedgraphtobigwig"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/ucsc/bedgraphtobigwig/bedgraphtobigwig

@@ -473,8 +473,8 @@ RUN apt-get update && \
 RUN rsync -aP rsync://hgdownload.soe.ucsc.edu/genome/admin/exe/linux.x86_64/bedGraphToBigWig /usr/local/bin/
 
 LABEL org.opencontainers.image.description="Companion container for running component ucsc bedgraphtobigwig"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:14Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:21Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/umitools/umitools_dedup/.config.vsh.yaml

@@ -196,7 +196,7 @@ build_info:
   executable: "target/executable/umitools/umitools_dedup/umitools_dedup"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/umitools/umitools_dedup/umitools_dedup

@@ -489,8 +489,8 @@ RUN pip install --upgrade pip && \
   pip install --upgrade --no-cache-dir "umi_tools"
 
 LABEL org.opencontainers.image.description="Companion container for running component umitools umitools_dedup"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:22Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:28Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/umitools/umitools_extract/.config.vsh.yaml

@@ -254,7 +254,7 @@ build_info:
   executable: "target/executable/umitools/umitools_extract/umitools_extract"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/umitools/umitools_extract/umitools_extract

@@ -521,8 +521,8 @@ RUN pip install --upgrade pip && \
   pip install --upgrade --no-cache-dir "umi_tools"
 
 LABEL org.opencontainers.image.description="Companion container for running component umitools umitools_extract"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:22Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:28Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/umitools_prepareforquant/.config.vsh.yaml

@@ -157,7 +157,7 @@ build_info:
   executable: "target/executable/umitools_prepareforquant/umitools_prepareforquant"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/executable/umitools_prepareforquant/umitools_prepareforquant

@@ -473,8 +473,8 @@ RUN pip install --upgrade pip && \
   pip install --upgrade --no-cache-dir "umi_tools" "pysam"
 
 LABEL org.opencontainers.image.description="Companion container for running component umitools_prepareforquant"
-LABEL org.opencontainers.image.created="2024-10-03T15:52:24Z"
+LABEL org.opencontainers.image.created="2024-10-04T07:06:30Z"
-LABEL org.opencontainers.image.source="https://x-access-token/ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+LABEL org.opencontainers.image.source="https://x-access-token/ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 LABEL org.opencontainers.image.revision="fd0354dae813d953b107e8fa856f3cd4e7939f2b"
 LABEL org.opencontainers.image.version="main"
 

target/executable/workflows/genome_alignment_and_quant/.config.vsh.yaml

@@ -604,7 +604,7 @@ build_info:
   executable: "target/executable/workflows/genome_alignment_and_quant/genome_alignment_and_quant"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
   dependencies:
   - "target/dependencies/vsh/vsh/biobox/v0.2.0/nextflow/star/star_align_reads"
   - "target/dependencies/vsh/vsh/biobox/v0.2.0/nextflow/samtools/samtools_sort"

target/executable/workflows/merge_quant_results/.config.vsh.yaml

@@ -279,7 +279,7 @@ build_info:
   executable: "target/executable/workflows/merge_quant_results/merge_quant_results"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
   dependencies:
   - "target/nextflow/tx2gene"
   - "target/nextflow/tximport"

target/executable/workflows/post_processing/.config.vsh.yaml

@@ -487,7 +487,7 @@ build_info:
   executable: "target/executable/workflows/post_processing/post_processing"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
   dependencies:
   - "target/nextflow/picard_markduplicates"
   - "target/dependencies/vsh/vsh/biobox/v0.2.0/nextflow/samtools/samtools_sort"

target/executable/workflows/pre_processing/.config.vsh.yaml

@@ -674,7 +674,7 @@ build_info:
   executable: "target/executable/workflows/pre_processing/pre_processing"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
   dependencies:
   - "target/nextflow/fastqc"
   - "target/nextflow/umitools/umitools_extract"

target/executable/workflows/prepare_genome/.config.vsh.yaml

@@ -497,7 +497,7 @@ build_info:
   executable: "target/executable/workflows/prepare_genome/prepare_genome"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
   dependencies:
   - "target/nextflow/gunzip"
   - "target/dependencies/vsh/vsh/biobox/v0.2.0/nextflow/gffread"

target/executable/workflows/pseudo_alignment_and_quant/.config.vsh.yaml

@@ -284,7 +284,7 @@ build_info:
   executable: "target/executable/workflows/pseudo_alignment_and_quant/pseudo_alignment_and_quant"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
   dependencies:
   - "target/dependencies/vsh/vsh/biobox/v0.2.0/nextflow/salmon/salmon_quant"
   - "target/nextflow/kallisto/kallisto_quant"

