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Build branch main with version main (f91567d)

Browse Source 
Build pipeline: viash-hub.biobox.main-cc5jz

Source commit: f91567d467

Source message: add outdir argument (#181)

* add outdir argument

* added tests, small changes

* update example outdir
This commit is contained in:
CI
2025-06-24 10:57:17 +00:00
parent 71f1661df8
commit 9cc17eaa6f
341 changed files with 923 additions and 726 deletions
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4
target/nextflow/bcftools/bcftools_annotate/.config.vsh.yaml
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@@ -468,9 +468,9 @@ build_info:
output: "target/nextflow/bcftools/bcftools_annotate"
executable: "target/nextflow/bcftools/bcftools_annotate/main.nf"
viash_version: "0.9.4"
git_commit: "219ba1d3d0d7fbc66393595534bb6c333b08b238"
git_commit: "f91567d467e6be79a5f71b24a54864ab13bdd278"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-37-g219ba1d"
git_tag: "v0.2.0-38-gf91567d"
package_config:
name: "biobox"
version: "main"

4
target/nextflow/bcftools/bcftools_annotate/main.nf
View File

@@ -3558,9 +3558,9 @@ meta = [
"engine" : "docker|native",
"output" : "target/nextflow/bcftools/bcftools_annotate",
"viash_version" : "0.9.4",
"git_commit" : "219ba1d3d0d7fbc66393595534bb6c333b08b238",
"git_commit" : "f91567d467e6be79a5f71b24a54864ab13bdd278",
"git_remote" : "https://github.com/viash-hub/biobox",
"git_tag" : "v0.2.0-37-g219ba1d"
"git_tag" : "v0.2.0-38-gf91567d"
},
"package_config" : {
"name" : "biobox",

4
target/nextflow/bcftools/bcftools_concat/.config.vsh.yaml
View File

@@ -334,9 +334,9 @@ build_info:
output: "target/nextflow/bcftools/bcftools_concat"
executable: "target/nextflow/bcftools/bcftools_concat/main.nf"
viash_version: "0.9.4"
git_commit: "219ba1d3d0d7fbc66393595534bb6c333b08b238"
git_commit: "f91567d467e6be79a5f71b24a54864ab13bdd278"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-37-g219ba1d"
git_tag: "v0.2.0-38-gf91567d"
package_config:
name: "biobox"
version: "main"

4
target/nextflow/bcftools/bcftools_concat/main.nf
View File

@@ -3430,9 +3430,9 @@ meta = [
"engine" : "docker|native",
"output" : "target/nextflow/bcftools/bcftools_concat",
"viash_version" : "0.9.4",
"git_commit" : "219ba1d3d0d7fbc66393595534bb6c333b08b238",
"git_commit" : "f91567d467e6be79a5f71b24a54864ab13bdd278",
"git_remote" : "https://github.com/viash-hub/biobox",
"git_tag" : "v0.2.0-37-g219ba1d"
"git_tag" : "v0.2.0-38-gf91567d"
},
"package_config" : {
"name" : "biobox",

4
target/nextflow/bcftools/bcftools_norm/.config.vsh.yaml
View File

@@ -415,9 +415,9 @@ build_info:
output: "target/nextflow/bcftools/bcftools_norm"
executable: "target/nextflow/bcftools/bcftools_norm/main.nf"
viash_version: "0.9.4"
git_commit: "219ba1d3d0d7fbc66393595534bb6c333b08b238"
git_commit: "f91567d467e6be79a5f71b24a54864ab13bdd278"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-37-g219ba1d"
git_tag: "v0.2.0-38-gf91567d"
package_config:
name: "biobox"
version: "main"

4
target/nextflow/bcftools/bcftools_norm/main.nf
View File

@@ -3523,9 +3523,9 @@ meta = [
"engine" : "docker|native",
"output" : "target/nextflow/bcftools/bcftools_norm",
"viash_version" : "0.9.4",
"git_commit" : "219ba1d3d0d7fbc66393595534bb6c333b08b238",
"git_commit" : "f91567d467e6be79a5f71b24a54864ab13bdd278",
"git_remote" : "https://github.com/viash-hub/biobox",
"git_tag" : "v0.2.0-37-g219ba1d"
"git_tag" : "v0.2.0-38-gf91567d"
},
"package_config" : {
"name" : "biobox",

4
target/nextflow/bcftools/bcftools_sort/.config.vsh.yaml
View File

@@ -184,9 +184,9 @@ build_info:
output: "target/nextflow/bcftools/bcftools_sort"
executable: "target/nextflow/bcftools/bcftools_sort/main.nf"
viash_version: "0.9.4"
git_commit: "219ba1d3d0d7fbc66393595534bb6c333b08b238"
git_commit: "f91567d467e6be79a5f71b24a54864ab13bdd278"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-37-g219ba1d"
git_tag: "v0.2.0-38-gf91567d"
package_config:
name: "biobox"
version: "main"

4
target/nextflow/bcftools/bcftools_sort/main.nf
View File

@@ -3271,9 +3271,9 @@ meta = [
"engine" : "docker|native",
"output" : "target/nextflow/bcftools/bcftools_sort",
"viash_version" : "0.9.4",
"git_commit" : "219ba1d3d0d7fbc66393595534bb6c333b08b238",
"git_commit" : "f91567d467e6be79a5f71b24a54864ab13bdd278",
"git_remote" : "https://github.com/viash-hub/biobox",
"git_tag" : "v0.2.0-37-g219ba1d"
"git_tag" : "v0.2.0-38-gf91567d"
},
"package_config" : {
"name" : "biobox",

4
target/nextflow/bcftools/bcftools_stats/.config.vsh.yaml
View File

@@ -457,9 +457,9 @@ build_info:
output: "target/nextflow/bcftools/bcftools_stats"
executable: "target/nextflow/bcftools/bcftools_stats/main.nf"
viash_version: "0.9.4"
git_commit: "219ba1d3d0d7fbc66393595534bb6c333b08b238"
git_commit: "f91567d467e6be79a5f71b24a54864ab13bdd278"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-37-g219ba1d"
git_tag: "v0.2.0-38-gf91567d"
package_config:
name: "biobox"
version: "main"

4
target/nextflow/bcftools/bcftools_stats/main.nf
View File

@@ -3560,9 +3560,9 @@ meta = [
"engine" : "docker|native",
"output" : "target/nextflow/bcftools/bcftools_stats",
"viash_version" : "0.9.4",
"git_commit" : "219ba1d3d0d7fbc66393595534bb6c333b08b238",
"git_commit" : "f91567d467e6be79a5f71b24a54864ab13bdd278",
"git_remote" : "https://github.com/viash-hub/biobox",
"git_tag" : "v0.2.0-37-g219ba1d"
"git_tag" : "v0.2.0-38-gf91567d"
},
"package_config" : {
"name" : "biobox",