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Build branch update-readme with version update-readme (dad5d20)

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Build pipeline: viash-hub.biobox.update-readme-jtlpr

Source commit: dad5d20b70

Source message: update changelog
This commit is contained in:
CI
2025-05-05 21:55:27 +00:00
parent 3db1abb6cc
commit c7ba8cccb2
327 changed files with 657 additions and 653 deletions
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4
CHANGELOG.md
View File

@@ -10,6 +10,10 @@
* Bump viash to `0.9.4` (PR #175).
## DOCUMENTATION
* Update README (PR #176).
# biobox 0.3.0
## NEW FUNCTIONALITY

6
README.md
View File

@@ -38,9 +38,9 @@ include:
Viash components in biobox can be run in various ways:
``` mermaid
``` mermaid lang="mermaid"
flowchart TD
A[Viash Hub] --> B(Viash Hub Launch)
A[biobox v0.3.0] --> B(Viash Hub Launch)
A --> C(Viash CLI)
A --> D(Nextflow CLI)
A --> E(Seqera Cloud)
@@ -72,7 +72,7 @@ viash run vsh://biobox@v0.3.0/arriba -- \
This will run the component with the specified input files and output
the results to the specified output file.
### 3. Via the Nextflow CLI
### 3. Via the Nextflow CLI or Seqera Cloud
You can run this component as a Nextflow pipeline.

4
README.qmd
View File

@@ -26,7 +26,7 @@ Viash components in `r project$name` can be run in various ways:
```{mermaid}
flowchart TD
A[Viash Hub] --> B(Viash Hub Launch)
A[biobox v0.3.0] --> B(Viash Hub Launch)
A --> C(Viash CLI)
A --> D(Nextflow CLI)
A --> E(Seqera Cloud)
@@ -55,7 +55,7 @@ viash run vsh://biobox@v0.3.0/arriba -- \
This will run the component with the specified input files and output the results to the specified output file.
### 3. Via the Nextflow CLI
### 3. Via the Nextflow CLI or Seqera Cloud
You can run this component as a Nextflow pipeline.

4
target/executable/agat/agat_convert_bed2gff/.config.vsh.yaml
View File

@@ -238,9 +238,9 @@ build_info:
output: "target/executable/agat/agat_convert_bed2gff"
executable: "target/executable/agat/agat_convert_bed2gff/agat_convert_bed2gff"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/agat/agat_convert_bed2gff/agat_convert_bed2gff
View File

@@ -452,9 +452,9 @@ RUN agat --version | sed 's/AGAT\s\(.*\)/agat: "\1"/' > /var/software_versions.t
LABEL org.opencontainers.image.authors="Leïla Paquay"
LABEL org.opencontainers.image.description="Companion container for running component agat agat_convert_bed2gff"
LABEL org.opencontainers.image.created="2025-05-05T16:05:19Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:58Z"
LABEL org.opencontainers.image.source="https://github.com/NBISweden/AGAT"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/agat/agat_convert_embl2gff/.config.vsh.yaml
View File

@@ -228,9 +228,9 @@ build_info:
output: "target/executable/agat/agat_convert_embl2gff"
executable: "target/executable/agat/agat_convert_embl2gff/agat_convert_embl2gff"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/agat/agat_convert_embl2gff/agat_convert_embl2gff
View File

@@ -452,9 +452,9 @@ RUN agat --version | sed 's/AGAT\s\(.*\)/agat: "\1"/' > /var/software_versions.t
LABEL org.opencontainers.image.authors="Leïla Paquay"
LABEL org.opencontainers.image.description="Companion container for running component agat agat_convert_embl2gff"
LABEL org.opencontainers.image.created="2025-05-05T16:05:20Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:59Z"
LABEL org.opencontainers.image.source="https://github.com/NBISweden/AGAT"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/agat/agat_convert_genscan2gff/.config.vsh.yaml
View File

@@ -233,9 +233,9 @@ build_info:
output: "target/executable/agat/agat_convert_genscan2gff"
executable: "target/executable/agat/agat_convert_genscan2gff/agat_convert_genscan2gff"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/agat/agat_convert_genscan2gff/agat_convert_genscan2gff
View File

@@ -452,9 +452,9 @@ RUN agat --version | sed 's/AGAT\s\(.*\)/agat: "\1"/' > /var/software_versions.t
LABEL org.opencontainers.image.authors="Leïla Paquay"
LABEL org.opencontainers.image.description="Companion container for running component agat agat_convert_genscan2gff"
LABEL org.opencontainers.image.created="2025-05-05T16:05:19Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:59Z"
LABEL org.opencontainers.image.source="https://github.com/NBISweden/AGAT"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/agat/agat_convert_mfannot2gff/.config.vsh.yaml
View File

@@ -189,9 +189,9 @@ build_info:
output: "target/executable/agat/agat_convert_mfannot2gff"
executable: "target/executable/agat/agat_convert_mfannot2gff/agat_convert_mfannot2gff"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/agat/agat_convert_mfannot2gff/agat_convert_mfannot2gff
View File

@@ -452,9 +452,9 @@ RUN agat --version | sed 's/AGAT\s\(.*\)/agat: "\1"/' > /var/software_versions.t
LABEL org.opencontainers.image.authors="Leïla Paquay"
LABEL org.opencontainers.image.description="Companion container for running component agat agat_convert_mfannot2gff"
LABEL org.opencontainers.image.created="2025-05-05T16:05:19Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:59Z"
LABEL org.opencontainers.image.source="https://github.com/NBISweden/AGAT"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/agat/agat_convert_sp_gff2gtf/.config.vsh.yaml
