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f47054953e
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Build branch main with version main (38f635a)
Build pipeline: viash-hub.biobox.main-dz9k8
Source commit: 38f635ad57
Source message: Add agat convert genscan2gff (#100)
* add config
* add help
* add test data and expected output adn the script to obtain them
* add running script
* add test script
* update changelog
* cleanup
* fix tests
* format description
* remove unused argument --inflate-off
* update --config description
* add requirements
* create temporary directory and clean up on exit
* add GENSCAN in keywords
* add set -e to test
* fix create temporary directory
* add set -eo pipefail to test
* add set -eo pipefail to script
* fix create temporary directory
* update --config description
* cleanup changelog
* cleanup changelog
* Update deprecated variable
---------
Co-authored-by: Robrecht Cannoodt <rcannood@gmail.com>
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2024-09-17 07:19:20 +00:00 |
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4b61e09a56
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Build branch main with version main (124d50c)
Build pipeline: viash-hub.biobox.main-pjlfn
Source commit: 124d50ce53
Source message: update changelog for viash 0.2.0
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2024-09-16 08:16:27 +00:00 |
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97f1502b57
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Build branch main with version main (fe56ee7)
Build pipeline: viash-hub.biobox.main-fjg6k
Source commit: fe56ee7c53
Source message: change output quant file to an optional argument (#151)
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2024-09-13 07:33:08 +00:00 |
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af89cea364
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Build branch main with version main (80aaf33)
Build pipeline: viash-hub.biobox.main-69lmq
Source commit: 80aaf333dc
Source message: Add Kallisto index (#149)
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2024-09-13 07:30:50 +00:00 |
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cccb2f63f6
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Build branch main with version main (bd8ca88)
Build pipeline: viash-hub.biobox.main-t28sb
Source commit: bd8ca889d1
Source message: Bcftools Concat (#145)
* Initial Commint
* Create help.txt
* Update config.vsh.yaml
* Update config.vsh.yaml
* Update config.vsh.yaml
* Update script.sh
* add template for tests
* Update test.sh
* small changes in config file
* adding more tests
* adding more test
* Update CHANGELOG.md
---------
Co-authored-by: Jakub Majercik <57993790+jakubmajercik@users.noreply.github.com>
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2024-09-10 14:36:19 +00:00 |
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2a330fe450
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Build branch main with version main (dc7b33d)
Build pipeline: viash-hub.biobox.main-62lvg
Source commit: dc7b33d51f
Source message: Bcftools Norm (#144)
* Initial Commit
* config and help.txt
* script.sh
* test template
* More tests and debugging
* test 5 and 6
* test 7, 8, 9
* Update test.sh
* fixing bug on config
* Changelog
* Update config.vsh.yaml
* Requested changes
* Bug fixing
---------
Co-authored-by: Jakub Majercik <57993790+jakubmajercik@users.noreply.github.com>
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2024-09-10 14:36:08 +00:00 |
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