Build pipeline: vsh-ci-dev-jsbwk
Source commit: 1e1ffb315f
Source message: Merge pull request #17 from viash-hub/add_biobox_modules
- Migrate a number of components to biobox
- Fix tests
- Reduce size of test resources
- Prepare for Viash Hub
28 lines
535 B
Plaintext
28 lines
535 B
Plaintext
// template nextflow.config for nested workflows
|
|
|
|
manifest {
|
|
nextflowVersion = '!>=20.12.1-edge'
|
|
}
|
|
|
|
docker {
|
|
fixOwnership = true
|
|
}
|
|
|
|
|
|
// TODO 1: unquote and adapt `rootDir` according to relative path within project
|
|
// params {
|
|
// rootDir = "$projectDir/../.."
|
|
// }
|
|
//
|
|
// workflowDir = "${params.rootDir}/workflows"
|
|
// targetDir = "${params.rootDir}/target/nextflow"
|
|
|
|
// TODO 2: insert custom imports here
|
|
|
|
// TODO 3: unquote
|
|
// docker {
|
|
// runOptions = "-v \$(realpath ${params.rootDir}):\$(realpath ${params.rootDir})"
|
|
// }
|
|
|
|
|