View File

@@ -231,9 +231,9 @@ build_info:
output: "target/executable/agat/agat_convert_sp_gff2gtf"
executable: "target/executable/agat/agat_convert_sp_gff2gtf/agat_convert_sp_gff2gtf"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/agat/agat_convert_sp_gff2gtf/agat_convert_sp_gff2gtf
View File

@@ -452,9 +452,9 @@ RUN agat --version | sed 's/AGAT\s\(.*\)/agat: "\1"/' > /var/software_versions.t
LABEL org.opencontainers.image.authors="Leïla Paquay"
LABEL org.opencontainers.image.description="Companion container for running component agat agat_convert_sp_gff2gtf"
LABEL org.opencontainers.image.created="2025-05-05T16:05:18Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:58Z"
LABEL org.opencontainers.image.source="https://github.com/NBISweden/AGAT"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/agat/agat_convert_sp_gff2tsv/.config.vsh.yaml
View File

@@ -191,9 +191,9 @@ build_info:
output: "target/executable/agat/agat_convert_sp_gff2tsv"
executable: "target/executable/agat/agat_convert_sp_gff2tsv/agat_convert_sp_gff2tsv"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/agat/agat_convert_sp_gff2tsv/agat_convert_sp_gff2tsv
View File

@@ -452,9 +452,9 @@ RUN agat --version | sed 's/AGAT\s\(.*\)/agat: "\1"/' > /var/software_versions.t
LABEL org.opencontainers.image.authors="Leïla Paquay"
LABEL org.opencontainers.image.description="Companion container for running component agat agat_convert_sp_gff2tsv"
LABEL org.opencontainers.image.created="2025-05-05T16:05:18Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:58Z"
LABEL org.opencontainers.image.source="https://github.com/NBISweden/AGAT"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/agat/agat_convert_sp_gxf2gxf/.config.vsh.yaml
View File

@@ -198,9 +198,9 @@ build_info:
output: "target/executable/agat/agat_convert_sp_gxf2gxf"
executable: "target/executable/agat/agat_convert_sp_gxf2gxf/agat_convert_sp_gxf2gxf"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/agat/agat_convert_sp_gxf2gxf/agat_convert_sp_gxf2gxf
View File

@@ -452,9 +452,9 @@ RUN agat --version | sed 's/AGAT\s\(.*\)/agat: "\1"/' > /var/software_versions.t
LABEL org.opencontainers.image.authors="Leïla Paquay"
LABEL org.opencontainers.image.description="Companion container for running component agat agat_convert_sp_gxf2gxf"
LABEL org.opencontainers.image.created="2025-05-05T16:05:20Z"
LABEL org.opencontainers.image.created="2025-05-05T21:39:00Z"
LABEL org.opencontainers.image.source="https://github.com/NBISweden/AGAT"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/agat/agat_sp_add_introns/.config.vsh.yaml
View File

@@ -189,9 +189,9 @@ build_info:
output: "target/executable/agat/agat_sp_add_introns"
executable: "target/executable/agat/agat_sp_add_introns/agat_sp_add_introns"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/agat/agat_sp_add_introns/agat_sp_add_introns
View File

@@ -452,9 +452,9 @@ RUN agat --version | sed 's/AGAT\s\(.*\)/agat: "\1"/' > /var/software_versions.t
LABEL org.opencontainers.image.authors="Leïla Paquay"
LABEL org.opencontainers.image.description="Companion container for running component agat agat_sp_add_introns"
LABEL org.opencontainers.image.created="2025-05-05T16:05:18Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:57Z"
LABEL org.opencontainers.image.source="https://github.com/NBISweden/AGAT"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/agat/agat_sp_filter_feature_from_kill_list/.config.vsh.yaml
View File

@@ -239,9 +239,9 @@ build_info:
output: "target/executable/agat/agat_sp_filter_feature_from_kill_list"
executable: "target/executable/agat/agat_sp_filter_feature_from_kill_list/agat_sp_filter_feature_from_kill_list"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/agat/agat_sp_filter_feature_from_kill_list/agat_sp_filter_feature_from_kill_list
View File

@@ -452,9 +452,9 @@ RUN agat --version | sed 's/AGAT\s\(.*\)/agat: "\1"/' > /var/software_versions.t
LABEL org.opencontainers.image.authors="Leïla Paquay"
LABEL org.opencontainers.image.description="Companion container for running component agat agat_sp_filter_feature_from_kill_list"
LABEL org.opencontainers.image.created="2025-05-05T16:05:18Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:58Z"
LABEL org.opencontainers.image.source="https://github.com/NBISweden/AGAT"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/agat/agat_sp_merge_annotations/.config.vsh.yaml
View File

@@ -187,9 +187,9 @@ build_info:
output: "target/executable/agat/agat_sp_merge_annotations"
executable: "target/executable/agat/agat_sp_merge_annotations/agat_sp_merge_annotations"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/agat/agat_sp_merge_annotations/agat_sp_merge_annotations
View File

@@ -452,9 +452,9 @@ RUN agat --version | sed 's/AGAT\s\(.*\)/agat: "\1"/' > /var/software_versions.t
LABEL org.opencontainers.image.authors="Leïla Paquay"
LABEL org.opencontainers.image.description="Companion container for running component agat agat_sp_merge_annotations"
LABEL org.opencontainers.image.created="2025-05-05T16:05:19Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:59Z"
LABEL org.opencontainers.image.source="https://github.com/NBISweden/AGAT"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/agat/agat_sp_statistics/.config.vsh.yaml
View File

@@ -234,9 +234,9 @@ build_info:
