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Build branch main with version main (c733de2)

Browse Source 
Build pipeline: viash-hub.biobox.main-lltcw

Source commit: c733de2e4c

Source message: Bump viash to 0.9.4 (#175)

* Bump viash to 0.9.4

* Add CHANGELOG entry

* Add PR number
This commit is contained in:
CI
2025-04-30 07:01:27 +00:00
parent 963503eca8
commit af7bcfffa4
376 changed files with 5766 additions and 4468 deletions
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8
target/executable/bcftools/bcftools_annotate/.config.vsh.yaml
View File

@@ -471,16 +471,16 @@ build_info:
engine: "docker|native"
output: "target/executable/bcftools/bcftools_annotate"
executable: "target/executable/bcftools/bcftools_annotate/bcftools_annotate"
viash_version: "0.9.2"
git_commit: "1efc0264ca674d8cff7729fcd0ad8f11ea06ee27"
viash_version: "0.9.4"
git_commit: "c733de2e4cc21eccb241060f82bce0b332f79d81"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-31-g1efc026"
git_tag: "v0.2.0-32-gc733de2"
package_config:
name: "biobox"
version: "main"
description: "A collection of bioinformatics tools for working with sequence data.\n"
info: null
viash_version: "0.9.2"
viash_version: "0.9.4"
source: "src"
target: "target"
config_mods:

6
target/executable/bcftools/bcftools_annotate/bcftools_annotate
View File

@@ -2,7 +2,7 @@
# bcftools_annotate main
#
# This wrapper script is auto-generated by viash 0.9.2 and is thus a derivative
# This wrapper script is auto-generated by viash 0.9.4 and is thus a derivative
# work thereof. This software comes with ABSOLUTELY NO WARRANTY from Data
# Intuitive.
#
@@ -456,9 +456,9 @@ RUN echo "bcftools: \"$(bcftools --version | grep 'bcftools' | sed -n 's/^bcftoo
LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
LABEL org.opencontainers.image.description="Companion container for running component bcftools bcftools_annotate"
LABEL org.opencontainers.image.created="2025-04-22T08:55:17Z"
LABEL org.opencontainers.image.created="2025-04-29T10:54:43Z"
LABEL org.opencontainers.image.source="https://github.com/samtools/bcftools"
LABEL org.opencontainers.image.revision="1efc0264ca674d8cff7729fcd0ad8f11ea06ee27"
LABEL org.opencontainers.image.revision="c733de2e4cc21eccb241060f82bce0b332f79d81"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER

8
target/executable/bcftools/bcftools_concat/.config.vsh.yaml
View File

@@ -337,16 +337,16 @@ build_info:
engine: "docker|native"
output: "target/executable/bcftools/bcftools_concat"
executable: "target/executable/bcftools/bcftools_concat/bcftools_concat"
viash_version: "0.9.2"
git_commit: "1efc0264ca674d8cff7729fcd0ad8f11ea06ee27"
viash_version: "0.9.4"
git_commit: "c733de2e4cc21eccb241060f82bce0b332f79d81"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-31-g1efc026"
git_tag: "v0.2.0-32-gc733de2"
package_config:
name: "biobox"
version: "main"
description: "A collection of bioinformatics tools for working with sequence data.\n"
info: null
viash_version: "0.9.2"
viash_version: "0.9.4"
source: "src"
target: "target"
config_mods:

6
target/executable/bcftools/bcftools_concat/bcftools_concat
View File

@@ -2,7 +2,7 @@
# bcftools_concat main
#
# This wrapper script is auto-generated by viash 0.9.2 and is thus a derivative
# This wrapper script is auto-generated by viash 0.9.4 and is thus a derivative
# work thereof. This software comes with ABSOLUTELY NO WARRANTY from Data
# Intuitive.
#
@@ -456,9 +456,9 @@ RUN echo "bcftools: \"$(bcftools --version | grep 'bcftools' | sed -n 's/^bcftoo
LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
LABEL org.opencontainers.image.description="Companion container for running component bcftools bcftools_concat"
LABEL org.opencontainers.image.created="2025-04-22T08:55:17Z"
LABEL org.opencontainers.image.created="2025-04-29T10:54:42Z"
LABEL org.opencontainers.image.source="https://github.com/samtools/bcftools"
LABEL org.opencontainers.image.revision="1efc0264ca674d8cff7729fcd0ad8f11ea06ee27"
LABEL org.opencontainers.image.revision="c733de2e4cc21eccb241060f82bce0b332f79d81"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER

8
target/executable/bcftools/bcftools_norm/.config.vsh.yaml
View File

@@ -418,16 +418,16 @@ build_info:
engine: "docker|native"
output: "target/executable/bcftools/bcftools_norm"
executable: "target/executable/bcftools/bcftools_norm/bcftools_norm"
viash_version: "0.9.2"
git_commit: "1efc0264ca674d8cff7729fcd0ad8f11ea06ee27"
viash_version: "0.9.4"
git_commit: "c733de2e4cc21eccb241060f82bce0b332f79d81"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-31-g1efc026"
git_tag: "v0.2.0-32-gc733de2"
package_config:
name: "biobox"
version: "main"
description: "A collection of bioinformatics tools for working with sequence data.\n"
info: null
viash_version: "0.9.2"
viash_version: "0.9.4"
source: "src"
target: "target"
config_mods:

