Build branch main with version main (cb9b328)
Build pipeline: viash-hub.rnaseq.main-mf5kg
Source commit: cb9b328834
Source message: Update pointers to biobox and craftbox
This commit is contained in:
@@ -197,7 +197,7 @@ dependencies:
|
||||
repository:
|
||||
type: "vsh"
|
||||
repo: "vsh/biobox"
|
||||
tag: "v0.1"
|
||||
tag: "v0.2.0"
|
||||
- name: "kallisto/kallisto_quant"
|
||||
repository:
|
||||
type: "local"
|
||||
@@ -205,7 +205,7 @@ repositories:
|
||||
- type: "vsh"
|
||||
name: "biobox"
|
||||
repo: "vsh/biobox"
|
||||
tag: "v0.1"
|
||||
tag: "v0.2.0"
|
||||
runners:
|
||||
- type: "executable"
|
||||
id: "executable"
|
||||
@@ -281,10 +281,10 @@ build_info:
|
||||
output: "target/executable/workflows/pseudo_alignment_and_quant"
|
||||
executable: "target/executable/workflows/pseudo_alignment_and_quant/pseudo_alignment_and_quant"
|
||||
viash_version: "0.9.0"
|
||||
git_commit: "1e1ffb315fefec05db2ee0c62e1c98ce4b49929c"
|
||||
git_commit: "cb9b32883494c48f394213551a82e9103f2e620c"
|
||||
git_remote: "https://github.com/viash-hub/rnaseq"
|
||||
dependencies:
|
||||
- "target/dependencies/vsh/vsh/biobox/v0.1/nextflow/salmon/salmon_quant"
|
||||
- "target/dependencies/vsh/vsh/biobox/v0.2.0/nextflow/salmon/salmon_quant"
|
||||
- "target/nextflow/kallisto/kallisto_quant"
|
||||
package_config:
|
||||
version: "main"
|
||||
|
||||
@@ -784,7 +784,7 @@ fi
|
||||
|
||||
# set dependency paths
|
||||
VIASH_DEP_KALLISTO_KALLISTO_QUANT="$VIASH_META_RESOURCES_DIR/../../../nextflow/kallisto/kallisto_quant/main.nf"
|
||||
VIASH_DEP_SALMON_SALMON_QUANT="$VIASH_TARGET_DIR/dependencies/vsh/vsh/biobox/v0.1/nextflow/salmon/salmon_quant/main.nf"
|
||||
VIASH_DEP_SALMON_SALMON_QUANT="$VIASH_TARGET_DIR/dependencies/vsh/vsh/biobox/v0.2.0/nextflow/salmon/salmon_quant/main.nf"
|
||||
|
||||
ViashDebug "Running command: $(echo $VIASH_CMD)"
|
||||
cat << VIASHEOF | eval $VIASH_CMD
|
||||
|
||||
Reference in New Issue
Block a user