output: "target/executable/agat/agat_sp_statistics"
executable: "target/executable/agat/agat_sp_statistics/agat_sp_statistics"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/agat/agat_sp_statistics/agat_sp_statistics
View File

@@ -452,9 +452,9 @@ RUN agat --version | sed 's/.*v\.//; s/\s.*//' | sed 's/^/AGAT: /' > /var/softwa
LABEL org.opencontainers.image.authors="Leïla Paquay"
LABEL org.opencontainers.image.description="Companion container for running component agat agat_sp_statistics"
LABEL org.opencontainers.image.created="2025-05-05T16:05:20Z"
LABEL org.opencontainers.image.created="2025-05-05T21:39:00Z"
LABEL org.opencontainers.image.source="https://github.com/NBISweden/AGAT"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/agat/agat_sq_stat_basic/.config.vsh.yaml
View File

@@ -230,9 +230,9 @@ build_info:
output: "target/executable/agat/agat_sq_stat_basic"
executable: "target/executable/agat/agat_sq_stat_basic/agat_sq_stat_basic"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/agat/agat_sq_stat_basic/agat_sq_stat_basic
View File

@@ -452,9 +452,9 @@ RUN agat --version | sed 's/AGAT\s\(.*\)/agat: "\1"/' > /var/software_versions.t
LABEL org.opencontainers.image.authors="Leïla Paquay"
LABEL org.opencontainers.image.description="Companion container for running component agat agat_sq_stat_basic"
LABEL org.opencontainers.image.created="2025-05-05T16:05:17Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:57Z"
LABEL org.opencontainers.image.source="https://github.com/NBISweden/AGAT"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/arriba/.config.vsh.yaml
View File

@@ -709,9 +709,9 @@ build_info:
output: "target/executable/arriba"
executable: "target/executable/arriba/arriba"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/arriba/arriba
View File

@@ -452,9 +452,9 @@ RUN arriba -h | grep 'Version:' 2>&1 | sed 's/Version:\s\(.*\)/arriba: "\1"/' >
LABEL org.opencontainers.image.authors="Robrecht Cannoodt"
LABEL org.opencontainers.image.description="Companion container for running component arriba"
LABEL org.opencontainers.image.created="2025-05-05T16:05:21Z"
LABEL org.opencontainers.image.created="2025-05-05T21:39:01Z"
LABEL org.opencontainers.image.source="https://github.com/suhrig/arriba"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/bases2fastq/.config.vsh.yaml
View File

@@ -397,9 +397,9 @@ build_info:
output: "target/executable/bases2fastq"
executable: "target/executable/bases2fastq/bases2fastq"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/bases2fastq/bases2fastq
View File

@@ -456,9 +456,9 @@ RUN echo "bases2fastq: $(bases2fastq --version | cut -d' ' -f3)" > /var/software
LABEL org.opencontainers.image.authors="Dries Schaumont"
LABEL org.opencontainers.image.description="Companion container for running component bases2fastq"
LABEL org.opencontainers.image.created="2025-05-05T16:05:18Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:58Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/biobox"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/bbmap/bbmap_bbsplit/.config.vsh.yaml
View File

@@ -371,9 +371,9 @@ build_info:
output: "target/executable/bbmap/bbmap_bbsplit"
executable: "target/executable/bbmap/bbmap_bbsplit/bbmap_bbsplit"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/bbmap/bbmap_bbsplit/bbmap_bbsplit
View File

@@ -454,9 +454,9 @@ cp -r bbmap/* /usr/local/bin
RUN bbsplit.sh --version 2>&1 | awk '/BBMap version/{print "BBMAP:", $NF}' > /var/software_versions.txt
LABEL org.opencontainers.image.description="Companion container for running component bbmap bbmap_bbsplit"
LABEL org.opencontainers.image.created="2025-05-05T16:05:15Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:55Z"
LABEL org.opencontainers.image.source="https://github.com/BioInfoTools/BBMap/blob/master/sh/bbsplit.sh"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/bcftools/bcftools_annotate/.config.vsh.yaml
View File

@@ -472,9 +472,9 @@ build_info:
output: "target/executable/bcftools/bcftools_annotate"
executable: "target/executable/bcftools/bcftools_annotate/bcftools_annotate"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/bcftools/bcftools_annotate/bcftools_annotate
View File

@@ -456,9 +456,9 @@ RUN echo "bcftools: \"$(bcftools --version | grep 'bcftools' | sed -n 's/^bcftoo
LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
LABEL org.opencontainers.image.description="Companion container for running component bcftools bcftools_annotate"
LABEL org.opencontainers.image.created="2025-05-05T16:05:14Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:54Z"
LABEL org.opencontainers.image.source="https://github.com/samtools/bcftools"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/bcftools/bcftools_concat/.config.vsh.yaml
View File

@@ -338,9 +338,9 @@ build_info:
output: "target/executable/bcftools/bcftools_concat"
executable: "target/executable/bcftools/bcftools_concat/bcftools_concat"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/bcftools/bcftools_concat/bcftools_concat
View File

@@ -456,9 +456,9 @@ RUN echo "bcftools: \"$(bcftools --version | grep 'bcftools' | sed -n 's/^bcftoo
LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
LABEL org.opencontainers.image.description="Companion container for running component bcftools bcftools_concat"
