Commit Graph

4 Commits

Author SHA1 Message Date
CI
f47054953e Build branch main with version main (38f635a)
Build pipeline: viash-hub.biobox.main-dz9k8

Source commit: 38f635ad57

Source message: Add agat convert genscan2gff (#100)

* add config

* add help

* add test data and expected output adn the script to obtain them

* add running script

* add test script

* update changelog

* cleanup

* fix tests

* format description

* remove unused argument --inflate-off

* update --config description

* add requirements

* create temporary directory and clean up on exit

* add GENSCAN in keywords

* add set -e to test

* fix create temporary directory

* add set -eo pipefail to test

* add set -eo pipefail to script

* fix create temporary directory

* update --config description

* cleanup changelog

* cleanup changelog

* Update deprecated variable

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Co-authored-by: Robrecht Cannoodt <rcannood@gmail.com>
2024-09-17 07:19:20 +00:00
CI
4b61e09a56 Build branch main with version main (124d50c)
Build pipeline: viash-hub.biobox.main-pjlfn

Source commit: 124d50ce53

Source message: update changelog for viash 0.2.0
2024-09-16 08:16:27 +00:00
CI
97f1502b57 Build branch main with version main (fe56ee7)
Build pipeline: viash-hub.biobox.main-fjg6k

Source commit: fe56ee7c53

Source message: change output quant file to an optional argument (#151)
2024-09-13 07:33:08 +00:00
CI
af89cea364 Build branch main with version main (80aaf33)
Build pipeline: viash-hub.biobox.main-69lmq

Source commit: 80aaf333dc

Source message: Add Kallisto index (#149)
2024-09-13 07:30:50 +00:00