CI 9b29e37466 Build branch main with version main (64aad6a) ...

Build pipeline: viash-hub.rnaseq.main-4gbdz

Source commit: 64aad6a006

Source message: Merge pull request #22 from viash-hub/define_repositories_in_package_config

define dependency repositories once in the package config

2024-09-14 09:49:51 +00:00

..

bbmap_bbsplit

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

bedtools_genomecov

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

cat_additional_fasta

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

cat_fastq

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

deseq2_qc

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

dupradar

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

fastqc

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

fq_subsample

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

getchromsizes

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

gtf2bed

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

gtf_filter

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

gunzip

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

kallisto

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

multiqc_custom_biotype

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

picard_markduplicates

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

prepare_multiqc_input

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

preprocess_transcripts_fasta

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

preseq_lcextrap

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

qualimap

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

rsem

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

rseqc

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

sortmerna

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

stringtie

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

summarizedexperiment

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

trimgalore

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

tx2gene

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

tximport

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

ucsc

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

umitools

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

umitools_prepareforquant

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00

workflows

Build branch main with version main (64aad6a)

2024-09-14 09:49:51 +00:00