LABEL org.opencontainers.image.created="2025-05-05T16:05:14Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:54Z"
LABEL org.opencontainers.image.source="https://github.com/samtools/bcftools"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/bcftools/bcftools_norm/.config.vsh.yaml
View File

@@ -419,9 +419,9 @@ build_info:
output: "target/executable/bcftools/bcftools_norm"
executable: "target/executable/bcftools/bcftools_norm/bcftools_norm"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/bcftools/bcftools_norm/bcftools_norm
View File

@@ -456,9 +456,9 @@ RUN echo "bcftools: \"$(bcftools --version | grep 'bcftools' | sed -n 's/^bcftoo
LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
LABEL org.opencontainers.image.description="Companion container for running component bcftools bcftools_norm"
LABEL org.opencontainers.image.created="2025-05-05T16:05:13Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:53Z"
LABEL org.opencontainers.image.source="https://github.com/samtools/bcftools"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/bcftools/bcftools_sort/.config.vsh.yaml
View File

@@ -188,9 +188,9 @@ build_info:
output: "target/executable/bcftools/bcftools_sort"
executable: "target/executable/bcftools/bcftools_sort/bcftools_sort"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/bcftools/bcftools_sort/bcftools_sort
View File

@@ -456,9 +456,9 @@ RUN echo "bcftools: \"$(bcftools --version | grep 'bcftools' | sed -n 's/^bcftoo
LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
LABEL org.opencontainers.image.description="Companion container for running component bcftools bcftools_sort"
LABEL org.opencontainers.image.created="2025-05-05T16:05:14Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:54Z"
LABEL org.opencontainers.image.source="https://github.com/samtools/bcftools"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/bcftools/bcftools_stats/.config.vsh.yaml
View File

@@ -461,9 +461,9 @@ build_info:
output: "target/executable/bcftools/bcftools_stats"
executable: "target/executable/bcftools/bcftools_stats/bcftools_stats"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/bcftools/bcftools_stats/bcftools_stats
View File

@@ -456,9 +456,9 @@ RUN echo "bcftools: \"$(bcftools --version | grep 'bcftools' | sed -n 's/^bcftoo
LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
LABEL org.opencontainers.image.description="Companion container for running component bcftools bcftools_stats"
LABEL org.opencontainers.image.created="2025-05-05T16:05:14Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:53Z"
LABEL org.opencontainers.image.source="https://github.com/samtools/bcftools"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/bcl_convert/.config.vsh.yaml
View File

@@ -431,9 +431,9 @@ build_info:
output: "target/executable/bcl_convert"
executable: "target/executable/bcl_convert/bcl_convert"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/bcl_convert/bcl_convert
View File

@@ -462,9 +462,9 @@ RUN echo "bcl-convert: \"$(bcl-convert -V 2>&1 >/dev/null | sed -n '/Version/ s/
LABEL org.opencontainers.image.authors="Toni Verbeiren, Dorien Roosen"
LABEL org.opencontainers.image.description="Companion container for running component bcl_convert"
LABEL org.opencontainers.image.created="2025-05-05T16:05:15Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:55Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/biobox"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/bd_rhapsody/bd_rhapsody_make_reference/.config.vsh.yaml
View File

@@ -277,9 +277,9 @@ build_info:
output: "target/executable/bd_rhapsody/bd_rhapsody_make_reference"
executable: "target/executable/bd_rhapsody/bd_rhapsody_make_reference/bd_rhapsody_make_reference"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/bd_rhapsody/bd_rhapsody_make_reference/bd_rhapsody_make_reference
View File

@@ -465,9 +465,9 @@ RUN VERSION=$(ls -v /var/bd_rhapsody_cwl | grep '^v' | sed 's#v##' | tail -1)
RUN echo "bdgenomics/rhapsody: \"$VERSION\"" > /var/software_versions.txt
LABEL org.opencontainers.image.authors="Robrecht Cannoodt, Weiwei Schultz"
LABEL org.opencontainers.image.description="Companion container for running component bd_rhapsody bd_rhapsody_make_reference"
LABEL org.opencontainers.image.created="2025-05-05T16:05:16Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:56Z"
LABEL org.opencontainers.image.source="https://bitbucket.org/CRSwDev/cwl/src/master/v2.2.1/Extra_Utilities/"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/bd_rhapsody/bd_rhapsody_sequence_analysis/.config.vsh.yaml
View File

@@ -1118,9 +1118,9 @@ build_info:
output: "target/executable/bd_rhapsody/bd_rhapsody_sequence_analysis"
executable: "target/executable/bd_rhapsody/bd_rhapsody_sequence_analysis/bd_rhapsody_sequence_analysis"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/bd_rhapsody/bd_rhapsody_sequence_analysis/bd_rhapsody_sequence_analysis
View File

@@ -465,9 +465,9 @@ RUN VERSION=$(ls -v /var/bd_rhapsody_cwl | grep '^v' | sed 's#v##' | tail -1)
RUN echo "bdgenomics/rhapsody: \"$VERSION\"" > /var/software_versions.txt
LABEL org.opencontainers.image.authors="Robrecht Cannoodt, Weiwei Schultz"
LABEL org.opencontainers.image.description="Companion container for running component bd_rhapsody bd_rhapsody_sequence_analysis"