target/executable/workflows/quality_control/.config.vsh.yaml

@@ -1597,7 +1597,7 @@ build_info:
   executable: "target/executable/workflows/quality_control/quality_control"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
   dependencies:
   - "target/nextflow/rseqc/rseqc_bamstat"
   - "target/nextflow/rseqc/rseqc_inferexperiment"

target/executable/workflows/rnaseq/.config.vsh.yaml

@@ -2118,7 +2118,7 @@ build_info:
   executable: "target/executable/workflows/rnaseq/rnaseq"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
   dependencies:
   - "target/nextflow/workflows/prepare_genome"
   - "target/nextflow/cat_fastq"

target/nextflow/bbmap_bbsplit/.config.vsh.yaml

@@ -239,7 +239,7 @@ build_info:
   executable: "target/nextflow/bbmap_bbsplit/main.nf"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/nextflow/bbmap_bbsplit/main.nf

@@ -3105,7 +3105,7 @@ meta = [
     "output" : "/workdir/root/repo/target/nextflow/bbmap_bbsplit",
     "viash_version" : "0.9.0",
     "git_commit" : "fd0354dae813d953b107e8fa856f3cd4e7939f2b",
-    "git_remote" : "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+    "git_remote" : "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
   },
   "package_config" : {
     "version" : "main",

target/nextflow/bedtools_genomecov/.config.vsh.yaml

@@ -179,7 +179,7 @@ build_info:
   executable: "target/nextflow/bedtools_genomecov/main.nf"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/nextflow/bedtools_genomecov/main.nf

@@ -3032,7 +3032,7 @@ meta = [
     "output" : "/workdir/root/repo/target/nextflow/bedtools_genomecov",
     "viash_version" : "0.9.0",
     "git_commit" : "fd0354dae813d953b107e8fa856f3cd4e7939f2b",
-    "git_remote" : "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+    "git_remote" : "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
   },
   "package_config" : {
     "version" : "main",

target/nextflow/cat_additional_fasta/.config.vsh.yaml

@@ -183,7 +183,7 @@ build_info:
   executable: "target/nextflow/cat_additional_fasta/main.nf"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/nextflow/cat_additional_fasta/main.nf

@@ -3033,7 +3033,7 @@ meta = [
     "output" : "/workdir/root/repo/target/nextflow/cat_additional_fasta",
     "viash_version" : "0.9.0",
     "git_commit" : "fd0354dae813d953b107e8fa856f3cd4e7939f2b",
-    "git_remote" : "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+    "git_remote" : "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
   },
   "package_config" : {
     "version" : "main",

target/nextflow/cat_fastq/.config.vsh.yaml

@@ -170,7 +170,7 @@ build_info:
   executable: "target/nextflow/cat_fastq/main.nf"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/nextflow/cat_fastq/main.nf

@@ -3024,7 +3024,7 @@ meta = [
     "output" : "/workdir/root/repo/target/nextflow/cat_fastq",
     "viash_version" : "0.9.0",
     "git_commit" : "fd0354dae813d953b107e8fa856f3cd4e7939f2b",
-    "git_remote" : "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+    "git_remote" : "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
   },
   "package_config" : {
     "version" : "main",

target/nextflow/deseq2_qc/.config.vsh.yaml

@@ -240,7 +240,7 @@ build_info:
   executable: "target/nextflow/deseq2_qc/main.nf"
   viash_version: "0.9.0"
   git_commit: "fd0354dae813d953b107e8fa856f3cd4e7939f2b"
-  git_remote: "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+  git_remote: "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
 package_config:
   version: "main"
   info:

target/nextflow/deseq2_qc/main.nf

@@ -3113,7 +3113,7 @@ meta = [
     "output" : "/workdir/root/repo/target/nextflow/deseq2_qc",
     "viash_version" : "0.9.0",
     "git_commit" : "fd0354dae813d953b107e8fa856f3cd4e7939f2b",
-    "git_remote" : "https://x-access-token:ghs_PTWjrDyiP6F8xJddYWNdkyLhIv0ZGM1AEXAG@github.com/viash-hub/rnaseq"
+    "git_remote" : "https://x-access-token:ghs_qP68SGVqiugFlLowIn73iXH8gzJeuD4MgS5A@github.com/viash-hub/rnaseq"
   },
   "package_config" : {
     "version" : "main",