6
target/executable/bcftools/bcftools_norm/bcftools_norm
View File

@@ -2,7 +2,7 @@
# bcftools_norm main
#
# This wrapper script is auto-generated by viash 0.9.2 and is thus a derivative
# This wrapper script is auto-generated by viash 0.9.4 and is thus a derivative
# work thereof. This software comes with ABSOLUTELY NO WARRANTY from Data
# Intuitive.
#
@@ -456,9 +456,9 @@ RUN echo "bcftools: \"$(bcftools --version | grep 'bcftools' | sed -n 's/^bcftoo
LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
LABEL org.opencontainers.image.description="Companion container for running component bcftools bcftools_norm"
LABEL org.opencontainers.image.created="2025-04-22T08:55:16Z"
LABEL org.opencontainers.image.created="2025-04-29T10:54:42Z"
LABEL org.opencontainers.image.source="https://github.com/samtools/bcftools"
LABEL org.opencontainers.image.revision="1efc0264ca674d8cff7729fcd0ad8f11ea06ee27"
LABEL org.opencontainers.image.revision="c733de2e4cc21eccb241060f82bce0b332f79d81"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER

8
target/executable/bcftools/bcftools_sort/.config.vsh.yaml
View File

@@ -187,16 +187,16 @@ build_info:
engine: "docker|native"
output: "target/executable/bcftools/bcftools_sort"
executable: "target/executable/bcftools/bcftools_sort/bcftools_sort"
viash_version: "0.9.2"
git_commit: "1efc0264ca674d8cff7729fcd0ad8f11ea06ee27"
viash_version: "0.9.4"
git_commit: "c733de2e4cc21eccb241060f82bce0b332f79d81"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-31-g1efc026"
git_tag: "v0.2.0-32-gc733de2"
package_config:
name: "biobox"
version: "main"
description: "A collection of bioinformatics tools for working with sequence data.\n"
info: null
viash_version: "0.9.2"
viash_version: "0.9.4"
source: "src"
target: "target"
config_mods:

6
target/executable/bcftools/bcftools_sort/bcftools_sort
View File

@@ -2,7 +2,7 @@
# bcftools_sort main
#
# This wrapper script is auto-generated by viash 0.9.2 and is thus a derivative
# This wrapper script is auto-generated by viash 0.9.4 and is thus a derivative
# work thereof. This software comes with ABSOLUTELY NO WARRANTY from Data
# Intuitive.
#
@@ -456,9 +456,9 @@ RUN echo "bcftools: \"$(bcftools --version | grep 'bcftools' | sed -n 's/^bcftoo
LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
LABEL org.opencontainers.image.description="Companion container for running component bcftools bcftools_sort"
LABEL org.opencontainers.image.created="2025-04-22T08:55:17Z"
LABEL org.opencontainers.image.created="2025-04-29T10:54:42Z"
LABEL org.opencontainers.image.source="https://github.com/samtools/bcftools"
LABEL org.opencontainers.image.revision="1efc0264ca674d8cff7729fcd0ad8f11ea06ee27"
LABEL org.opencontainers.image.revision="c733de2e4cc21eccb241060f82bce0b332f79d81"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER

8
target/executable/bcftools/bcftools_stats/.config.vsh.yaml
View File

@@ -460,16 +460,16 @@ build_info:
engine: "docker|native"
output: "target/executable/bcftools/bcftools_stats"
executable: "target/executable/bcftools/bcftools_stats/bcftools_stats"
viash_version: "0.9.2"
git_commit: "1efc0264ca674d8cff7729fcd0ad8f11ea06ee27"
viash_version: "0.9.4"
git_commit: "c733de2e4cc21eccb241060f82bce0b332f79d81"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-31-g1efc026"
git_tag: "v0.2.0-32-gc733de2"
package_config:
name: "biobox"
version: "main"
description: "A collection of bioinformatics tools for working with sequence data.\n"
info: null
viash_version: "0.9.2"
viash_version: "0.9.4"
source: "src"
target: "target"
config_mods:

6
target/executable/bcftools/bcftools_stats/bcftools_stats
View File

@@ -2,7 +2,7 @@
# bcftools_stats main
#
# This wrapper script is auto-generated by viash 0.9.2 and is thus a derivative
# This wrapper script is auto-generated by viash 0.9.4 and is thus a derivative
# work thereof. This software comes with ABSOLUTELY NO WARRANTY from Data
# Intuitive.
#
@@ -456,9 +456,9 @@ RUN echo "bcftools: \"$(bcftools --version | grep 'bcftools' | sed -n 's/^bcftoo
LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
LABEL org.opencontainers.image.description="Companion container for running component bcftools bcftools_stats"
LABEL org.opencontainers.image.created="2025-04-22T08:55:16Z"
LABEL org.opencontainers.image.created="2025-04-29T10:54:42Z"
LABEL org.opencontainers.image.source="https://github.com/samtools/bcftools"
LABEL org.opencontainers.image.revision="1efc0264ca674d8cff7729fcd0ad8f11ea06ee27"
LABEL org.opencontainers.image.revision="c733de2e4cc21eccb241060f82bce0b332f79d81"
LABEL org.opencontainers.image.version="main"
VIASHDOCKER