LABEL org.opencontainers.image.created="2025-05-05T16:05:16Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:56Z"
LABEL org.opencontainers.image.source="https://bitbucket.org/CRSwDev/cwl/src/master/v2.2.1"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/bedtools/bedtools_bamtobed/.config.vsh.yaml
View File

@@ -238,9 +238,9 @@ build_info:
output: "target/executable/bedtools/bedtools_bamtobed"
executable: "target/executable/bedtools/bedtools_bamtobed/bedtools_bamtobed"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/bedtools/bedtools_bamtobed/bedtools_bamtobed
View File

@@ -456,9 +456,9 @@ RUN echo "bedtools: \"$(bedtools --version | sed -n 's/^bedtools //p')\"" > /var
LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
LABEL org.opencontainers.image.description="Companion container for running component bedtools bedtools_bamtobed"
LABEL org.opencontainers.image.created="2025-05-05T16:05:18Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:58Z"
LABEL org.opencontainers.image.source="https://github.com/arq5x/bedtools2"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/bedtools/bedtools_bamtofastq/.config.vsh.yaml
View File

@@ -190,9 +190,9 @@ build_info:
output: "target/executable/bedtools/bedtools_bamtofastq"
executable: "target/executable/bedtools/bedtools_bamtofastq/bedtools_bamtofastq"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/bedtools/bedtools_bamtofastq/bedtools_bamtofastq
View File

@@ -456,9 +456,9 @@ RUN echo "bedtools: \"$(bedtools --version | sed -n 's/^bedtools //p')\"" > /var
LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
LABEL org.opencontainers.image.description="Companion container for running component bedtools bedtools_bamtofastq"
LABEL org.opencontainers.image.created="2025-05-05T16:05:21Z"
LABEL org.opencontainers.image.created="2025-05-05T21:39:01Z"
LABEL org.opencontainers.image.source="https://github.com/arq5x/bedtools2"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/bedtools/bedtools_bed12tobed6/.config.vsh.yaml
View File

@@ -179,9 +179,9 @@ build_info:
output: "target/executable/bedtools/bedtools_bed12tobed6"
executable: "target/executable/bedtools/bedtools_bed12tobed6/bedtools_bed12tobed6"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/bedtools/bedtools_bed12tobed6/bedtools_bed12tobed6
View File

@@ -456,9 +456,9 @@ RUN echo "bedtools: \"$(bedtools --version | sed -n 's/^bedtools //p')\"" > /var
LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
LABEL org.opencontainers.image.description="Companion container for running component bedtools bedtools_bed12tobed6"
LABEL org.opencontainers.image.created="2025-05-05T16:05:21Z"
LABEL org.opencontainers.image.created="2025-05-05T21:39:00Z"
LABEL org.opencontainers.image.source="https://github.com/arq5x/bedtools2"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/bedtools/bedtools_bedtobam/.config.vsh.yaml
View File

@@ -217,9 +217,9 @@ build_info:
output: "target/executable/bedtools/bedtools_bedtobam"
executable: "target/executable/bedtools/bedtools_bedtobam/bedtools_bedtobam"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/bedtools/bedtools_bedtobam/bedtools_bedtobam
View File

@@ -456,9 +456,9 @@ RUN echo "bedtools: \"$(bedtools --version | sed -n 's/^bedtools //p')\"" > /var
LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
LABEL org.opencontainers.image.description="Companion container for running component bedtools bedtools_bedtobam"
LABEL org.opencontainers.image.created="2025-05-05T16:05:20Z"
LABEL org.opencontainers.image.created="2025-05-05T21:39:00Z"
LABEL org.opencontainers.image.source="https://github.com/arq5x/bedtools2"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/bedtools/bedtools_genomecov/.config.vsh.yaml
View File

@@ -340,9 +340,9 @@ build_info:
output: "target/executable/bedtools/bedtools_genomecov"
executable: "target/executable/bedtools/bedtools_genomecov/bedtools_genomecov"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/bedtools/bedtools_genomecov/bedtools_genomecov
View File

@@ -456,9 +456,9 @@ RUN echo "bedtools: \"$(bedtools --version | sed -n 's/^bedtools //p')\"" > /var
LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
LABEL org.opencontainers.image.description="Companion container for running component bedtools bedtools_genomecov"
LABEL org.opencontainers.image.created="2025-05-05T16:05:18Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:58Z"
LABEL org.opencontainers.image.source="https://github.com/arq5x/bedtools2"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/bedtools/bedtools_getfasta/.config.vsh.yaml
View File

@@ -235,9 +235,9 @@ build_info:
output: "target/executable/bedtools/bedtools_getfasta"
executable: "target/executable/bedtools/bedtools_getfasta/bedtools_getfasta"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/bedtools/bedtools_getfasta/bedtools_getfasta
View File

@@ -456,9 +456,9 @@ RUN echo "bedtools: \"$(bedtools --version | sed -n 's/^bedtools //p')\"" > /var
LABEL org.opencontainers.image.authors="Dries Schaumont"
LABEL org.opencontainers.image.description="Companion container for running component bedtools bedtools_getfasta"
LABEL org.opencontainers.image.created="2025-05-05T16:05:19Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:58Z"
LABEL org.opencontainers.image.source="https://github.com/arq5x/bedtools2"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/bedtools/bedtools_groupby/.config.vsh.yaml
View File

@@ -276,9 +276,9 @@ build_info:
output: "target/executable/bedtools/bedtools_groupby"
executable: "target/executable/bedtools/bedtools_groupby/bedtools_groupby"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/bedtools/bedtools_groupby/bedtools_groupby
View File

@@ -456,9 +456,9 @@ RUN echo "bedtools: \"$(bedtools --version | sed -n 's/^bedtools //p')\"" > /var
LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
LABEL org.opencontainers.image.description="Companion container for running component bedtools bedtools_groupby"
LABEL org.opencontainers.image.created="2025-05-05T16:05:19Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:59Z"
LABEL org.opencontainers.image.source="https://github.com/arq5x/bedtools2"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/bedtools/bedtools_intersect/.config.vsh.yaml
View File

@@ -413,9 +413,9 @@ build_info:
output: "target/executable/bedtools/bedtools_intersect"
executable: "target/executable/bedtools/bedtools_intersect/bedtools_intersect"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/bedtools/bedtools_intersect/bedtools_intersect
View File

@@ -456,9 +456,9 @@ RUN echo "bedtools: \"$(bedtools --version | sed -n 's/^bedtools //p')\"" > /var
LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
LABEL org.opencontainers.image.description="Companion container for running component bedtools bedtools_intersect"
LABEL org.opencontainers.image.created="2025-05-05T16:05:20Z"
LABEL org.opencontainers.image.created="2025-05-05T21:39:00Z"
LABEL org.opencontainers.image.source="https://github.com/arq5x/bedtools2"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/bedtools/bedtools_links/.config.vsh.yaml
View File

@@ -213,9 +213,9 @@ build_info:
output: "target/executable/bedtools/bedtools_links"
executable: "target/executable/bedtools/bedtools_links/bedtools_links"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/bedtools/bedtools_links/bedtools_links
View File

@@ -456,9 +456,9 @@ RUN echo "bedtools: \"$(bedtools --version | sed -n 's/^bedtools //p')\"" > /var
LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
LABEL org.opencontainers.image.description="Companion container for running component bedtools bedtools_links"
LABEL org.opencontainers.image.created="2025-05-05T16:05:20Z"
LABEL org.opencontainers.image.created="2025-05-05T21:39:00Z"
LABEL org.opencontainers.image.source="https://github.com/arq5x/bedtools2"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/bedtools/bedtools_merge/.config.vsh.yaml
View File

@@ -282,9 +282,9 @@ build_info:
output: "target/executable/bedtools/bedtools_merge"
executable: "target/executable/bedtools/bedtools_merge/bedtools_merge"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/bedtools/bedtools_merge/bedtools_merge
View File

@@ -456,9 +456,9 @@ RUN echo "bedtools: \"$(bedtools --version | sed -n 's/^bedtools //p')\"" > /var
LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
LABEL org.opencontainers.image.description="Companion container for running component bedtools bedtools_merge"
LABEL org.opencontainers.image.created="2025-05-05T16:05:19Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:59Z"
LABEL org.opencontainers.image.source="https://github.com/arq5x/bedtools2"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/bedtools/bedtools_sort/.config.vsh.yaml
View File

@@ -225,9 +225,9 @@ build_info:
output: "target/executable/bedtools/bedtools_sort"
executable: "target/executable/bedtools/bedtools_sort/bedtools_sort"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/bedtools/bedtools_sort/bedtools_sort
View File

@@ -456,9 +456,9 @@ RUN echo "bedtools: \"$(bedtools --version | sed -n 's/^bedtools //p')\"" > /var
LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
LABEL org.opencontainers.image.description="Companion container for running component bedtools bedtools_sort"
LABEL org.opencontainers.image.created="2025-05-05T16:05:19Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:59Z"
LABEL org.opencontainers.image.source="https://github.com/arq5x/bedtools2"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/busco/busco_download_datasets/.config.vsh.yaml
View File

@@ -161,9 +161,9 @@ build_info:
output: "target/executable/busco/busco_download_datasets"
executable: "target/executable/busco/busco_download_datasets/busco_download_datasets"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/busco/busco_download_datasets/busco_download_datasets
View File

@@ -452,9 +452,9 @@ RUN busco --version | sed 's/BUSCO\s\(.*\)/busco: "\1"/' > /var/software_version
LABEL org.opencontainers.image.authors="Dorien Roosen"
LABEL org.opencontainers.image.description="Companion container for running component busco busco_download_datasets"
LABEL org.opencontainers.image.created="2025-05-05T16:05:17Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:57Z"
LABEL org.opencontainers.image.source="https://gitlab.com/ezlab/busco"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/busco/busco_list_datasets/.config.vsh.yaml
View File

@@ -148,9 +148,9 @@ build_info:
output: "target/executable/busco/busco_list_datasets"
executable: "target/executable/busco/busco_list_datasets/busco_list_datasets"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/busco/busco_list_datasets/busco_list_datasets
View File

@@ -452,9 +452,9 @@ RUN busco --version | sed 's/BUSCO\s\(.*\)/busco: "\1"/' > /var/software_version
LABEL org.opencontainers.image.authors="Dorien Roosen"
LABEL org.opencontainers.image.description="Companion container for running component busco busco_list_datasets"
LABEL org.opencontainers.image.created="2025-05-05T16:05:16Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:56Z"
LABEL org.opencontainers.image.source="https://gitlab.com/ezlab/busco"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/busco/busco_run/.config.vsh.yaml
View File

@@ -426,9 +426,9 @@ build_info:
output: "target/executable/busco/busco_run"
executable: "target/executable/busco/busco_run/busco_run"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/busco/busco_run/busco_run
View File

@@ -452,9 +452,9 @@ RUN busco --version | sed 's/BUSCO\s\(.*\)/busco: "\1"/' > /var/software_version
LABEL org.opencontainers.image.authors="Dorien Roosen"
LABEL org.opencontainers.image.description="Companion container for running component busco busco_run"
LABEL org.opencontainers.image.created="2025-05-05T16:05:17Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:56Z"
LABEL org.opencontainers.image.source="https://gitlab.com/ezlab/busco"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/cellranger/cellranger_mkref/.config.vsh.yaml
View File

@@ -198,9 +198,9 @@ build_info:
output: "target/executable/cellranger/cellranger_mkref"
executable: "target/executable/cellranger/cellranger_mkref/cellranger_mkref"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/cellranger/cellranger_mkref/cellranger_mkref
View File

@@ -454,9 +454,9 @@ RUN apt-get update && \
LABEL org.opencontainers.image.authors="Emma Rousseau"
LABEL org.opencontainers.image.description="Companion container for running component cellranger cellranger_mkref"
LABEL org.opencontainers.image.created="2025-05-05T16:05:21Z"
LABEL org.opencontainers.image.created="2025-05-05T21:39:00Z"
LABEL org.opencontainers.image.source="https://github.com/10XGenomics/cellranger/blob/main/lib/python/cellranger/reference_builder.py"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/cutadapt/.config.vsh.yaml
View File

@@ -743,9 +743,9 @@ build_info:
output: "target/executable/cutadapt"
executable: "target/executable/cutadapt/cutadapt"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/cutadapt/cutadapt
View File

@@ -455,9 +455,9 @@ RUN cutadapt --version | sed 's/\(.*\)/cutadapt: "\1"/' > /var/software_versions
LABEL org.opencontainers.image.authors="Toni Verbeiren"
LABEL org.opencontainers.image.description="Companion container for running component cutadapt"
LABEL org.opencontainers.image.created="2025-05-05T16:05:18Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:57Z"
LABEL org.opencontainers.image.source="https://github.com/marcelm/cutadapt"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/falco/.config.vsh.yaml
View File

@@ -320,9 +320,9 @@ build_info:
output: "target/executable/falco"
executable: "target/executable/falco/falco"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/falco/falco
View File

@@ -464,9 +464,9 @@ RUN echo "falco: \"$(falco -v | sed -n 's/^falco //p')\"" > /var/software_versio
LABEL org.opencontainers.image.authors="Toni Verbeiren"
LABEL org.opencontainers.image.description="Companion container for running component falco"
LABEL org.opencontainers.image.created="2025-05-05T16:05:23Z"
LABEL org.opencontainers.image.created="2025-05-05T21:39:03Z"
LABEL org.opencontainers.image.source="https://github.com/smithlabcode/falco"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/fastp/.config.vsh.yaml
View File

@@ -1086,9 +1086,9 @@ build_info:
output: "target/executable/fastp"
executable: "target/executable/fastp/fastp"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/fastp/fastp
View File

@@ -452,9 +452,9 @@ RUN fastp --version 2>&1 | sed 's# #: "#;s#$#"#' > /var/software_versions.txt
LABEL org.opencontainers.image.authors="Robrecht Cannoodt"
LABEL org.opencontainers.image.description="Companion container for running component fastp"
LABEL org.opencontainers.image.created="2025-05-05T16:05:15Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:54Z"
LABEL org.opencontainers.image.source="https://github.com/OpenGene/fastp"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/fastqc/.config.vsh.yaml
View File

@@ -343,9 +343,9 @@ build_info:
output: "target/executable/fastqc"
executable: "target/executable/fastqc/fastqc"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/fastqc/fastqc
View File

@@ -452,9 +452,9 @@ RUN echo "fastqc: $(fastqc --version | sed -n 's/^FastQC //p')" > /var/software_
LABEL org.opencontainers.image.authors="Theodoro Gasperin Terra Camargo"
LABEL org.opencontainers.image.description="Companion container for running component fastqc"
LABEL org.opencontainers.image.created="2025-05-05T16:05:23Z"
LABEL org.opencontainers.image.created="2025-05-05T21:39:03Z"
LABEL org.opencontainers.image.source="https://github.com/s-andrews/FastQC"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/featurecounts/.config.vsh.yaml
View File

@@ -648,9 +648,9 @@ build_info:
output: "target/executable/featurecounts"
executable: "target/executable/featurecounts/featurecounts"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/featurecounts/featurecounts
View File

@@ -452,9 +452,9 @@ RUN featureCounts -v 2>&1 | sed 's/featureCounts v\([0-9.]*\)/featureCounts: \1/
LABEL org.opencontainers.image.authors="Sai Nirmayi Yasa"
LABEL org.opencontainers.image.description="Companion container for running component featurecounts"
LABEL org.opencontainers.image.created="2025-05-05T16:05:17Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:57Z"
LABEL org.opencontainers.image.source="https://github.com/ShiLab-Bioinformatics/subread"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/fq_subsample/.config.vsh.yaml
View File

@@ -193,9 +193,9 @@ build_info:
output: "target/executable/fq_subsample"
executable: "target/executable/fq_subsample/fq_subsample"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/fq_subsample/fq_subsample
View File

@@ -453,9 +453,9 @@ mv target/release/fq /usr/local/bin/ && \
cd / && rm -rf /fq
LABEL org.opencontainers.image.description="Companion container for running component fq_subsample"
LABEL org.opencontainers.image.created="2025-05-05T16:05:23Z"
LABEL org.opencontainers.image.created="2025-05-05T21:39:03Z"
LABEL org.opencontainers.image.source="https://github.com/stjude-rust-labs/fq"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/gffread/.config.vsh.yaml
View File

@@ -688,9 +688,9 @@ build_info:
output: "target/executable/gffread"
executable: "target/executable/gffread/gffread"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/gffread/gffread
View File

@@ -452,9 +452,9 @@ RUN echo "gffread: \"$(gffread --version 2>&1)\"" > /var/software_versions.txt
LABEL org.opencontainers.image.authors="Emma Rousseau"
LABEL org.opencontainers.image.description="Companion container for running component gffread"
LABEL org.opencontainers.image.created="2025-05-05T16:05:15Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:55Z"
LABEL org.opencontainers.image.source="https://github.com/gpertea/gffread"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/kallisto/kallisto_index/.config.vsh.yaml
View File

@@ -221,9 +221,9 @@ build_info:
output: "target/executable/kallisto/kallisto_index"
executable: "target/executable/kallisto/kallisto_index/kallisto_index"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/kallisto/kallisto_index/kallisto_index
View File

@@ -452,9 +452,9 @@ tar -xzf kallisto_linux-v0.50.1.tar.gz && \
mv kallisto/kallisto /usr/local/bin/
LABEL org.opencontainers.image.description="Companion container for running component kallisto kallisto_index"
LABEL org.opencontainers.image.created="2025-05-05T16:05:21Z"
LABEL org.opencontainers.image.created="2025-05-05T21:39:01Z"
LABEL org.opencontainers.image.source="https://github.com/pachterlab/kallisto"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/kallisto/kallisto_quant/.config.vsh.yaml
View File

@@ -249,9 +249,9 @@ build_info:
output: "target/executable/kallisto/kallisto_quant"
executable: "target/executable/kallisto/kallisto_quant/kallisto_quant"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/kallisto/kallisto_quant/kallisto_quant
View File

@@ -454,9 +454,9 @@ mv kallisto/kallisto /usr/local/bin/
RUN echo "kallisto: $(kallisto version | sed 's/kallisto, version //')" > /var/software_versions.txt
LABEL org.opencontainers.image.description="Companion container for running component kallisto kallisto_quant"
LABEL org.opencontainers.image.created="2025-05-05T16:05:21Z"
LABEL org.opencontainers.image.created="2025-05-05T21:39:01Z"
LABEL org.opencontainers.image.source="https://github.com/pachterlab/kallisto"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/lofreq/lofreq_call/.config.vsh.yaml
View File

@@ -510,9 +510,9 @@ build_info:
output: "target/executable/lofreq/lofreq_call"
executable: "target/executable/lofreq/lofreq_call/lofreq_call"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

4
target/executable/lofreq/lofreq_call/lofreq_call
View File

@@ -453,9 +453,9 @@ echo "lofreq: $version" > /var/software_versions.txt
LABEL org.opencontainers.image.authors="Kai Waldrant"
LABEL org.opencontainers.image.description="Companion container for running component lofreq lofreq_call"
LABEL org.opencontainers.image.created="2025-05-05T16:05:17Z"
LABEL org.opencontainers.image.created="2025-05-05T21:38:56Z"
LABEL org.opencontainers.image.source="https://github.com/viash-hub/biobox"
LABEL org.opencontainers.image.revision="dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
LABEL org.opencontainers.image.revision="dad5d20b708075141311883bff44cea72cbe68e1"
LABEL org.opencontainers.image.version="update-readme"
VIASHDOCKER

4
target/executable/lofreq/lofreq_indelqual/.config.vsh.yaml
View File

@@ -218,9 +218,9 @@ build_info:
output: "target/executable/lofreq/lofreq_indelqual"
executable: "target/executable/lofreq/lofreq_indelqual/lofreq_indelqual"
viash_version: "0.9.4"
git_commit: "dae026c2ad8e1ad1fde7eb871c813b481f7a71c1"
git_commit: "dad5d20b708075141311883bff44cea72cbe68e1"
git_remote: "https://github.com/viash-hub/biobox"
git_tag: "v0.2.0-34-gdae026c"
git_tag: "v0.2.0-36-gdad5d20"
package_config:
name: "biobox"
version: "update-readme"

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